GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002648-TA|BGIBMGA002648-PA|IPR002110|Ankyrin
         (223 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          38   2e-04
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    36   0.001
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   5.5  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 71  VHSRDSDGYTPLHRAAYSNHLDAIS-LLLSFGAKVSSKSELGWTPLHSACNWNNYHIVXX 129
           +H  D  G TPLHRA   N  D +  LLL  G ++   ++ G T L +A    N  I   
Sbjct: 810 LHYCDYRGNTPLHRAVVENVPDMVRLLLLQGGLRLDCTNDDGLTALQAAVYARNLKITRI 869

Query: 130 XXXXXXXXXXXS-EGVQTPLHLASHLSHCKSTXXXXXXREDLVEVARKPNNSGETPEQLA 188
                        +     LH+A  + +           E   E+ R+ NN+G TP QLA
Sbjct: 870 LLEAGASVREKDLKHGNNILHIA--VDNDALDIVHYILEEVKEELGRERNNAGYTPLQLA 927



 Score = 31.1 bits (67), Expect = 0.027
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 3/105 (2%)

Query: 55  NKLDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKS-ELGWT 113
           N  D +R LL+     +   + DG T L  A Y+ +L    +LL  GA V  K  + G  
Sbjct: 828 NVPDMVRLLLLQGGLRLDCTNDDGLTALQAAVYARNLKITRILLEAGASVREKDLKHGNN 887

Query: 114 PLHSACNWNNYHIV--XXXXXXXXXXXXXSEGVQTPLHLASHLSH 156
            LH A + +   IV               +    TPL LA   SH
Sbjct: 888 ILHIAVDNDALDIVHYILEEVKEELGRERNNAGYTPLQLADAKSH 932



 Score = 27.1 bits (57), Expect = 0.45
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 80  TPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 118
           T LH A   N    +  LL  GAK+      G TPLH A
Sbjct: 786 TGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRA 824


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 35.5 bits (78), Expect = 0.001
 Identities = 20/50 (40%), Positives = 27/50 (54%)

Query: 53  EHNKLDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGA 102
           EH  L+  R +L +    V+S +SDG TPL  A  SN+     +LL  GA
Sbjct: 436 EHGHLEKARTILESTDVDVNSLNSDGLTPLDVAVLSNNRSMTKMLLQQGA 485


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 167  REDLVEVARKPNNSGETPEQLARGHGIYA 195
            RED+ +  RK N+ GE+ E +  G  + A
Sbjct: 1010 REDVEDRCRKCNSGGESIEHVIAGCPVLA 1038


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.128    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,977
Number of Sequences: 2123
Number of extensions: 7001
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 5
length of query: 223
length of database: 516,269
effective HSP length: 62
effective length of query: 161
effective length of database: 384,643
effective search space: 61927523
effective search space used: 61927523
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)