Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002650-TA|BGIBMGA002650-PA|IPR000891|Pyruvate
carboxyltransferase
         (147 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   0.43 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.57 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.57 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   3.0  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   3.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   5.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   9.3  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 38  LHFHDTYGQGLSNLLAGLE--FGIKTVDSSI---SGLGGCPYARGASGNLATEDLVYFL 91
           +HFHD  G  + +++ GL    G  T+   I     +     A GASGN+    L+ F+
Sbjct: 194 VHFHDYTGSVVIHVVGGLTGLIGCLTLGRRILRLDAIDEASIAVGASGNVFAGYLLVFI 252


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/25 (36%), Positives = 18/25 (72%)

Query: 93  GLGVNTDVDLVKIIEAGRYISNFLG 117
           G+  + +VD +  + +G+YIS+F+G
Sbjct: 250 GMKESVEVDQLSWLGSGQYISDFVG 274


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/25 (36%), Positives = 18/25 (72%)

Query: 93  GLGVNTDVDLVKIIEAGRYISNFLG 117
           G+  + +VD +  + +G+YIS+F+G
Sbjct: 288 GMKESVEVDQLSWLGSGQYISDFVG 312


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/18 (33%), Positives = 15/18 (83%)

Query: 99  DVDLVKIIEAGRYISNFL 116
           D+D+ +I++ GR ++N++
Sbjct: 27  DMDIDRILQNGRILTNYI 44


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/18 (33%), Positives = 15/18 (83%)

Query: 99  DVDLVKIIEAGRYISNFL 116
           D+D+ +I++ GR ++N++
Sbjct: 27  DMDIDRILQNGRILTNYI 44


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 26  EILTVAKPEQLALHFHDTYGQGLSNLLAGLEFGI 59
           E + +A PE + LHF  T    ++ LL G   GI
Sbjct: 192 EFVCIATPEAIELHF-TTDHPSVAYLLVGSLKGI 224


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 62  VDSSISGLGGCPYARGASGNLA 83
           VD++ +G   C Y    +GN+A
Sbjct: 138 VDAATAGDKSCRYTASLAGNVA 159


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 99  DVDLVKIIEAGRYISNFLGKPTESKVN 125
           +VD+ +I+   + + NF  K    KVN
Sbjct: 579 EVDVEEILGEAKVLQNFDIKDKNKKVN 605


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.139    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,239
Number of Sequences: 429
Number of extensions: 1403
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 147
length of database: 140,377
effective HSP length: 52
effective length of query: 95
effective length of database: 118,069
effective search space: 11216555
effective search space used: 11216555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)