GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002646-TA|BGIBMGA002646-PA|undefined
         (80 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   5.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   5.7  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    19   7.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   7.6  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    19   10.0 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   10.0 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   10.0 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   10.0 
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    19   10.0 

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 9   ELPSQDIGGSFNARALTTPDDEAAEAAVREY 39
           EL S++I G  +  A  TPD         EY
Sbjct: 254 ELQSENIPGFDDYMASLTPDTNRRNPWFSEY 284


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 9   ELPSQDIGGSFNARALTTPDDEAAEAAVREY 39
           EL S++I G  +  A  TPD         EY
Sbjct: 344 ELQSENIPGFDDYMASLTPDTNRRNPWFSEY 374


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 36

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)

Query: 1  MSTQYHIWELP 11
          MS+ YH+ +LP
Sbjct: 1  MSSPYHVAQLP 11


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)

Query: 48  PLTRGAFPPSLPDEPEDN 65
           P+T   F P++ +E  D+
Sbjct: 858 PMTNDDFNPNIEEEASDS 875


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
          protein.
          Length = 117

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 51 RGAFPPSLPDEPEDNWEVVDYVE 73
          RGA P   P+E     +V+ +++
Sbjct: 77 RGACPQCSPEETRQIKKVLSHIQ 99


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 55  PPSLPDEPEDNWEVVDYVE 73
           PP LP+    N + +D +E
Sbjct: 358 PPVLPENHLKNAKYLDVIE 376


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 55  PPSLPDEPEDNWEVVDYVE 73
           PP LP+    N + +D +E
Sbjct: 358 PPVLPENHLKNAKYLDVIE 376


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 55  PPSLPDEPEDNWEVVDYVE 73
           PP LP+    N + +D +E
Sbjct: 358 PPVLPENHLKNAKYLDVIE 376


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
          protein.
          Length = 117

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 51 RGAFPPSLPDEPEDNWEVVDYVE 73
          RGA P   P+E     +V+ +++
Sbjct: 77 RGACPQCSPEETRQIKKVLSHIQ 99


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.132    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,986
Number of Sequences: 429
Number of extensions: 987
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 80
length of database: 140,377
effective HSP length: 47
effective length of query: 33
effective length of database: 120,214
effective search space:  3967062
effective search space used:  3967062
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.1 bits)
S2: 36 (18.6 bits)