Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002645-TA|BGIBMGA002645-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site, IPR001590|Peptidase
M12B, ADAM/reprolysin
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0051 + 9324941-9325192,9326033-9326305 38 0.032
08_02_1104 + 24339463-24340314,24340472-24340786 35 0.22
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 34 0.39
01_06_0335 - 28532241-28532579 31 2.7
01_01_0117 + 864966-865686,866860-866883,867006-868063 31 2.7
01_01_0102 + 769442-770159,770710-770805,771340-771363,771470-77... 31 2.7
12_01_0169 - 1263679-1264349,1264437-1264641 31 3.6
08_02_0588 + 19036509-19039235 29 8.4
>11_03_0051 + 9324941-9325192,9326033-9326305
Length = 174
Score = 37.5 bits (83), Expect = 0.032
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 38 LLPREAQSSVDGSNDDVPLPYNFD---AFGRNFDLQLVPNRRLVSPEF-RVWTERGEEKP 93
L REA V ND + L + AF R+ D + RRL S +F RVW + +
Sbjct: 16 LASREAAVLVQVGNDIMLLRDRLEWLQAFVRDADRR----RRLASDDFTRVWVRQTRDVA 71
Query: 94 LSSVDASCHFLHASPNAVAAFSACK 118
+ DA HF H +P A+ + CK
Sbjct: 72 FDAEDALDHFFHKAPAAMQRTAGCK 96
>08_02_1104 + 24339463-24340314,24340472-24340786
Length = 388
Score = 34.7 bits (76), Expect = 0.22
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 382 YIMSPSRGTNGEASWSSCSARVVADLKWATCLLDGDDGEEDIPNELQHERFSGAP 436
Y++ +RG + SSCS V+ C+LDG G + N E S P
Sbjct: 75 YVVDEARGRHRRVWTSSCSVDVIGTRNGLICVLDGGTGAVTVANPATRESLSVPP 129
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 33.9 bits (74), Expect = 0.39
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 27 GADVQVVYLPALLPREAQSSVDGSNDDVPLPYNFDAFGRNFDLQLVPNR 75
G+ +V P +LP+ S++ G N + +P + D F + ++ +P+R
Sbjct: 116 GSSTAIVPAPHMLPKAPDSTIPGKNTTITIPGSSDRFSTSALMERIPSR 164
>01_06_0335 - 28532241-28532579
Length = 112
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 432 FSGAPGAIWSAKKQCEVLLRDADAAPWSGGGDQRGQCAQLACRTPHRAGFFYAGPALPGT 491
FS AI A +LL A A S ++ C L +P + F G P +
Sbjct: 8 FSTVVAAIAIAALLSSLLLLQATPAAASARASKKASC-DLMQLSPCVSAFSGVGQGSPSS 66
Query: 492 ACGNKMWCQGGEC 504
AC +K+ QG C
Sbjct: 67 ACCSKLKAQGSSC 79
>01_01_0117 + 864966-865686,866860-866883,867006-868063
Length = 600
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 53 DVPLPYNFDAFGRNFDLQLVPN--RRLVSPEFRVWT 86
D+P+PY++D G NFD+ + +R++S V+T
Sbjct: 189 DIPMPYSYDKNGPNFDISIFTETAKRVISTGETVFT 224
>01_01_0102 +
769442-770159,770710-770805,771340-771363,771470-772542
Length = 636
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 53 DVPLPYNFDAFGRNFDLQLVPN--RRLVSPEFRVWT 86
D+P+PY++D G NFD+ + +R++S V+T
Sbjct: 188 DIPMPYSYDKNGPNFDISIFTETAKRVISTGETVFT 223
>12_01_0169 - 1263679-1264349,1264437-1264641
Length = 291
Score = 30.7 bits (66), Expect = 3.6
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 231 GVQALYQHSSLGTHIQLSLVRLTLLRSQ---PTDLSAHAERGKLLDSFC--AYQRSLNVE 285
G A+++ ++G ++L+ L LLR + P D A A R + SF AY R L+
Sbjct: 102 GRGAIFRLGAVGQQLRLATETLQLLRLEAPTPQDADAAAARAVFILSFGTDAYARVLSRG 161
Query: 286 DDED---PEHWDMALLLSGLDFYSE------ENGRRNGVTMGLAPVGGVCLP 328
+ D P+H L D + E G R MG+AP+G C P
Sbjct: 162 SEADASAPKHGRRGLARLLADRVARAVEELYEAGARRTAVMGVAPLG--CAP 211
>08_02_0588 + 19036509-19039235
Length = 908
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 456 APWSGGGDQRGQCAQLACRTPHRAGFFYAGPALPGTACGNKMWCQGGE 503
A W GGGD R A L R P R AG G G++M +GGE
Sbjct: 59 AEWGGGGDARAGAAALPSRCPRRP-VAAAGGRGEG---GDRMRGRGGE 102
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,007,017
Number of Sequences: 37544
Number of extensions: 907274
Number of successful extensions: 1629
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1622
Number of HSP's gapped (non-prelim): 10
length of query: 622
length of database: 14,793,348
effective HSP length: 86
effective length of query: 536
effective length of database: 11,564,564
effective search space: 6198606304
effective search space used: 6198606304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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