GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002655-TA|BGIBMGA002655-PA|undefined
         (464 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79988-1|BAA11483.2| 2228|Homo sapiens KIAA0166 protein.               83   2e-15

>D79988-1|BAA11483.2| 2228|Homo sapiens KIAA0166 protein.
          Length = 2228

 Score = 83.4 bits (197), Expect = 2e-15
 Identities = 103/441 (23%), Positives = 177/441 (40%), Gaps = 30/441 (6%)

Query: 16   ELESWRLISQE-EPLLRTAHKCVRYIANMEWAGACLFYVLQGCSRGADQVAAAQLCYQFA 74
            + +S  LI++E   + +T   C+  I N EWA A    + Q    G+ +++A + C   A
Sbjct: 1675 QAKSSTLINKEITKITQTIESCLLSIVNPEWAVAIAISLAQDIPEGSFKISALKFCLYLA 1734

Query: 75   QRWAAFQPVNRAVRQ-----MERLHATL---STRHALYKIKWVSDELLRLTTEPAQLIQA 126
            +RW    P     R+     +++LH       T   L   K  ++E LR+  +PA LI +
Sbjct: 1735 ERWLQNIPSQDEKREKAEALLKKLHIQYRRSGTEAVLIAHKLNTEEYLRVIGKPAHLIVS 1794

Query: 127  LYLHPKFVDKMVHC------DINRAANEIADKNGINVSSIRIQXXXXXXXXXXXXXXXIN 180
            LY HP    ++ +       DI+ AA EIA+ N IN+  +                   +
Sbjct: 1795 LYEHPSINQRIQNSSGTDYPDIHAAAKEIAEVNEINLEKVWDMLLEKWLCPSTKPGEKPS 1854

Query: 181  NL-ALNTKE-LVTAKYILKATCPKMGAIYLSRIAFDDESDFNK-----CKKLRALQCFMS 233
             L  L   E L   +Y+L +      +  L   A    +           + RALQC   
Sbjct: 1855 ELFELQEDEALRRVQYLLLSRPIDYSSRMLFVFATSTTTTLGMHQLTFAHRTRALQCLFY 1914

Query: 234  VTDIETAIKVTNRNRDELWMSLLDLLFTTKLENVDMPWVIPTFMHD-KTRALELLLNAAK 292
            + D ET   +  +  +E+   L  + F    E +++P     F    K   ++ L     
Sbjct: 1915 LADKETIESLFKKPIEEVKSYLRCITFLASFETLNIPITYELFCSSPKEGMIKGLWKNHS 1974

Query: 293  GNTEALKITTQLATRYG--TPKVISEIMPLLLQTNLYD---EVLVLLLKSASNPPTSLIC 347
              + A+++ T+L   Y     ++ + ++  LL  N+     +VL  +    S        
Sbjct: 1975 HESMAVRLVTELCLEYKIYDLQLWNGLLQKLLGFNMIPYLRKVLKAISSIHSLWQVPYFS 2034

Query: 348  AAWRAVLLSPFQRADYPLTETQKERCLNAVNLLPVCPVIKDDDLIEIWKHCFRCK--CLG 405
             AW+ V+  P   A  PL+  Q   C  ++  +  CPV  D DLI + +   + +     
Sbjct: 2035 KAWQRVIQIPLLSASCPLSPDQLSDCSESLIAVLECPVSGDLDLIGVARQYIQLELPAFA 2094

Query: 406  IGCLTLPYMTAKTRQGLPELL 426
            + CL L   + K  Q +   L
Sbjct: 2095 LACLMLMPHSEKRHQQIKNFL 2115


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.134    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,936,589
Number of Sequences: 224733
Number of extensions: 2364450
Number of successful extensions: 7134
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7129
Number of HSP's gapped (non-prelim): 2
length of query: 464
length of database: 73,234,838
effective HSP length: 93
effective length of query: 371
effective length of database: 52,334,669
effective search space: 19416162199
effective search space used: 19416162199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 67 (31.1 bits)