Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002648-TA|BGIBMGA002648-PA|IPR002110|Ankyrin
(223 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 46 4e-06
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 38 9e-04
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 38 0.001
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 37 0.002
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 37 0.003
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 36 0.004
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 31 0.14
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 30 0.24
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 30 0.24
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 27 1.7
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 2.2
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.2
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 26 3.9
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 26 5.1
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 8.9
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 8.9
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 46.0 bits (104), Expect = 4e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 56 KLDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 115
+L ++ L P L+ +D G TPLHRAA + + L+S A +++ G+TPL
Sbjct: 119 RLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPL 178
Query: 116 HSA 118
H A
Sbjct: 179 HFA 181
Score = 36.3 bits (80), Expect = 0.004
Identities = 35/129 (27%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 68 PGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSF-GAKVSSKSELGWTPLHSACNWNNYH- 125
P +++ D D TPLH A ++ I LL K K E GWTPL + N +
Sbjct: 27 PNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPLMISINNRSVPD 86
Query: 126 --IVXXXXXXXXXXXXXSEGVQTPLHLASHLSHCKSTXXXXXXREDLVEVARKPNNSGET 183
I + G QT LH A+ +L+ RK + G+T
Sbjct: 87 NVIEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELI---RKKDLQGQT 143
Query: 184 PEQLARGHG 192
P A G
Sbjct: 144 PLHRAAAVG 152
Score = 29.1 bits (62), Expect = 0.55
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 64 LVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 115
L+++ +++ DS G+TPLH A H D L+ GA K T L
Sbjct: 160 LISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKDSENHTAL 211
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 38.3 bits (85), Expect = 9e-04
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 72 HSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 115
++ D +GYTP+H A H D + +L+ G ++ + + G TPL
Sbjct: 31 NAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/70 (21%), Positives = 29/70 (41%)
Query: 85 AAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSACNWNNYHIVXXXXXXXXXXXXXSEGV 144
AA D + L G ++ E G+TP+H+A ++ + ++ +
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
Query: 145 QTPLHLASHL 154
+TPL + L
Sbjct: 71 ETPLFVCEKL 80
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 60 LRELLVAKPGLVHSRDSDGYTPL 82
L ++LV + G ++ RD DG TPL
Sbjct: 52 LLKILVERGGDINIRDQDGETPL 74
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 75 DSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL-HSACNWNNY 124
D DG+T LH A H++ I LLL A + + L TPL S NNY
Sbjct: 245 DDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPLMRSVIFTNNY 295
Score = 28.3 bits (60), Expect = 0.96
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 70 LVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVS 105
LV+ +DS+G T L AA + +D ++ LLS+ A S
Sbjct: 361 LVNLQDSNGDTSLLIAARNGAMDCVNSLLSYNANPS 396
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 55 NKLDTLRELLVAKPGLVHSRDSD-GYTPLHRAAYSNHLDAISLLLS 99
NK +R LL K V +D + GYT LHRA Y +L+A SLLLS
Sbjct: 63 NKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLLS 108
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 71 VHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 115
V+ RD+ GYTPLH A+ +H D LLS GAK G P+
Sbjct: 888 VNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPI 932
Score = 30.3 bits (65), Expect = 0.24
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 75 DSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSACNWNNYHI 126
+ G + LH A +A + L + G V+ + LG+TPLH A +++ I
Sbjct: 859 NESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDI 910
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 56 KLDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSS-KSELGWTP 114
+LDT++ L+ ++ V++ D G T LH AA + + LL GA V++ +L P
Sbjct: 12 ELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGGDLQAAP 71
Query: 115 LHSACNWNNYHIVXXXXXXXXXXXXXSEGVQTPLHLASH 153
+H A + V + LHLA H
Sbjct: 72 IHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVH 110
Score = 32.3 bits (70), Expect = 0.059
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 71 VHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLH 116
V RD +TPL A+Y + + LL +GA V + E TPLH
Sbjct: 127 VDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLH 172
Score = 26.2 bits (55), Expect = 3.9
Identities = 19/76 (25%), Positives = 26/76 (34%)
Query: 74 RDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSACNWNNYHIVXXXXXX 133
+D G+ LH A ++ + LL V + + TPL A N I
Sbjct: 97 KDKQGFNCLHLAVHAASPLLVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRW 156
Query: 134 XXXXXXXSEGVQTPLH 149
E TPLH
Sbjct: 157 GADVLATDEDKMTPLH 172
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 75 DSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 115
D DG+T LH AA +L+ + LL GA V + + L T L
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSL 274
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 30.3 bits (65), Expect = 0.24
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 58 DTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAK--VSSKSELGWTPL 115
+ L E++ P + RD +G + LH A+ + H+ + ++ + K +++++E G T +
Sbjct: 16 ELLDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAM 75
Query: 116 HSA 118
H A
Sbjct: 76 HWA 78
Score = 28.7 bits (61), Expect = 0.73
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 70 LVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 118
++++++ G T +H AA + H + LLL G K+ +P++ A
Sbjct: 63 VINAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHIKNIYEKSPIYEA 111
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 30.3 bits (65), Expect = 0.24
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 77 DGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 118
+ +TPL A+ + + +S+L++ GA V GWT + A
Sbjct: 400 NSWTPLMLASATGLSEIVSILVASGASVDEVDSSGWTAMEQA 441
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 74 RDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELG-WTPLHSACNWNNYHIV 127
RD TPL A NH++A+ LLS K ++ ++ G PL C +Y ++
Sbjct: 295 RDVMHDTPLTLAIKGNHVEALHALLSAQDKETTSTKPGPVPPLVLTCCVGDYDLI 349
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 63 LLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGW 112
LL A P H+ G + YS+ + + LLL S SEL W
Sbjct: 456 LLAADPRNYHALLGKGLVQIENEQYSDAVKTLGLLLDDHENDPSLSELSW 505
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 194 YAPLFEMVSPASSYVSSLAFTCNRYLQTN 222
+ PL E ++ AS YVSS A C + + TN
Sbjct: 593 FYPLLEHLAFASPYVSSFAEACIQAIATN 621
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 1 MSDEDDSDVEAKYFKEISDEIQTLKKNPETS 31
+++E +SD + +Y K++ + + KN ETS
Sbjct: 81 LNEEKESDTQTRYLKQLINICNSPSKNHETS 111
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 182 ETPEQLARGHGIYAPLFEMVSPASSYV 208
ETPEQ GH P FE P + V
Sbjct: 214 ETPEQFFLGHSFVPPNFESFHPKNYLV 240
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 57 LDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSN 89
L+ +R L + P +H RDS Y +YSN
Sbjct: 231 LNVMRALCTSHPRGIHWRDSRSYLLSQEISYSN 263
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 6 DSDVEAKYFKEISDEIQTLKKNPETSGMFVSGW 38
D+D K +++ I TLK NP + +S W
Sbjct: 452 DTDYTNKGVDQLAQVISTLKLNPYDRRIILSAW 484
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 4 EDDSDVEAKYFKEISDEIQTLKKNPET 30
ED+ D+ + ++ +QTL K P T
Sbjct: 688 EDEEDISYRTMDQLDPNLQTLSKLPRT 714
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 933,749
Number of Sequences: 5004
Number of extensions: 32301
Number of successful extensions: 73
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 28
length of query: 223
length of database: 2,362,478
effective HSP length: 70
effective length of query: 153
effective length of database: 2,012,198
effective search space: 307866294
effective search space used: 307866294
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -