Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002649-TA|BGIBMGA002649-PA|IPR011030|Lipovitellin,
superhelical, IPR000357|HEAT, IPR013932|TATA-binding protein
interacting (TIP20)
(1273 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 409 e-114
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 409 e-114
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 37 0.11
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 35 0.43
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 33 1.7
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 31 4.0
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 31 5.3
Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical pr... 31 5.3
AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical ... 31 7.0
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 30 9.2
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 30 9.2
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 30 9.2
Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical pr... 30 9.2
AL132862-13|CAB60543.1| 385|Caenorhabditis elegans Hypothetical... 30 9.2
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 409 bits (1006), Expect = e-114
Identities = 241/673 (35%), Positives = 377/673 (56%), Gaps = 16/673 (2%)
Query: 606 RLRATDMDQEVKERAIAACGQLLCHFGDYLQNELPVCLPIFLERLRNEITRLTTVKALTK 665
+ A D DQEV+ERAI+A LL F D L+NE P L ER+ ++T L +A T
Sbjct: 602 KFMANDTDQEVRERAISAISMLLAAFKDVLKNETPAILEKMTERIGRDMTCLVAFRASTH 661
Query: 666 VASSPLRIDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNY-SHAISIELLSKV 724
+ + + + S ++ +++K R+ ++ + +I +E L+ V
Sbjct: 662 IVEAGIIFSSAQLQSILRHVV-DYVKKIARSLRMTCLNFVEKLMKHSPAGSIPVEELTCV 720
Query: 725 LMEVPALVCEQDLHCAQTALALVRSACLRCPAALTADARYALTPKILALAKSPLLQGGAL 784
L E+ L+ E DL A + A L P ++ + L I+ L SPL+QG AL
Sbjct: 721 LGEMSNLISETDLQITNQAFCCLTYAFLNFPTCVSLHMQPILD-SIIRLLTSPLIQGLAL 779
Query: 785 KAMLGVLSALVSADVAGCSRRE-LLALLVMPVRRLQEHNATAHHIKQAFHSLSKCXXXXX 843
++L + +A+V D E LL + PV ++ A + H A S +
Sbjct: 780 NSLLNLFTAIVKTDFPEKPTFESLLDSVTSPV---YDNVALSRHAHMAIASCAAVITEST 836
Query: 844 XXXXXXXXXXXRGFLRDAAHPPSDAHHMFSLLALAEIGRHLDLSSVPNL----KEVLLNS 899
+ + SD+ +F+++ L E+GR + + P+ +++ + +
Sbjct: 837 QNLEKSRSLAKKLAQQLQTANMSDSIRLFAMITLGELGRRVPDTYSPDFPVKPEDLAIKA 896
Query: 900 FTPSSEEVKSAASYALGSVAVGNLPEFLPFILGEIEAQPKRQYLLLHSLREIISSESCTP 959
F E++KSAA+ ALG++AVGNL +LPFIL +I QPK+QYLLLH+L+E+I ES +
Sbjct: 897 FNHHHEDLKSAAAQALGALAVGNLNVYLPFILEQIRTQPKKQYLLLHALKEVIVWESSSE 956
Query: 960 EGVEA---LRPFIPQIWVQLSKHCQCAEEGSRNVVAXXXXXXXXXXXXXXXXXXXXXXKS 1016
E ++ R I IW L + E+G+R+VVA +S
Sbjct: 957 ESTKSTDLFRSAIVDIWGMLMANAGGNEDGTRSVVAECLGRLCSFDPESLLPKLKESMRS 1016
Query: 1017 PEPLTRTTAVTAVKFTISDQPQAIDGLLRGCMCELLVPLRDAELGVRRVALVAFNSAAHN 1076
+P R++AV+A+K+ I+D+ + +D L+ + + L +RD +L VRRVALV NSAAHN
Sbjct: 1017 SDPAIRSSAVSAIKYMINDEKRIVDITLQKQIGDFLAAVRDEDLKVRRVALVVLNSAAHN 1076
Query: 1077 KPSLVRDLLPQVLPTIYAETKVKKELIREVEMGPFKHSVDDGLDLRKAAFECMYTLLGTC 1136
KP+LVRDLLP +LP +Y ETK++KELI+EVEMGPFKH VD+GLDLRK AFECM+TLL +C
Sbjct: 1077 KPALVRDLLPDLLPAVYEETKLRKELIKEVEMGPFKHQVDEGLDLRKCAFECMFTLLESC 1136
Query: 1137 LDRLDVFEFLRHVEDGLRD-HYDIKMLTYLMCARLAQLCPAVVLQRLESLVEPLRATCTM 1195
+D++D+ +F +E GL D ++D+K+L YL R+A L P VLQR++ + EPL+ +
Sbjct: 1137 VDKIDITQFSSVMEVGLSDQNHDVKLLNYLTLQRVANLAPGQVLQRIDRVCEPLKTQLNV 1196
Query: 1196 KVKANSVKQEYEKQDELKRSALRATAAL-MQIPEADKNPHLMDFVTQIRSLPELQPIFES 1254
+ + N+VKQE EK +ELK++ +R L +++PE ++NP +D I+ EL+ +
Sbjct: 1197 RPRGNAVKQEVEKLEELKKAVIRVVYGLKLKLPEVERNPQFLDLYNTIKHTKELEALAND 1256
Query: 1255 ILKDSSGAAGLDS 1267
+LK+S A D+
Sbjct: 1257 VLKESQRAVVYDT 1269
Score = 248 bits (606), Expect = 3e-65
Identities = 143/417 (34%), Positives = 226/417 (54%), Gaps = 27/417 (6%)
Query: 5 SYHIAHLLEKMTSNDKDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEV 64
+YH+ L++KM++ DKDFRFMA NDLM +LQ +I L+DDS +V++ L++LL D NGEV
Sbjct: 3 AYHVGQLVDKMSNPDKDFRFMACNDLMKDLQTGTIALEDDSTAKVIRALIKLLSDSNGEV 62
Query: 65 QNLAVKCLGPLV--NKVKEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISEL-PLGS 121
QNLA+KC+G L +K+K + +E +V+ L ++ S EQ RDI S+ LK +I L P S
Sbjct: 63 QNLAIKCIGLLAQPSKIKTHHLEYLVEELTPHVFSKAEQSRDIHSLTLKAMILNLAPSAS 122
Query: 122 NTLAANVCKKITGKLSSAIEK-QEDVSVQLEALDILADLLSRFGGLLISFHPMLLNSLLP 180
+ V K++ K ++ D + +++ LD++ ++L RFG ++ H L ++
Sbjct: 123 SNATTTVVKRMLPKFVDSLSLCAPDDAARVDVLDLIGEVLLRFGDVVPEMHKGSLKVMVD 182
Query: 181 QLASPRQAVRKRTIVALSHLVMSCNASLYNKLIDHLLEGL------XXXXXXXXXRTHIQ 234
L S R A+RK+ I + HL N LY++L+ LL+ L RT +
Sbjct: 183 HLYSFRSAIRKKAITGIGHLASVINGELYDELVQDLLKELAQRSPPSSAAQNVQLRTLVI 242
Query: 235 CIASICRQAGHRFGEQLWRVAPSVLEY------SKDTDEELREHCLQALEAFVLKCPKEV 288
++++ R +G RF + +V P +L+Y ++ ++LRE +Q LE F+ + P+EV
Sbjct: 243 ALSTVARASGSRFSKHTPKVVPFLLQYLQIDPGTESEHDDLREASIQGLEVFLYRNPQEV 302
Query: 289 QPHIPTIIDLCLKMITYDPNYNYXXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXM 348
+I + YDPNY Y +
Sbjct: 303 VAFEKEVIQQLTDALAYDPNYEY-----------GDDDEDEQMEDDEDDDEDEYSDDEDV 351
Query: 349 SWKVRRAAAKCLESVIATRHELLAEMYHTVSPALIARFKEREENVKCDILSAYTALL 405
+WKVRRAAAK +E++I++ E L + + P +I RFKEREE V+ +I+S Y ALL
Sbjct: 352 TWKVRRAAAKAIEAMISSHRESLLNLSQKIGPVVIGRFKEREETVRTEIISVYIALL 408
Score = 39.1 bits (87), Expect = 0.020
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 467 PGCLSDHVARVVRALTPALLDKTTASSMKIETLVFIG-CLVRGQGAGMREHXXXXXXXXX 525
P L D + ++ A++ L DK ++ K+ L FI L +
Sbjct: 496 PSGLEDSLDDIIPAVSNILTDKNASAQGKMTVLSFISNALTLNNPKRFKNLLSPLTTIMT 555
Query: 526 XSVHDPFYKVTAEALRVLQLLVKIMRPL 553
S+ +PFYKV+AE L V + ++R L
Sbjct: 556 HSISEPFYKVSAEGLAVCCKYIDVLREL 583
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 409 bits (1006), Expect = e-114
Identities = 241/673 (35%), Positives = 377/673 (56%), Gaps = 16/673 (2%)
Query: 606 RLRATDMDQEVKERAIAACGQLLCHFGDYLQNELPVCLPIFLERLRNEITRLTTVKALTK 665
+ A D DQEV+ERAI+A LL F D L+NE P L ER+ ++T L +A T
Sbjct: 602 KFMANDTDQEVRERAISAISMLLAAFKDVLKNETPAILEKMTERIGRDMTCLVAFRASTH 661
Query: 666 VASSPLRIDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNY-SHAISIELLSKV 724
+ + + + S ++ +++K R+ ++ + +I +E L+ V
Sbjct: 662 IVEAGIIFSSAQLQSILRHVV-DYVKKIARSLRMTCLNFVEKLMKHSPAGSIPVEELTCV 720
Query: 725 LMEVPALVCEQDLHCAQTALALVRSACLRCPAALTADARYALTPKILALAKSPLLQGGAL 784
L E+ L+ E DL A + A L P ++ + L I+ L SPL+QG AL
Sbjct: 721 LGEMSNLISETDLQITNQAFCCLTYAFLNFPTCVSLHMQPILD-SIIRLLTSPLIQGLAL 779
Query: 785 KAMLGVLSALVSADVAGCSRRE-LLALLVMPVRRLQEHNATAHHIKQAFHSLSKCXXXXX 843
++L + +A+V D E LL + PV ++ A + H A S +
Sbjct: 780 NSLLNLFTAIVKTDFPEKPTFESLLDSVTSPV---YDNVALSRHAHMAIASCAAVITEST 836
Query: 844 XXXXXXXXXXXRGFLRDAAHPPSDAHHMFSLLALAEIGRHLDLSSVPNL----KEVLLNS 899
+ + SD+ +F+++ L E+GR + + P+ +++ + +
Sbjct: 837 QNLEKSRSLAKKLAQQLQTANMSDSIRLFAMITLGELGRRVPDTYSPDFPVKPEDLAIKA 896
Query: 900 FTPSSEEVKSAASYALGSVAVGNLPEFLPFILGEIEAQPKRQYLLLHSLREIISSESCTP 959
F E++KSAA+ ALG++AVGNL +LPFIL +I QPK+QYLLLH+L+E+I ES +
Sbjct: 897 FNHHHEDLKSAAAQALGALAVGNLNVYLPFILEQIRTQPKKQYLLLHALKEVIVWESSSE 956
Query: 960 EGVEA---LRPFIPQIWVQLSKHCQCAEEGSRNVVAXXXXXXXXXXXXXXXXXXXXXXKS 1016
E ++ R I IW L + E+G+R+VVA +S
Sbjct: 957 ESTKSTDLFRSAIVDIWGMLMANAGGNEDGTRSVVAECLGRLCSFDPESLLPKLKESMRS 1016
Query: 1017 PEPLTRTTAVTAVKFTISDQPQAIDGLLRGCMCELLVPLRDAELGVRRVALVAFNSAAHN 1076
+P R++AV+A+K+ I+D+ + +D L+ + + L +RD +L VRRVALV NSAAHN
Sbjct: 1017 SDPAIRSSAVSAIKYMINDEKRIVDITLQKQIGDFLAAVRDEDLKVRRVALVVLNSAAHN 1076
Query: 1077 KPSLVRDLLPQVLPTIYAETKVKKELIREVEMGPFKHSVDDGLDLRKAAFECMYTLLGTC 1136
KP+LVRDLLP +LP +Y ETK++KELI+EVEMGPFKH VD+GLDLRK AFECM+TLL +C
Sbjct: 1077 KPALVRDLLPDLLPAVYEETKLRKELIKEVEMGPFKHQVDEGLDLRKCAFECMFTLLESC 1136
Query: 1137 LDRLDVFEFLRHVEDGLRD-HYDIKMLTYLMCARLAQLCPAVVLQRLESLVEPLRATCTM 1195
+D++D+ +F +E GL D ++D+K+L YL R+A L P VLQR++ + EPL+ +
Sbjct: 1137 VDKIDITQFSSVMEVGLSDQNHDVKLLNYLTLQRVANLAPGQVLQRIDRVCEPLKTQLNV 1196
Query: 1196 KVKANSVKQEYEKQDELKRSALRATAAL-MQIPEADKNPHLMDFVTQIRSLPELQPIFES 1254
+ + N+VKQE EK +ELK++ +R L +++PE ++NP +D I+ EL+ +
Sbjct: 1197 RPRGNAVKQEVEKLEELKKAVIRVVYGLKLKLPEVERNPQFLDLYNTIKHTKELEALAND 1256
Query: 1255 ILKDSSGAAGLDS 1267
+LK+S A D+
Sbjct: 1257 VLKESQRAVVYDT 1269
Score = 248 bits (606), Expect = 3e-65
Identities = 143/417 (34%), Positives = 226/417 (54%), Gaps = 27/417 (6%)
Query: 5 SYHIAHLLEKMTSNDKDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEV 64
+YH+ L++KM++ DKDFRFMA NDLM +LQ +I L+DDS +V++ L++LL D NGEV
Sbjct: 3 AYHVGQLVDKMSNPDKDFRFMACNDLMKDLQTGTIALEDDSTAKVIRALIKLLSDSNGEV 62
Query: 65 QNLAVKCLGPLV--NKVKEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISEL-PLGS 121
QNLA+KC+G L +K+K + +E +V+ L ++ S EQ RDI S+ LK +I L P S
Sbjct: 63 QNLAIKCIGLLAQPSKIKTHHLEYLVEELTPHVFSKAEQSRDIHSLTLKAMILNLAPSAS 122
Query: 122 NTLAANVCKKITGKLSSAIEK-QEDVSVQLEALDILADLLSRFGGLLISFHPMLLNSLLP 180
+ V K++ K ++ D + +++ LD++ ++L RFG ++ H L ++
Sbjct: 123 SNATTTVVKRMLPKFVDSLSLCAPDDAARVDVLDLIGEVLLRFGDVVPEMHKGSLKVMVD 182
Query: 181 QLASPRQAVRKRTIVALSHLVMSCNASLYNKLIDHLLEGL------XXXXXXXXXRTHIQ 234
L S R A+RK+ I + HL N LY++L+ LL+ L RT +
Sbjct: 183 HLYSFRSAIRKKAITGIGHLASVINGELYDELVQDLLKELAQRSPPSSAAQNVQLRTLVI 242
Query: 235 CIASICRQAGHRFGEQLWRVAPSVLEY------SKDTDEELREHCLQALEAFVLKCPKEV 288
++++ R +G RF + +V P +L+Y ++ ++LRE +Q LE F+ + P+EV
Sbjct: 243 ALSTVARASGSRFSKHTPKVVPFLLQYLQIDPGTESEHDDLREASIQGLEVFLYRNPQEV 302
Query: 289 QPHIPTIIDLCLKMITYDPNYNYXXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXM 348
+I + YDPNY Y +
Sbjct: 303 VAFEKEVIQQLTDALAYDPNYEY-----------GDDDEDEQMEDDEDDDEDEYSDDEDV 351
Query: 349 SWKVRRAAAKCLESVIATRHELLAEMYHTVSPALIARFKEREENVKCDILSAYTALL 405
+WKVRRAAAK +E++I++ E L + + P +I RFKEREE V+ +I+S Y ALL
Sbjct: 352 TWKVRRAAAKAIEAMISSHRESLLNLSQKIGPVVIGRFKEREETVRTEIISVYIALL 408
Score = 39.1 bits (87), Expect = 0.020
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 467 PGCLSDHVARVVRALTPALLDKTTASSMKIETLVFIG-CLVRGQGAGMREHXXXXXXXXX 525
P L D + ++ A++ L DK ++ K+ L FI L +
Sbjct: 496 PSGLEDSLDDIIPAVSNILTDKNASAQGKMTVLSFISNALTLNNPKRFKNLLSPLTTIMT 555
Query: 526 XSVHDPFYKVTAEALRVLQLLVKIMRPL 553
S+ +PFYKV+AE L V + ++R L
Sbjct: 556 HSISEPFYKVSAEGLAVCCKYIDVLREL 583
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 36.7 bits (81), Expect = 0.11
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 592 LKQFIPAMYECNLVRLRATDMDQEVKERAIAACG---QLLCHFGDYLQNELPVCLPI 645
+K+ + M CN+ RL +D Q K+ ++A C Q++ H+ + + + PVC P+
Sbjct: 449 MKEVLTHMTSCNVGRLCHSDTTQTTKKCSVAHCASSRQIIAHWKNCSREDCPVCKPL 505
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 34.7 bits (76), Expect = 0.43
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 140 IEKQEDVSVQLEALDILADLLSRFGGLLISFHPMLLNSLLPQLASPRQAVRKRTIVALSH 199
I K+ D +V+L LD L L I L+ +L L+SP VRK+T+
Sbjct: 290 IVKESDNNVKLIVLDRLVALRGSSSNEKIL--QGLVMDILRVLSSPGLEVRKKTLSLALD 347
Query: 200 LVMSCNASLYNKLIDHLLEGLXXXXXXXXXRTHIQCIASICRQAGHRFGEQLWRVAPSVL 259
LV S N + + + + + ++ A +F + + P ++
Sbjct: 348 LVSSRNVEDMVMFLKKEINKTATESNDENGKYRQELVKTL-HAATIKFPDVASTIVPVLM 406
Query: 260 EYSKDTDEELREHCLQALEAFVLKCP 285
E+ DT+E+ + LQ + V K P
Sbjct: 407 EFLSDTNEKASSYVLQFVREAVHKLP 432
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
ZK430.1 protein.
Length = 1650
Score = 32.7 bits (71), Expect = 1.7
Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 2/140 (1%)
Query: 113 VISELPLGSNTLAANVCKKITGKLSSAIEKQEDVSVQLEALDILADLLSRFGGLLISFHP 172
VIS + + C+ ++ + + + + + D L + R G P
Sbjct: 1507 VISNAARHRDFFTVDRCQLVSDVIVNELVNTKVEGHEKRCSDHLVPAIYRIGNADPDSFP 1566
Query: 173 MLLNSLLPQLASPRQAVRKRTIVALSHLVMSCNASLYNKLIDHLLEGLXXXXXXXXXRTH 232
LLN ++ + R +R R ++ L L+ + L LL L +
Sbjct: 1567 ELLNKIMLKTRDSRAKIRYRALIVLELLIKEIGDGVQPHL-SILLPFLNELIEDENKQVE 1625
Query: 233 IQCIASICRQAGHRFGEQLW 252
QC + H+FGE W
Sbjct: 1626 AQC-QKVINSLQHKFGETFW 1644
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 31.5 bits (68), Expect = 4.0
Identities = 60/295 (20%), Positives = 125/295 (42%), Gaps = 20/295 (6%)
Query: 11 LLEKMTSNDKDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEVQNLAVK 70
L+E R+M L+ E+Q ++ +D +V M LL+D GEV+ A +
Sbjct: 250 LIELFDDKSWRVRYMVAEKLI-EIQ--NVLGEDMDTTHLVNMYTNLLKDPEGEVRCAATQ 306
Query: 71 CLGPLVNKVKEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISELPLGSNTLAANVCK 130
L + E + + I+ C ++L+ ++L + +K+ ++ + +G L +
Sbjct: 307 RLQEFALNLPEDKRQNII---CNSLLNVAKELVTDGNQLVKSELAGVIMGLAPLIGKE-Q 362
Query: 131 KITGKLSSAIEKQEDVSVQLEALDILADLLSRFGGLLISFHPMLLNSLLPQLASPRQAVR 190
++ L ++ D + ++ L+I++ L + ++ + L SLLP + + +
Sbjct: 363 TVSELLPIYMQLLNDQTPEVR-LNIISS-LDKVNEVIGA--AQLSTSLLPAIVGLAEDGK 418
Query: 191 KRTIVALSHLVMSCNASLYNKLIDHLLEGLXXXXXXXXXRTHIQCIASICRQAGHRFGEQ 250
R +A+ + + L + D L L + + I ++ +FG Q
Sbjct: 419 WRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHVFSIREASTLIMKELTQKFGGQ 478
Query: 251 LW---RVAPSVLEYSKDTDEELREHCLQAL----EAFVL-KCPKEVQPHIPTIID 297
W + P + + KDT+ R CL L EA + KE+ P + +++
Sbjct: 479 -WASTNIVPKMQKLQKDTNYLQRMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVE 532
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 29 DLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEVQNLAVK 70
DL E+QK K+ DDS+ V+ L +L KNG+ L +K
Sbjct: 17 DLDEEIQKIKQKMIDDSQSVVLANQLLILLRKNGDFDELDIK 58
>Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical protein
C14B1.10 protein.
Length = 591
Score = 31.1 bits (67), Expect = 5.3
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 1164 YLMCARLAQLCPAVVLQRLESLVEPLRATCTMKVKANSVKQEYEKQDELKRSALRATAAL 1223
YL+ + + LC V L+ LE + PL V N + + +++S T
Sbjct: 47 YLLVSNSSILC-GVSLEELEEIFLPLDELAEFIVYPNKRSYSFVQCSSIEKSIQVRTELH 105
Query: 1224 MQIPEADKNPHLMDFVTQIRSLPE 1247
IP + KN H ++ + +LPE
Sbjct: 106 GLIPPSLKNSHQPFAISYVENLPE 129
>AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical
protein C33E10.8 protein.
Length = 303
Score = 30.7 bits (66), Expect = 7.0
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 39 IKLDDDSEREVVKMLLRL-LEDKNGEVQNLAVKCLGPLVNKVKEYQVEGIVDTLCANMLS 97
I+++++ E VK+ + L ++ NG++ +L VK L ++ +VD + A
Sbjct: 214 IEMNNEMMPETVKLYVTLWIKGANGQLSSLRVKLYNRLYRNTDQFFFVLLVDYMFAGFEK 273
Query: 98 DTEQLRDISSIGLKTVISEL 117
+ Q + +I KT + L
Sbjct: 274 EGRQDYSVQNIAGKTALGSL 293
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 9.2
Identities = 23/108 (21%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 20 KDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKV 79
K R ++ + E+++ ++ + DS+ +VVK ++E + +Q + L L
Sbjct: 1145 KTIRVLSEQIKVLEIEQKNLSQNKDSQ-QVVK---EMIESERERLQQIVH--LNELQKLT 1198
Query: 80 KEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISELPLGSNTLAAN 127
++Y++ I+D L + + R+ G++ +I++L + + AAN
Sbjct: 1199 RKYRLSSIIDQLAYVSEATRKTSREAEPDGIRYIINQLTVLRDDEAAN 1246
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 9.2
Identities = 23/108 (21%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 20 KDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKV 79
K R ++ + E+++ ++ + DS+ +VVK ++E + +Q + L L
Sbjct: 1145 KTIRVLSEQIKVLEIEQKNLSQNKDSQ-QVVK---EMIESERERLQQIVH--LNELQKLT 1198
Query: 80 KEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISELPLGSNTLAAN 127
++Y++ I+D L + + R+ G++ +I++L + + AAN
Sbjct: 1199 RKYRLSSIIDQLAYVSEATRKTSREAEPDGIRYIINQLTVLRDDEAAN 1246
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 9.2
Identities = 23/108 (21%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 20 KDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKV 79
K R ++ + E+++ ++ + DS+ +VVK ++E + +Q + L L
Sbjct: 1145 KTIRVLSEQIKVLEIEQKNLSQNKDSQ-QVVK---EMIESERERLQQIVH--LNELQKLT 1198
Query: 80 KEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISELPLGSNTLAAN 127
++Y++ I+D L + + R+ G++ +I++L + + AAN
Sbjct: 1199 RKYRLSSIIDQLAYVSEATRKTSREAEPDGIRYIINQLTVLRDDEAAN 1246
>Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical protein
D2045.2 protein.
Length = 1792
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 132 ITGKLSSAIEKQEDVSVQLEALDILADLLSRFGGLLISFHPM---LLNSLLPQLASPRQA 188
+T K++ + S + A + L R LL+ P L ++L+P + +
Sbjct: 1316 MTPKIADTLRSSVGTSTRSSAAQFVTQLALRAPQLLVDHTPQCDKLFSALIPGVRDRNPS 1375
Query: 189 VRKRTIVALSHLVMSCNASLYNKLIDHLLEGL 220
+RK+ A+S+L + + KLI ++ L
Sbjct: 1376 IRKQFANAMSYLAKFTSPNQMKKLIKTVVADL 1407
>AL132862-13|CAB60543.1| 385|Caenorhabditis elegans Hypothetical
protein Y73F8A.18 protein.
Length = 385
Score = 30.3 bits (65), Expect = 9.2
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 113 VISELPLGSNTLAANV--CKKITGKLSSAIEKQEDVSVQLEALDILADLLSRFGGLLISF 170
V+ ++ +GSN+ N+ + I G L + + +VS LE L +A L +++
Sbjct: 223 VLGDVEVGSNSSLENMKSIELIFGSLIISGTQLTNVSF-LENLKYVAQLAEAKSAIIVEN 281
Query: 171 HPMLLNSLLPQLASPRQAVRKRTIV 195
+P LLN P+L R + ++V
Sbjct: 282 NPNLLNISFPKLKRVRSDINSVSVV 306
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.135 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,782,658
Number of Sequences: 27539
Number of extensions: 951476
Number of successful extensions: 2487
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2431
Number of HSP's gapped (non-prelim): 46
length of query: 1273
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1183
effective length of database: 10,094,651
effective search space: 11941972133
effective search space used: 11941972133
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -