Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002641-TA|BGIBMGA002641-PA|IPR007245|Gpi16 subunit, GPI
transamidase component
(507 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 146 2e-35
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 128 1e-29
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 33 0.48
AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical ... 30 4.4
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 29 5.9
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 29 7.7
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 29 7.7
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 146 bits (355), Expect = 2e-35
Identities = 127/467 (27%), Positives = 215/467 (46%), Gaps = 61/467 (13%)
Query: 12 PRSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAP-GAELYAWFSSD-VENVDTQW 69
PR + E+L+R+ V +L T+ G+W WG P ++P GA+++A F +D E+ D +
Sbjct: 62 PRIIQELLSRYSVRKLTVTMAHGRWNLIGWGLPPQPSSPTGAQVFAEFEADQQEDADERM 121
Query: 70 KKLSSTLAGLFCASLNFIEDFNTIT-PQMALQPTGAIPQNPNITSQLRYASLPREIVCTE 128
K L L G+ C S++ I N IT P+ + + RY L E CTE
Sbjct: 122 KFLVEALNGVLCTSISHI---NVITSPEFIVLKN----HGGETSVHKRYGVLSGETTCTE 174
Query: 129 NLTPWKKLLPCESSRGLSALLNSRMIHNTNYHSIGVHTRKXXXXXXXXXXXLEIKQTVAL 188
NLT +KLL C+ + G+S LL+ ++N+ YHS + + +E+ +V +
Sbjct: 175 NLTRLRKLLACKEN-GISTLLHPSKLYNSVYHSSHLVVEQ-QCDKDQCNSKMEVGVSVVM 232
Query: 189 VYDSKIIRTTDWSFTKLFGQGLPGGCPLASSSKVYVDITTNDTQPFLLSPEPEKVLLSQR 248
S+ + WS +F + L C +A SSK++V TT + ++ K L +
Sbjct: 233 RNPSQKTQ-RHWSLADVFERKLGSQCKVARSSKIHVIGTTGE-----ITTTDVKNLTTIN 286
Query: 249 GGSETKLALYTIKPENKMTTIGAKYISKKDLVLMKLPPLYFNRYVLGYGKEFGGIVTELT 308
G E LY + M K S + G+ ++ G + +T
Sbjct: 287 G--EEPFELYIPITDISMKQSVVKAWSSQG----------------GFEQKHGVLTVHIT 328
Query: 309 NTFWSSIDVVVLQNAPWWLPIQLSSLRINGEASSEMVLARHYSPGRSRQKPYHLELLLRL 368
N S+ ++ V Q P+++ ++ S + + + + + + +S + P L+ ++L
Sbjct: 329 ND-ESASEIHVSQIIPYYVHLRYSKINWKCDKNGVPRIEKIFKNSKSLEAPTLLQYKMKL 387
Query: 369 PPKSATKITIDFEFVFLKWQEYPPDANHGFYVGSAIITANLPTARNYTSLPGTASLFESS 428
++TI F+ L+ ++YPPDANHG ++ +A + T+ YT
Sbjct: 388 SAGQTCELTIPFDKQLLRLEQYPPDANHGMHIPAASVYIQKSTS-TYT------------ 434
Query: 429 INASKPWYPAVFRTNGVMVSLPTPDFSMPYNVICLACTVVALAFGPL 475
+N ++V LP PDFSMP+NVIC T AL FGP+
Sbjct: 435 -----------IHSNAILVLLPVPDFSMPFNVICFVATAFALVFGPI 470
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 128 bits (308), Expect = 1e-29
Identities = 122/466 (26%), Positives = 209/466 (44%), Gaps = 75/466 (16%)
Query: 12 PRSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAP-GAELYAWFSSDV-ENVDTQW 69
PR + E+L+R+ V +L T+ G+W WG P ++P GA+++A F +D E+ D +
Sbjct: 62 PRIIQELLSRYSVRKLTVTMAHGRWNLIGWGLPPQPSSPTGAQVFAEFEADQQEDADERM 121
Query: 70 KKLSSTLAGLFCASLNFIEDFNTITPQMALQPTGAIPQNPNITSQLRYASLPREIVCTEN 129
K L L G+ F+++ T + RY L E CTEN
Sbjct: 122 KFLVEALNGVL-----FLKNHGGET-----------------SVHKRYGVLSGETTCTEN 159
Query: 130 LTPWKKLLPCESSRGLSALLNSRMIHNTNYHSIGVHTRKXXXXXXXXXXXLEIKQTVALV 189
LT +KLL C+ + G+S LL+ ++N+ YHS + + +E+ +V +
Sbjct: 160 LTRLRKLLACKEN-GISTLLHPSKLYNSVYHSSHLVVEQ-QCDKDQCNSKMEVGVSVVMR 217
Query: 190 YDSKIIRTTDWSFTKLFGQGLPGGCPLASSSKVYVDITTNDTQPFLLSPEPEKVLLSQRG 249
S+ + WS +F + L C +A SSK++V TT + ++ K L + G
Sbjct: 218 NPSQKTQ-RHWSLADVFERKLGSQCKVARSSKIHVIGTTGE-----ITTTDVKNLTTING 271
Query: 250 GSETKLALYTIKPENKMTTIGAKYISKKDLVLMKLPPLYFNRYVLGYGKEFGGIVTELTN 309
E LY + M K S + G+ ++ G + +TN
Sbjct: 272 --EEPFELYIPITDISMKQSVVKAWSSQG----------------GFEQKHGVLTVHITN 313
Query: 310 TFWSSIDVVVLQNAPWWLPIQLSSLRINGEASSEMVLARHYSPGRSRQKPYHLELLLRLP 369
S+ ++ V Q P+++ ++ S + + + + + + +S + P L+ ++L
Sbjct: 314 D-ESASEIHVSQIIPYYVHLRYSKINWKCDKNGVPRIEKIFKNSKSLEAPTLLQYKMKLS 372
Query: 370 PKSATKITIDFEFVFLKWQEYPPDANHGFYVGSAIITANLPTARNYTSLPGTASLFESSI 429
++TI F+ L+ ++YPPDANHG ++ +A + T+ YT
Sbjct: 373 AGQTCELTIPFDKQLLRLEQYPPDANHGMHIPAASVYIQKSTS-TYT------------- 418
Query: 430 NASKPWYPAVFRTNGVMVSLPTPDFSMPYNVICLACTVVALAFGPL 475
+N ++V LP PDFSMP+NVIC T AL FGP+
Sbjct: 419 ----------IHSNAILVLLPVPDFSMPFNVICFVATAFALVFGPI 454
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 33.1 bits (72), Expect = 0.48
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 239 EPEKVLLSQRGGSETKLALYTIKPENKMTTIGAKYI----SKKDLVLMKLPPLYFNRYVL 294
E E V + ET+ L T P +K+TT+ +K I ++++ ++ K +YF R +
Sbjct: 423 ETENVQIILHEMLETQKILETKNPMSKITTMTSKLIEVSQNRENKLIAKRELIYFERQIR 482
Query: 295 GYGKE 299
GY KE
Sbjct: 483 GYTKE 487
>AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical
protein Y105E8A.8 protein.
Length = 449
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 225 DITTNDTQ-PFLLSPEPEKVLLSQRGGSETKLALYTIKPENKMTTI 269
D T T P ++P P L GGS + +A+Y++K N ++TI
Sbjct: 257 DYNTGTTGLPMSITPHPTMPDLFAAGGSSSLVAIYSLKWRNAVSTI 302
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 230 DTQPFLLSPEPEKVLLSQRGGSETKLALYTIKPENKMTTIGAKYI----SKKDLVLMKLP 285
+T P + E EKV + + L P NK+T + +K I ++++ ++ K
Sbjct: 696 ETIPQRSTEETEKVQAILFEMLKAQAVLEVESPMNKITKMTSKLIETSLNRENKIIAKRE 755
Query: 286 PLYFNRYVLGYGKE 299
+YF R + GY KE
Sbjct: 756 FIYFERQIRGYTKE 769
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform e protein.
Length = 2702
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 31 LTEGQWRHNHWGYPVLDAAPGAELYAWFSSDVENVDTQWKKLSSTLAG 78
++E Q H HW V+D G L W SS+ E K+++ LAG
Sbjct: 187 ISENQGVHTHWD--VIDNN-GDALICWKSSETEQKSLDAKQVTEELAG 231
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 31 LTEGQWRHNHWGYPVLDAAPGAELYAWFSSDVENVDTQWKKLSSTLAG 78
++E Q H HW V+D G L W SS+ E K+++ LAG
Sbjct: 5033 ISENQGVHTHWD--VIDNN-GDALICWKSSETEQKSLDAKQVTEELAG 5077
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,253,183
Number of Sequences: 27539
Number of extensions: 513282
Number of successful extensions: 1125
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1111
Number of HSP's gapped (non-prelim): 12
length of query: 507
length of database: 12,573,161
effective HSP length: 84
effective length of query: 423
effective length of database: 10,259,885
effective search space: 4339931355
effective search space used: 4339931355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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