Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002654-TA|BGIBMGA002654-PA|IPR014021|Helicase
superfamily 1 and 2 ATP-binding, IPR001650|Helicase, C-terminal,
IPR000629|ATP-dependent helicase, DEAD-box, IPR014001|DEAD-like
helicases, N-terminal, IPR011545|DEAD/DEAH box helicase, N-terminal
(607 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 69 8e-14
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 29 0.084
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 26 1.0
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 25 2.4
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 3.1
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 7.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 7.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 7.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 9.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 9.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 9.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 69.3 bits (162), Expect = 8e-14
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 467 RENVLKKFMLSEIDVLISTDALARGIDIPDCNYVISYDPPRNIKTYIHRVGRTGRAGKIG 526
RE L F + +L++T ARG+DI + ++VI+YD P+ I Y+HR+GRTGR G G
Sbjct: 490 REEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRG 549
Query: 527 KAVTVLLPSQ-ISLFKDLIK 545
+A + P + L DL++
Sbjct: 550 RATSFFDPEEDAPLRGDLVR 569
Score = 67.7 bits (158), Expect = 3e-13
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 29/187 (15%)
Query: 134 PVE--EQEWLHPVIKSTLLSEGITKLFPVQNQVVPFILNEHTLPKLFQPRDVCISAPTGS 191
P+E E L ++ + G K PVQ +P I+N RD+ A TGS
Sbjct: 194 PIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMN---------GRDLMACAQTGS 244
Query: 192 GKTLSFVIPI--------VQLLMKDVGCKIRALVVLPVQELAAQVAKVFKKYCNRTHLKV 243
GKT +F +PI V L++ C+ + ++V P +EL Q+ + K+ + LK
Sbjct: 245 GKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKT 304
Query: 244 ALLSGSVPFQQEQQELVRFTESVGWVSKVEIIVCTAGRLVEHLKTTEGFNLQHLKFLVID 303
+ G ++ +L S G I+V T GRL++ ++ ++FLV+D
Sbjct: 305 VVAYGGTSVMHQRGKL-----SAG----CHILVATPGRLLDFVEKGR-VKFSSVQFLVLD 354
Query: 304 EADRIMD 310
EADR++D
Sbjct: 355 EADRMLD 361
Score = 26.6 bits (56), Expect = 0.59
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 7 NRYNDTNDDTHIIEQEAKRLEQLKQRIEERRKAFSVKKSSDVITLKEEKQTEILPDLP 64
N N DD + + E R + R+K F+ ++ +D ++ K+ I P+LP
Sbjct: 104 NNKNKDGDDNN--DYEDNDYGNQDNRNDRRKKTFAAREDNDEEEAQKPKEQYIPPELP 159
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 29.5 bits (63), Expect = 0.084
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 167 FILN-EHTLPKLFQPRDVCISAPTGSGKTLSFVI 199
F LN H L ++ P D+ ++A TG+G +S V+
Sbjct: 161 FDLNTSHQLKQVVMPHDIAVNASTGNGGLVSLVV 194
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.8 bits (54), Expect = 1.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 119 SHPTVVSRDLNELSCPV--EEQEWLHPVIKSTLLSEGITKLFPVQNQVVPFILNEHT 173
S PT + R+LN +C E EW P I TL+ I + V V+ + HT
Sbjct: 38 SLPTKM-RELNATACAALYERVEWSGPWILVTLIVLAIVNVMVVLGNVLVILAVYHT 93
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 24.6 bits (51), Expect = 2.4
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Query: 20 EQEAKRLEQLKQRIEERRKAFSVKKSSDVITLKEEKQTE 58
EQ+ K +EQ+++R E+R + SD +T ++++Q +
Sbjct: 63 EQQRKEMEQMREREREQR------EHSDRVTSQQQQQQQ 95
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 24.2 bits (50), Expect = 3.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 180 PRDVCISAPTGSGKTLSFVIPIVQL 204
P D+ ++A TG G +S + + L
Sbjct: 172 PHDIAVNATTGKGGLVSLAVQAIDL 196
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.0 bits (47), Expect = 7.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 180 PRDVCISAPTGSGKTLSFVI 199
P DV ++A TG G+ S +
Sbjct: 171 PHDVAVNATTGKGRLSSLAV 190
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 7.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 180 PRDVCISAPTGSGKTLSFVI 199
P DV ++A TG G+ S +
Sbjct: 171 PHDVAVNATTGKGRLSSLAV 190
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 7.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 180 PRDVCISAPTGSGKTLSFVI 199
P DV ++A TG G+ S +
Sbjct: 171 PHDVAVNATTGKGRLSSLAV 190
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 9.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 520 GRAGKI-GKAVTVLLPSQISLFKDLIKAGGKEEI 552
G A KI A +V +P++I+ F D A KE++
Sbjct: 1261 GEASKIVALAPSVRVPAKIASFDDKFTATYKEDV 1294
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 9.6
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 250 VPFQQEQQELVRFTESVGWVSKVEIIVCTAGRLVEHLKTTEGFNLQHLKFLVIDEAD 306
VP + E ++ +GW+ + ++C G ++ TT G + + L+ E D
Sbjct: 515 VPVKYLTYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFRKLIRIEDD 571
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 9.6
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 250 VPFQQEQQELVRFTESVGWVSKVEIIVCTAGRLVEHLKTTEGFNLQHLKFLVIDEADRIM 309
VP + E ++ +GW+ + ++C G ++ TT G + + L+ RI
Sbjct: 568 VPVKYLTYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFRKLI-----RIE 622
Query: 310 DNI 312
DN+
Sbjct: 623 DNV 625
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,537
Number of Sequences: 429
Number of extensions: 6955
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 14
length of query: 607
length of database: 140,377
effective HSP length: 62
effective length of query: 545
effective length of database: 113,779
effective search space: 62009555
effective search space used: 62009555
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
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