Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002654-TA|BGIBMGA002654-PA|IPR014021|Helicase
superfamily 1 and 2 ATP-binding, IPR001650|Helicase, C-terminal,
IPR000629|ATP-dependent helicase, DEAD-box, IPR014001|DEAD-like
helicases, N-terminal, IPR011545|DEAD/DEAH box helicase, N-terminal
(607 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 123 3e-30
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 25 2.0
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 25 2.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 25 2.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 2.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 2.0
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 23 8.1
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 123 bits (297), Expect = 3e-30
Identities = 114/400 (28%), Positives = 182/400 (45%), Gaps = 53/400 (13%)
Query: 166 PFILNEHTLPKLFQPRDVCISAPTGSGKTLSFVIPIVQLLMKDVG-------CKIRALVV 218
P + ++ +P + RD+ A TGSGKT +F++PI+ L+ D C +V+
Sbjct: 181 PTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVI 240
Query: 219 L-PVQELAAQVAKVFKKYCNRTHLKVALLSGSVPFQQEQQELVRFTESVGWVSKVEIIVC 277
+ P +ELA Q+A KK+ + +KVA++ G ++ ++ I+V
Sbjct: 241 MSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTSTNHQRGRIL---------GGCHILVA 291
Query: 278 TAGRLVEHLKTTEGFNLQHLKFLVIDEADRIMDNIQNDWLYHVDHHIKQGSELMTGKVQS 337
T GRL + + + LK+ V+DEADR++D +L V+ + S TG+ Q+
Sbjct: 292 TPGRLKDFVNRGN-VSFNSLKYFVLDEADRMLDM---GFLGDVEEMLSHQSMPATGERQT 347
Query: 338 LNWKNVSKQKLAPQKLLFSATLSQDPEKLEQWGLFQPKLFSAATNECFEDEDQIRKYATP 397
L +FSAT ++ ++L G F N F + T
Sbjct: 348 L---------------MFSATFPEEVQQLA--GKF-------LLNYIFIAVGIVGSACTD 383
Query: 398 AELKEHYVVCEAENKPLVLYNFLVEQKWDKVLCFTNAAETTHRLTVLLNTWACKGLKVAE 457
E K V +K L + L + ++ L F L L+ + ++
Sbjct: 384 VEQKFFQV--SKFDKRSKLVSILEKAPNERTLIFVETKRNADFLATFLSE---QNIQSTS 438
Query: 458 LSAALDRSMRENVLKKFMLSEIDVLISTDALARGIDIPDCNYVISYDPPRNIKTYIHRVG 517
+ +S RE L F VL++T ARG+DI D +VI+YD P++I Y+HR+G
Sbjct: 439 IHGDRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIG 498
Query: 518 RTGRAGKIGKAVTVLLPSQ-ISLFKDLIK--AGGKEEIPE 554
RTGR G GKA + Q +L DL K + K+EIPE
Sbjct: 499 RTGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPE 538
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 1.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D++ ++KY T + HYV
Sbjct: 799 LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYV 833
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 1.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D++ ++KY T + HYV
Sbjct: 799 LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYV 833
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.4 bits (53), Expect = 1.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D++ ++KY T + HYV
Sbjct: 799 LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYV 833
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.4 bits (53), Expect = 1.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D++ ++KY T + HYV
Sbjct: 799 LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYV 833
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 24.6 bits (51), Expect = 2.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 13 NDDTHIIEQEAKRLEQLKQRIEERRKAFSVKKSSDVITLKEEK 55
N+ +I+ +++ LK+R + + SV ++DV EEK
Sbjct: 76 NEQFDVIKDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEK 118
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D+ ++KY T + +HYV
Sbjct: 225 LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 259
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D+ ++KY T + +HYV
Sbjct: 539 LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 573
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D+ ++KY T + +HYV
Sbjct: 772 LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 371 LFQPKLFSAATNECFEDEDQIRKYATPAELKEHYV 405
L P FS + D+ ++KY T + +HYV
Sbjct: 772 LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 22.6 bits (46), Expect = 8.1
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 194 TLSFVIPIVQLLMKDVGCKIRALVVLPVQELAAQVAKVFKK 234
T + ++P Q L+KD ++RA V++ + K ++
Sbjct: 281 TRTDLVPAFQNLLKDTEAEVRAAAANKVKDFCQNLDKAHQE 321
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,965
Number of Sequences: 317
Number of extensions: 5435
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 12
length of query: 607
length of database: 114,650
effective HSP length: 61
effective length of query: 546
effective length of database: 95,313
effective search space: 52040898
effective search space used: 52040898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
- SilkBase 1999-2023 -