Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002648-TA|BGIBMGA002648-PA|IPR002110|Ankyrin
         (223 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.75 
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    23   3.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 70  LVHSRDSDGYTPLHRAAYSNHLDAIS 95
           +V  +  DG+ P+H    SN+L  IS
Sbjct: 918 VVQYKTQDGFGPIHYGVCSNYLREIS 943


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 191 HGIYAPLFEMVSPASSYVSS 210
           H IYAP F ++  AS+ + S
Sbjct: 6   HPIYAPFFGVMGAASAIIFS 25


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.128    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,645
Number of Sequences: 429
Number of extensions: 2215
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 223
length of database: 140,377
effective HSP length: 55
effective length of query: 168
effective length of database: 116,782
effective search space: 19619376
effective search space used: 19619376
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)