Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002655-TA|BGIBMGA002655-PA|undefined
(464 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 24 3.1
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 24 3.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 3.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 3.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 4.1
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 23 5.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 5.4
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 23 5.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 9.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 9.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 9.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 9.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 9.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 9.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 9.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 9.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 9.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 9.5
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 9.5
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 81 QPVNRAVRQMERLHATLSTRHALYKIKWVSDELLRLTTE 119
Q +N+ +++E + T +T H+++ I DE LT+E
Sbjct: 90 QEINKPFKRLELFNITTTTIHSIHSID--GDEENGLTSE 126
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 391 LIEIWKHCFRCKCLGIGCLTLPYMTAKTRQGLP 423
L +W+ + C G G +PY G+P
Sbjct: 1 LANVWRFPYLCYKNGGGAFLIPYFLTLVLAGIP 33
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 394 IWKHCFRCKCLGIGCLTLPYMTAKTRQGLPELL 426
+W+ + C G G +PY A G+P L
Sbjct: 42 LWRFPYLCYKNGGGAFMVPYFIALALAGVPMFL 74
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 394 IWKHCFRCKCLGIGCLTLPYMTAKTRQGLPELL 426
+W+ + C G G +PY A G+P L
Sbjct: 95 LWRFPYLCYKNGGGAFMVPYFIALALAGVPMFL 127
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.4 bits (48), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 340 NPPTSLICAAWRAVLLSPFQRADYPLTETQKE--RCL 374
+P SL+C+ +V SP ++ PLT +++ +CL
Sbjct: 29 DPVKSLVCSPDLSVFTSPACGSETPLTNIEEKTYQCL 65
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/37 (21%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 386 IKDDDLIEIWKHCFRCKCLGIGCLTLPYMTAKTRQGL 422
+++D++++ WK F LG+ C+ + ++G+
Sbjct: 100 LQNDEVLD-WKKIFDINLLGLTCMIQEVLKLMKKKGI 135
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 122 QLIQALYLHPKFVDKMVHCDINRAAN 147
+LI +HPK +++++ D+N N
Sbjct: 1008 ELIYEYQIHPKTLNEVLQADMNALKN 1033
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 118 TEPAQLIQALYLHPKFVDK 136
T P +LI+ L HP+++D+
Sbjct: 334 TMPMELIENLRNHPEYIDE 352
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 6 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 44
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 6 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 44
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 6 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 44
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 6 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 44
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 239 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 277
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 239 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 277
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 239 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 277
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 239 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 277
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 239 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 277
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 6 RSEDGDSNKKELESWRLISQEEPLLRTAHKCVRYIANME 44
R + + KK+ +L +++E LL C RY + E
Sbjct: 228 RDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRE 266
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 114 LRLTTEPAQLIQALYLHPKFVDKMVHCDINRAANEIA 150
++ T EP + A + ++V HC I+ ++A
Sbjct: 178 IKRTYEPGMICGATIISKRYVLTAAHCIIDENTTKLA 214
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,058
Number of Sequences: 429
Number of extensions: 4252
Number of successful extensions: 30
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 19
length of query: 464
length of database: 140,377
effective HSP length: 60
effective length of query: 404
effective length of database: 114,637
effective search space: 46313348
effective search space used: 46313348
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)
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