Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002656-TA|BGIBMGA002656-PA|IPR009053|Prefoldin,
IPR013110|Histone methylation DOT1
(1114 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 28 0.31
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 28 0.31
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 28 0.31
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 28 0.31
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 26 1.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 26 1.6
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 1.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 1.6
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 26 1.6
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 23 8.8
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.31
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH+ E ++ R + S +A
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIA 886
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.31
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH+ E ++ R + S +A
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIA 886
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.31
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH+ E ++ R + S +A
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIA 886
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.31
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH+ E ++ R + S +A
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIA 886
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 26.2 bits (55), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 492 AERLHSELDIPRSPHTPYSLQLLLDMFRD-QYLAFIQRMNTPEYANEIR 539
A R H PR+P T L L FRD QYL+ +R E+++ +R
Sbjct: 108 ALRKHKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAER---AEFSSSLR 153
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 25.8 bits (54), Expect = 1.6
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH E ++ R + S +A
Sbjct: 577 QGEDRWLCTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWMPSTMA 626
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 1.6
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH E ++ R + S +A
Sbjct: 810 QGEDRWLCTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWMPSTMA 859
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 25.8 bits (54), Expect = 1.6
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 8 QATKRWVCDDLPEMKAALEYNILCDYDTHSYESMRALCDRFNRAIDSVVA 57
Q RW+C L + +EY+ D TH E ++ R + S +A
Sbjct: 810 QGEDRWLCTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWMPSTMA 859
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 25.8 bits (54), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 298 QRLKNPKLKGSHNGCEDGEGSGK-RNLSAPPTRQPTPDLLNGNSNHSTGS 346
+R K + + HN + E S K +N SAP + +P ++ N+N ST S
Sbjct: 120 RRAKCRQQQKQHNQQQSVEKSSKLKNKSAPILTKTSPTPVSINNNTSTSS 169
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 23.4 bits (48), Expect = 8.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 41 MRALCDRFNRAIDSVVALEKGTSLPAQRLNKYPSRGLLKHILQQTYNQAVADPEKLNQYE 100
++ + D+ NRA+ S A G P + Y G QQ ++ DP NQY
Sbjct: 393 VQPMIDQSNRAVFSPHAGPSGAYSPDGTMG-YMMDG------QQMMHRPPGDPAFHNQYA 445
Query: 101 PFSPEVYG 108
+ E YG
Sbjct: 446 HYPAEYYG 453
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,758
Number of Sequences: 317
Number of extensions: 8696
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 12
length of query: 1114
length of database: 114,650
effective HSP length: 64
effective length of query: 1050
effective length of database: 94,362
effective search space: 99080100
effective search space used: 99080100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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