GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002641-TA|BGIBMGA002641-PA|IPR007245|Gpi16 subunit, GPI
transamidase component
         (507 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071437-1|AAL49059.1|  633|Drosophila melanogaster RE52151p pro...   442   e-124
AE014298-1169|AAF46367.1|  633|Drosophila melanogaster CG11190-P...   442   e-124
BT016016-1|AAV36901.1| 1340|Drosophila melanogaster RE21729p pro...    31   3.7  
AF312579-1|AAG41425.1| 1406|Drosophila melanogaster roundabout 2...    31   3.7  
AE014134-252|AAF51375.2| 1463|Drosophila melanogaster CG5481-PA ...    31   3.7  

>AY071437-1|AAL49059.1|  633|Drosophila melanogaster RE52151p
           protein.
          Length = 633

 Score =  442 bits (1090), Expect = e-124
 Identities = 222/502 (44%), Positives = 324/502 (64%), Gaps = 28/502 (5%)

Query: 7   HTYLAPRSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAPGAELYAWFS-SDVEN- 64
           HT L PR + E+L +F V ELH  LT+G WR+  WGYP+++A  GAE++AWFS +++ N 
Sbjct: 61  HTQLTPRVIAELLQQFAVKELHIGLTQGLWRYETWGYPIVEATSGAEMWAWFSGANLTNR 120

Query: 65  -VDTQWKKLSSTLAGLFCASLNFIEDFNTITPQMALQPTGAIPQNPNITSQLRYASLPRE 123
            VD QWK+L++  +G+ CASLNF+++ N+I P+  ++P   +P N      +RYA+LPRE
Sbjct: 121 DVDRQWKELANVFSGVLCASLNFVDNTNSIAPRHLIRPQ-FMPANGQ--RFVRYATLPRE 177

Query: 124 IVCTENLTPWKKLLPCESSRGLSALLNSRMIHNTNYHSIGVHTRKXXXXXXXXXXXLEIK 183
           IVCTENLTPWKKLLPC S+ G ++LLNS  +HNT YHS+G+  R            +E+ 
Sbjct: 178 IVCTENLTPWKKLLPCGSASGFASLLNSGHVHNTKYHSLGLKVRVLCEDHDEDNCIVELT 237

Query: 184 QTVALVYDSKI--IRTTDWSFTKLFGQGLPGGCPLASSSKVYVDITTNDT-QPFLLSPEP 240
           QT  LVYD ++  +   D+S  +LFG GL G C LA SSK+YV    N+  + + L PEP
Sbjct: 238 QTANLVYDLRLFELSNNDFSLRRLFGMGLNGYCELAESSKIYVQ--RNELGERYQLVPEP 295

Query: 241 EKVLLSQRGGSETKLALYTIKPENK--------MTTIGAKYISKK-DLVLMKLPPLYFNR 291
              + + RGG     ++Y +  + K        +  +  K  +++ +L    LPP+  +R
Sbjct: 296 VHEVKTTRGGHSVVYSVYDMHEQFKEAGERLFNVAWLAPKSANRRRNLAKPSLPPVTVHR 355

Query: 292 YVLGYGKEFGGIVTELTNTFWSSIDVVVLQNAPWWLPIQLSSL-------RINGEASSEM 344
           Y+LG+G+E G IVTE+TN+ + ++ +++ +  PW++   L +L       R+N      +
Sbjct: 356 YLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWYVHAYLHTLSIRRKPQRVNEYGGQRL 415

Query: 345 VLAR-HYSPGRSRQKPYHLELLLRLPPKSATKITIDFEFVFLKWQEYPPDANHGFYVGSA 403
                HY+PG+ R+ P HLE+   LP +++  I+ID +++ LKW EYPPDANHG Y+GSA
Sbjct: 416 TFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISIDVDYLLLKWLEYPPDANHGHYIGSA 475

Query: 404 IITANLPTARNYTSLPGTASLFESSINASKPWYPAVFRTNGVMVSLPTPDFSMPYNVICL 463
           I+++ LP  RNYT+LP    LFE S NA++P Y     T  ++VSLPTPDFSMPYNVICL
Sbjct: 476 IVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVLSLHTEALIVSLPTPDFSMPYNVICL 535

Query: 464 ACTVVALAFGPLHNICTKELVL 485
           ACTVVALAFGP+H++ TK +++
Sbjct: 536 ACTVVALAFGPIHSVATKMIIV 557


>AE014298-1169|AAF46367.1|  633|Drosophila melanogaster CG11190-PA
           protein.
          Length = 633

 Score =  442 bits (1090), Expect = e-124
 Identities = 222/502 (44%), Positives = 324/502 (64%), Gaps = 28/502 (5%)

Query: 7   HTYLAPRSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAPGAELYAWFS-SDVEN- 64
           HT L PR + E+L +F V ELH  LT+G WR+  WGYP+++A  GAE++AWFS +++ N 
Sbjct: 61  HTQLTPRVIAELLQQFAVKELHIGLTQGLWRYETWGYPIVEATSGAEMWAWFSGANLTNR 120

Query: 65  -VDTQWKKLSSTLAGLFCASLNFIEDFNTITPQMALQPTGAIPQNPNITSQLRYASLPRE 123
            VD QWK+L++  +G+ CASLNF+++ N+I P+  ++P   +P N      +RYA+LPRE
Sbjct: 121 DVDRQWKELANVFSGVLCASLNFVDNTNSIAPRHLIRPQ-FMPANGQ--RFVRYATLPRE 177

Query: 124 IVCTENLTPWKKLLPCESSRGLSALLNSRMIHNTNYHSIGVHTRKXXXXXXXXXXXLEIK 183
           IVCTENLTPWKKLLPC S+ G ++LLNS  +HNT YHS+G+  R            +E+ 
Sbjct: 178 IVCTENLTPWKKLLPCGSASGFASLLNSGHVHNTKYHSLGLKVRVLCEDHDEDNCIVELT 237

Query: 184 QTVALVYDSKI--IRTTDWSFTKLFGQGLPGGCPLASSSKVYVDITTNDT-QPFLLSPEP 240
           QT  LVYD ++  +   D+S  +LFG GL G C LA SSK+YV    N+  + + L PEP
Sbjct: 238 QTANLVYDLRLFELSNNDFSLRRLFGMGLNGYCELAESSKIYVQ--RNELGERYQLVPEP 295

Query: 241 EKVLLSQRGGSETKLALYTIKPENK--------MTTIGAKYISKK-DLVLMKLPPLYFNR 291
              + + RGG     ++Y +  + K        +  +  K  +++ +L    LPP+  +R
Sbjct: 296 VHEVKTTRGGHSVVYSVYDMHEQFKEAGERLFNVAWLAPKSANRRRNLAKPSLPPVTVHR 355

Query: 292 YVLGYGKEFGGIVTELTNTFWSSIDVVVLQNAPWWLPIQLSSL-------RINGEASSEM 344
           Y+LG+G+E G IVTE+TN+ + ++ +++ +  PW++   L +L       R+N      +
Sbjct: 356 YLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWYVHAYLHTLSIRRKPQRVNEYGGQRL 415

Query: 345 VLAR-HYSPGRSRQKPYHLELLLRLPPKSATKITIDFEFVFLKWQEYPPDANHGFYVGSA 403
                HY+PG+ R+ P HLE+   LP +++  I+ID +++ LKW EYPPDANHG Y+GSA
Sbjct: 416 TFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISIDVDYLLLKWLEYPPDANHGHYIGSA 475

Query: 404 IITANLPTARNYTSLPGTASLFESSINASKPWYPAVFRTNGVMVSLPTPDFSMPYNVICL 463
           I+++ LP  RNYT+LP    LFE S NA++P Y     T  ++VSLPTPDFSMPYNVICL
Sbjct: 476 IVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVLSLHTEALIVSLPTPDFSMPYNVICL 535

Query: 464 ACTVVALAFGPLHNICTKELVL 485
           ACTVVALAFGP+H++ TK +++
Sbjct: 536 ACTVVALAFGPIHSVATKMIIV 557


>BT016016-1|AAV36901.1| 1340|Drosophila melanogaster RE21729p
           protein.
          Length = 1340

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 370 PKSATKITIDFEFVFLKWQEYPPDANHGFYVGSAIITANLPTARNYTSLPGTASLFESSI 429
           P     + ++   VFLKW+       HG  +   +I   + TA N++ +     L   +I
Sbjct: 742 PYGMEALLLNSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRI-----LTNVTI 796

Query: 430 NASKPWYPAVFRTNGVMVSL 449
           +A+ P       T GVM ++
Sbjct: 797 DAASPTLVLANLTEGVMYTV 816


>AF312579-1|AAG41425.1| 1406|Drosophila melanogaster roundabout 2
           protein.
          Length = 1406

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 370 PKSATKITIDFEFVFLKWQEYPPDANHGFYVGSAIITANLPTARNYTSLPGTASLFESSI 429
           P     + ++   VFLKW+       HG  +   +I   + TA N++ +     L   +I
Sbjct: 808 PYGMEALLLNSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRI-----LTNVTI 862

Query: 430 NASKPWYPAVFRTNGVMVSL 449
           +A+ P       T GVM ++
Sbjct: 863 DAASPTLVLANLTEGVMYTV 882


>AE014134-252|AAF51375.2| 1463|Drosophila melanogaster CG5481-PA
           protein.
          Length = 1463

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 370 PKSATKITIDFEFVFLKWQEYPPDANHGFYVGSAIITANLPTARNYTSLPGTASLFESSI 429
           P     + ++   VFLKW+       HG  +   +I   + TA N++ +     L   +I
Sbjct: 865 PYGMEALLLNSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRI-----LTNVTI 919

Query: 430 NASKPWYPAVFRTNGVMVSL 449
           +A+ P       T GVM ++
Sbjct: 920 DAASPTLVLANLTEGVMYTV 939


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.134    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,322,884
Number of Sequences: 52641
Number of extensions: 1024946
Number of successful extensions: 2051
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2039
Number of HSP's gapped (non-prelim): 5
length of query: 507
length of database: 24,830,863
effective HSP length: 88
effective length of query: 419
effective length of database: 20,198,455
effective search space: 8463152645
effective search space used: 8463152645
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)