GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002653-TA|BGIBMGA002653-PA|undefined
         (177 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL512385-2|CAH71730.1| 1072|Homo sapiens protein ( Human DNA seq...    32   1.3  
AL031230-1|CAI22601.1| 1072|Homo sapiens protein ( Human DNA seq...    32   1.3  
AB002317-1|BAA20777.2| 1109|Homo sapiens KIAA0319 protein.             32   1.3  
U71382-1|AAB70702.1|  440|Homo sapiens OB binding protein-1 prot...    29   6.7  
D86358-1|BAA24983.1|  442|Homo sapiens CD33L1 protein.                 29   6.7  
BC035359-1|AAH35359.2|  426|Homo sapiens sialic acid binding Ig-...    29   6.7  
AY040542-1|AAK83655.1|  442|Homo sapiens sialic acid binding imm...    29   6.7  

>AL512385-2|CAH71730.1| 1072|Homo sapiens protein ( Human DNA sequence
            from clone RP11-252E3 on chromosome 6. ).
          Length = 1072

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 44   IDDQADPEIVDFRP-IGTVSQGSDSDMSTAGSKRDLRGRLSDMFSRKQVSRGNRTKSRKA 102
            +D+  + E ++ RP  G   + ++ + S   S+ +       +FSR+++ RGN   S   
Sbjct: 998  LDNMDEQERMELRPKYGIKHRSTEHNSSLMVSESEFDSDQDTIFSREKMERGNPKVSMNG 1057

Query: 103  SKRNGKHY 110
            S RNG  +
Sbjct: 1058 SIRNGASF 1065


>AL031230-1|CAI22601.1| 1072|Homo sapiens protein ( Human DNA sequence
            from clone RP1-73M23 on chromosome 6p22.2-22.3. ).
          Length = 1072

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 44   IDDQADPEIVDFRP-IGTVSQGSDSDMSTAGSKRDLRGRLSDMFSRKQVSRGNRTKSRKA 102
            +D+  + E ++ RP  G   + ++ + S   S+ +       +FSR+++ RGN   S   
Sbjct: 998  LDNMDEQERMELRPKYGIKHRSTEHNSSLMVSESEFDSDQDTIFSREKMERGNPKVSMNG 1057

Query: 103  SKRNGKHY 110
            S RNG  +
Sbjct: 1058 SIRNGASF 1065


>AB002317-1|BAA20777.2| 1109|Homo sapiens KIAA0319 protein.
          Length = 1109

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 44   IDDQADPEIVDFRP-IGTVSQGSDSDMSTAGSKRDLRGRLSDMFSRKQVSRGNRTKSRKA 102
            +D+  + E ++ RP  G   + ++ + S   S+ +       +FSR+++ RGN   S   
Sbjct: 1035 LDNMDEQERMELRPKYGIKHRSTEHNSSLMVSESEFDSDQDTIFSREKMERGNPKVSMNG 1094

Query: 103  SKRNGKHY 110
            S RNG  +
Sbjct: 1095 SIRNGASF 1102


>U71382-1|AAB70702.1|  440|Homo sapiens OB binding protein-1
           protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 125 ADANLTRQTERILKYAIIECHSGDEKKRKITDTQY 159
           A+A    + E+ L YA++  H    ++ K+TDT+Y
Sbjct: 399 AEAGPISEDEQELHYAVLHFHKVQPQEPKVTDTEY 433


>D86358-1|BAA24983.1|  442|Homo sapiens CD33L1 protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 125 ADANLTRQTERILKYAIIECHSGDEKKRKITDTQY 159
           A+A    + E+ L YA++  H    ++ K+TDT+Y
Sbjct: 401 AEAGPISEDEQELHYAVLHFHKVQPQEPKVTDTEY 435


>BC035359-1|AAH35359.2|  426|Homo sapiens sialic acid binding
           Ig-like lectin 6 protein.
          Length = 426

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 125 ADANLTRQTERILKYAIIECHSGDEKKRKITDTQY 159
           A+A    + E+ L YA++  H    ++ K+TDT+Y
Sbjct: 385 AEAGPISEDEQELHYAVLHFHKVQPQEPKVTDTEY 419


>AY040542-1|AAK83655.1|  442|Homo sapiens sialic acid binding
           immunoglobulin-like lectin 6 protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 125 ADANLTRQTERILKYAIIECHSGDEKKRKITDTQY 159
           A+A    + E+ L YA++  H    ++ K+TDT+Y
Sbjct: 401 AEAGPISEDEQELHYAVLHFHKVQPQEPKVTDTEY 435


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.130    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,775,152
Number of Sequences: 224733
Number of extensions: 758165
Number of successful extensions: 1610
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1606
Number of HSP's gapped (non-prelim): 7
length of query: 177
length of database: 73,234,838
effective HSP length: 85
effective length of query: 92
effective length of database: 54,132,533
effective search space: 4980193036
effective search space used: 4980193036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 62 (29.1 bits)