GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002657-TA|BGIBMGA002657-PA|undefined
         (256 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-P...    29   6.3  

>AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-PA
            protein.
          Length = 1481

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)

Query: 76   LWAPAVPFSTTPACTVNTSSFSCHLHTNGAFTLERSKSDVQAYKHCRTEFIQKATFYTNE 135
            L  PA P     A T++ S++SC L      T  R+ SD+  Y+  R    Q+ T  +N 
Sbjct: 948  LLVPATPPQQHHARTLSDSNYSCQL----TDTSSRTSSDLDLYR--RRGQQQRCT--SNN 999

Query: 136  SKPKSEKDEECTF 148
            S P S ++E   F
Sbjct: 1000 SLPLSSENESVEF 1012


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.130    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,675,635
Number of Sequences: 52641
Number of extensions: 514351
Number of successful extensions: 1549
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1549
Number of HSP's gapped (non-prelim): 1
length of query: 256
length of database: 24,830,863
effective HSP length: 83
effective length of query: 173
effective length of database: 20,461,660
effective search space: 3539867180
effective search space used: 3539867180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)