Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002656-TA|BGIBMGA002656-PA|IPR009053|Prefoldin,
IPR013110|Histone methylation DOT1
(1114 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 42 4e-04
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 37 0.018
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.018
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 34 0.13
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 34 0.13
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.17
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 33 0.22
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 33 0.22
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 33 0.29
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 0.68
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 31 0.68
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 31 1.2
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 30 1.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 2.1
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 29 2.7
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 29 2.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 2.7
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 29 3.6
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 29 4.8
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 28 6.3
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 8.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 8.4
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 8.4
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/160 (22%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 540 NQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSEL----------GIHANNTV 589
+++ + KE N KL L +NV ISD+ +L +++EL N+ +
Sbjct: 850 SKVSELKEVNGKLSLDLKNLRSSLNVAISDNDQIL-TQLAELSKNYDSLEQESAQLNSGL 908
Query: 590 DLLAKAKEIV-GRHKELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQLGHVPHDA 648
L K+++ ++EL + KL ++ E++ + L K ++T + ++ ++ +
Sbjct: 909 KSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGK----KLTARQEEISNLKEE- 963
Query: 649 EVTQSIAQECILKEISATLAHRKRLHAQVGHLQNEITQME 688
++QS A + ++ TL+ +L A + HL+N+++++E
Sbjct: 964 NMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVE 1003
Score = 32.3 bits (70), Expect = 0.39
Identities = 31/171 (18%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 527 QRMNTPEYANEIRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHAN 586
+ M+ + +++++++ K+ KL++ L +++ + + ALL + + N
Sbjct: 963 ENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASNERLMDDLKN 1022
Query: 587 NTVDLLAKAKEIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQRTFE-ITEKYRQLGHVP 645
N ++ + EI + E SKL V S E E +L+ +T + + +K QL ++
Sbjct: 1023 NGENIASLQTEIEKKRAENDDLQSKL--SVVSSEYENLLLISSQTNKSLEDKTNQLKYIE 1080
Query: 646 HDAE--VTQSIAQECILKEISATLAHRKRLHAQVGHLQNEITQMERASEQK 694
+ + + + + L+E+++ +AQ+ ++E+ + + S+++
Sbjct: 1081 KNVQKLLDEKDQRNVELEELTSKYGKLGEENAQI---KDELLALRKKSKKQ 1128
Score = 29.9 bits (64), Expect = 2.1
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 480 QRLSALGVQLQPAERLHSELDIPRSPHTPY--SLQLLLDMFRDQYLAFIQRMNT-PEYAN 536
Q S+L + H EL+ T L + + F Q+ +T + N
Sbjct: 602 QNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENN 661
Query: 537 EIRNQIEKEKEKNHKLKSRASQLD---KQINVLISDSVALLKA-RMSELGIHANNTVDLL 592
++R ++ K +E N L + +D K I L D +A R S+L A N +++
Sbjct: 662 DLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKL--EAKNLREVI 719
Query: 593 AKAKEIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQRT 631
K G+H+ L+++ + L + ++ + A+L + T
Sbjct: 720 DNLK---GKHETLEAQRNDLHSSLSDAKNTNAILSSELT 755
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 36.7 bits (81), Expect = 0.018
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 24/236 (10%)
Query: 533 EYANEIRNQIEKEKEKNHKLKSRASQLD----KQINVLISDSVALLKARMSELGIHANNT 588
E +E +IEK KEK ++ D KQ ++ S L+ L +N
Sbjct: 264 ERRDENTKEIEKLKEKEGSIRRNLLAFDRKVRKQEKLIASKRPELISIAEKALE-SKSNL 322
Query: 589 VDLLAKAKEIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQLGHVPHDA 648
+ KA EI + + S L+ Q+ S+ A + +K + E+ + L +P D
Sbjct: 323 RKIQRKAAEIEKDYSDQASTLQVLENQLTSLSAAEKEFLKD--MQEKEQLKGLRLLPEDK 380
Query: 649 EVTQSIAQEC-------------ILKEISATLAHRKRLHAQVGHLQNEITQMERASEQKP 695
E + + E + + I T + L + VG L+++I + +
Sbjct: 381 EEYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSSLD 440
Query: 696 TTSSVPVTPVKMHAVNAKPRKREQRSRSQEWPEVPDIGKIEEQNPELLA--QKILE 749
T + + + + + K +Q+ + + E+ K +E N EL + QKILE
Sbjct: 441 TERADLLAKINEKIESLELEKHDQQKKRLTYSEL--FHKTQELNEELQSCLQKILE 494
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 526 IQRMNTPEYANEIRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHA 585
+ ++ T E E + + +N LK + + Q+NV D + LK ++ EL
Sbjct: 536 LDKLGTAEEIAEYKTKYNGAMLENKHLKEQVESMLSQLNVGPRDPMQFLKKQLDELKAEL 595
Query: 586 NNTVDLLAK-AKEIVGRHKELQSKASKLQAQVNSIE 620
N +LLA +E R++ +KLQ+Q+ ++
Sbjct: 596 NLRDNLLASMQREFETRYRAQIQAYNKLQSQMEHVQ 631
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 33.9 bits (74), Expect = 0.13
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 532 PEYANEIRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDL 591
PE + + + E+EK++ KL+ + Q K+ D++A + SE+ I D
Sbjct: 173 PEVRVKTKKEKEREKKEREKLRKKQQQAKKK-GSTGEDTLASSEV-SSEVDISTPAENDS 230
Query: 592 LAKAKEIVG-RHKELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQLGHVPHDAEV 650
AK K+ G + K A + + E+ +++ I E+ ++L AEV
Sbjct: 231 SAKGKQAAGSKRKGPNVTALQKMLEEKRAREEEEQRIREEEARIAEEEKRL------AEV 284
Query: 651 TQSIAQECILKEISATLAHRKRLHAQVGHLQNEITQMERASEQK 694
++ +E LK+ ++ + AQ +L + + + ++++
Sbjct: 285 EEARKEEARLKKKEKERKKKEEMKAQGKYLSKKQKEQQALAQRR 328
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 540 NQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLLAKAKEIV 599
N + EK N ++ R SQ + +V + D V + L +NT + + ++ +
Sbjct: 5 NLFQVEKGGNPEI-IRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQKEI 63
Query: 600 GRHKELQSKASKLQAQVNSIEAEQAVLVKQRTF---EITEKYRQLGHVPHDA 648
G + + AS+L + NS+ + L++Q T E+ +G++ HD+
Sbjct: 64 GLKMKAKEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSIGNIVHDS 115
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 33.5 bits (73), Expect = 0.17
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 544 KEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLLAKAKEIVGRH- 602
+E++K +L+S + L +NV DS+ + KA +S + K +E R
Sbjct: 94 QERKKRKELESAKNNL---LNVY--DSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQI 148
Query: 603 KELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQLGHVPHDAEVTQSIAQECILKE 662
+L + +L+ ++ +EAE +R TE+Y + E + + EC
Sbjct: 149 TDLLEEQQQLKLEIERLEAET-----ERANSETEQYEKQKEALE--EEYEELRNEC---- 197
Query: 663 ISATLAHRKRLHAQVGHLQNEITQMERASEQKPTTSSVPVTPVKMHAVNAKPRKREQRSR 722
L H +L A++ LQ+ ++ER ++ + + + P+K N+ K +
Sbjct: 198 ----LKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEKEKIMHA 253
Query: 723 SQEWPEVPDI-GKIEEQNPELLAQKILETGRQIE 755
++ + DI + +Q E L + ++ IE
Sbjct: 254 LEKAEKDADIYSEFIQQYMEQLESSLEKSSTAIE 287
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 33.1 bits (72), Expect = 0.22
Identities = 34/132 (25%), Positives = 51/132 (38%), Gaps = 6/132 (4%)
Query: 592 LAKAKEIVGRHKELQSKASKLQAQVNSI----EAEQAVLVKQRTFEITEKYRQLGHVPHD 647
L + KE +GR K S +L E+E V + Q T I+ R + + +
Sbjct: 133 LTEMKEALGRIKNELSTNERLDTSAREALVKQESELTVKIAQFTAAISNGIRSIQQLQNR 192
Query: 648 AEVTQSIAQECILKEISATLAHRKRLHAQVGHLQNEITQMERASEQ-KPTTSSVPVTPVK 706
+ + ++A+ RK A LQ Q ++ P TSSVP TPV
Sbjct: 193 QASSANGNNTGTSTPVNASTDTRKST-ASTPQLQQTQAQANAPQQRINPETSSVPETPVG 251
Query: 707 MHAVNAKPRKRE 718
+ A N E
Sbjct: 252 VSAANVSNESTE 263
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 538 IRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLLAKAKE 597
+++ E+EK N L R L+KQ N SD + ++ ++++L + + ++ ++E
Sbjct: 439 LKHNYEEEKSMNENLLVRIQTLEKQ-NTTKSDQIVSMQFQINDLNEQLRDLMFTISASQE 497
Query: 598 I--VGRHKELQS 607
I +G+ +ELQ+
Sbjct: 498 IQKMGQSEELQN 509
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 590 DLLAKAKEIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQLGHVPHDAE 649
DL K E ELQ K ++ Q NS++ ++ KQ + T +++ V ++ E
Sbjct: 70 DLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEVRNEKE 129
Query: 650 VTQSIAQECI---LKEISATLAHRKRLHAQVGHLQNEITQMERASEQKPT 696
TQ E + KEI+ ++ + +E+ +A + K T
Sbjct: 130 ATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKDT 179
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 31.5 bits (68), Expect = 0.68
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 548 KNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLLAKAKEIVG----RHK 603
+N+K K QLD + + + L + +L + + + A KE + +K
Sbjct: 1168 ENYKKKYEGLQLDLEGLKDVDTNFQELSKKHRDLTFNHESLLRQSASYKEKLSLASSENK 1227
Query: 604 ELQSKASKLQAQVNSI--EAEQAVLVKQRTFEITEKYRQLGHVPHDAEVTQSIAQEC--I 659
+L +K S L QVN + +A + ++++ + +Y QLG D + IA
Sbjct: 1228 DLSNKVSSLTKQVNELSPKASKVPELERKITNLMHEYSQLGKTFEDEKRKALIASRDNEE 1287
Query: 660 LKEISATLAHRKRLHAQVGHLQNEI 684
L+ + + L +++L + + E+
Sbjct: 1288 LRSLKSELESKRKLEVEYQKVLEEV 1312
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 31.5 bits (68), Expect = 0.68
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 533 EYANEIRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLL 592
EY NE+++ E+ +HK+K S+ + +I+ L + +LLK ++ E A+ + +
Sbjct: 295 EYKNELQSA---EEHFSHKIKELTSENELKISRLQEEKDSLLK-KVQE---GASLAMQRV 347
Query: 593 AKAKEIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQLGHVPHDAEVTQ 652
++ K LQS LQ + NS++ + L ++ E K + + Q
Sbjct: 348 QNKHDL--EKKRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSSLDQQSANVQ 405
Query: 653 SIAQECILKEISATLAHRKRLHAQVGHLQNEITQME 688
+ E + + +T+ K L V ++N+I ++E
Sbjct: 406 KL--ESTNRALESTI---KTLEEDVYTMKNKIIELE 436
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 30.7 bits (66), Expect = 1.2
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 509 YSLQLLLDMFRDQYLAFIQRMNTPEYANEIRNQIEKEKEKNHKLKSRASQL-DKQINVLI 567
Y L + + +DQ + R + +Y + K EK H L+ + L D Q+
Sbjct: 11 YELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAY 70
Query: 568 -SDSVALL--KARMSELGIHANNTVD-LLAKAKEIVGRHKELQSKASKLQAQVNSIEAEQ 623
S+ A L K R + VD L + ++ ++ +++ +LQ ++ +++ E
Sbjct: 71 DSERFAKLARKRREEAFNFQRKSMVDDLRERERQFYDSLEKKENERDRLQEKLRALQEES 130
Query: 624 AVLVKQRTFEITEKYRQLGHVPHD------AEVTQSIAQECILKEI-SATLAHRKRLHAQ 676
A L +QR + E+ Q + +E+ +SI K A+ + +++
Sbjct: 131 ANLRRQRENRLREEQEQSKRRKQETPSSKISELDRSIRIRWKRKYADQVNDAYLRSIYSS 190
Query: 677 VGHLQNEITQMERASEQKPTTSSVPVTPVK--MHAVNA-KPRK 716
G LQN + Q + + E+K S + + A+NA KP K
Sbjct: 191 FGTLQNVVIQKDISKEKKYVYSIIVFETLSSAYSAINAEKPSK 233
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 806 QKPLNVIGKVQESPKVINFED-RLKSIITSVLNEDQEQRKASRQVTPSSPYS 856
+K N ++QE + + E L+ + L E+QEQ K +Q TPSS S
Sbjct: 110 EKKENERDRLQEKLRALQEESANLRRQRENRLREEQEQSKRRKQETPSSKIS 161
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 497 SELDIPRSPHTPYSLQLLLDMFRDQYLAFIQRMNTPEYANEIRNQI---EKEKEKNHKLK 553
SEL++ + + +++ D Y I+ +T E +I N++ EK+KE+N LK
Sbjct: 145 SELELDANQRPVFPPKIISTEVIDNYFTDIKPRSTKEEREKIANELAHQEKQKERNKLLK 204
Query: 554 S 554
S
Sbjct: 205 S 205
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 533 EYANEIRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLL 592
E A + R +I + E H+L ++ + ++ + +S +K + S +G +
Sbjct: 926 EMAQKSRTEILEANEYLHQL----NEWNSELRIDVSTKFKCIKEKKSNIGEEVRI---IA 978
Query: 593 AKAKEIVGRHKELQSKASKLQAQVN--SIEAEQAVLVKQRTFEITEKYRQLGHVPHDAEV 650
+K + ++LQ + + L+ + S L++Q +T+K L HD
Sbjct: 979 SKIESTDDNLRKLQERLADLRTRERNASDNLRLRALMRQLEEAVTQKNYLLSQQSHDDRE 1038
Query: 651 TQSIAQECILKEISATLAHRKRLHAQVGHLQNEITQ 686
+ + + + A A R L + L+N IT+
Sbjct: 1039 SFRERMQILKSKYGALNAERAGLLGECKQLENSITK 1074
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 113 ELVCQMIDQIEISADDVFVDLGSGVGQVVLQMAAATPCRICLGVEKAEVPSKYAENMDLH 172
+L ++ +I +S+ D +DLG G G VL + CR +G++ + K A + L+
Sbjct: 20 KLTKDIVKRINLSSSDELLDLGCGDG--VLTNELVSQCRRVVGIDASPDMIKAARELGLN 77
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 3/124 (2%)
Query: 583 IHANNTVDLLAKAKEIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQRTFE-ITEKYRQL 641
I AN DLL +GR K L S L+ S + R++E + E Y
Sbjct: 360 IEANGHPDLLPALIRALGRAKRLNSCFQLLERYNLSDPTSDTSMTNVRSWEGLMEAYFDT 419
Query: 642 GHVPHDAEVTQSIAQECILKEI--SATLAHRKRLHAQVGHLQNEITQMERASEQKPTTSS 699
H + + +S ++ ++ S+ L R AQ+GH + + A E+ T +
Sbjct: 420 DHHVEASALMKSFFRKADSNQVIPSSILDCFLRRLAQLGHYKESAEWLGMAIEKISTYKA 479
Query: 700 VPVT 703
P T
Sbjct: 480 SPST 483
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 538 IRNQIEKEKEKNHKLKSRASQLDKQINVLISDSVALLKARM-SELGIHANNTVDLLAKAK 596
++ +IE K+ NH+L+ AS +QI + + K R EL N L ++A
Sbjct: 1456 MQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKERTEKELADSKNELEHLQSEAV 1515
Query: 597 EIVGRHKELQSKASKLQAQVNSIEAEQAVLVKQ 629
+ G+ ++ S L+ +++ + +++ LV+Q
Sbjct: 1516 DADGK-----TEISNLEKEIHELRSDKEGLVQQ 1543
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 603 KELQSKASKLQAQVNSIEAEQAVLVKQRTFEITEKYRQL-GHVPHDAEVTQSIAQECILK 661
KELQSK S+L+++ + + E A L K + YR L + D E T++ A + + K
Sbjct: 54 KELQSKLSELKSKYEAKDKEVAEL-KGSIRQSLADYRNLENRMKRDMEQTRAFAVQKLTK 112
Query: 662 EISATLAHRKR 672
++ ++ + +R
Sbjct: 113 DLLDSVDNLER 123
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 552 LKSRASQLDKQINVLISDSVALLKARMSELGIHANNTVDLLAKAKEIV 599
L S +Q D+ +L+ + +L+ + +H+N TV+L + K I+
Sbjct: 538 LASVLNQFDRYHRLLLEEGFSLILPEYYQYWLHSNQTVNLASGGKAII 585
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 497 SELDIPRSPHTPYSLQLLLDMFRDQYLAFIQRMNTPEYANEIRN-QIEK 544
S D P SP TP + Q D Y FIQR NTP N I Q+EK
Sbjct: 418 SSTDSPPSPSTPSNTQT------DSY--FIQRENTPTNHNSIPTIQLEK 458
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 805 SQKPLNVIGKVQESPKVINFEDRLKSIITSVLNE 838
SQK + I K++++P F D LK IT LNE
Sbjct: 38 SQKDVASIVKIEQTPSRPFFNDFLKKRITDSLNE 71
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 706 KMHAVNAKPRKREQRSRSQEWPEVPDIGKIEEQNPELLAQKILETGRQIEAGKVTKPNVI 765
++ + K +KR+++ + + E + E+ E AQK LE RQ EA K + +
Sbjct: 587 ELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRL 646
Query: 766 VNGYTRESERLDR 778
++ + L+R
Sbjct: 647 KREQEKKQQELER 659
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 678 GHLQNE---ITQMERASEQKPTTSSVPVTPVKMHAVNAKPRKREQRSR 722
G L +E I+ S + TT+ V ++ V + A A+P++R++ SR
Sbjct: 478 GELNDEEEVISSSNTPSTKAKTTNKVIISDVIIEATQAEPKRRQKNSR 525
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,450,633
Number of Sequences: 5004
Number of extensions: 170409
Number of successful extensions: 581
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 559
Number of HSP's gapped (non-prelim): 40
length of query: 1114
length of database: 2,362,478
effective HSP length: 80
effective length of query: 1034
effective length of database: 1,962,158
effective search space: 2028871372
effective search space used: 2028871372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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