GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002639-TA|BGIBMGA002639-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site,
IPR013026|Tetratricopeptide region, IPR007803|Aspartyl/Asparaginyl
beta-hydroxylase
         (1030 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    25   2.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   4.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   8.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   8.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   8.1  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 117 DDNGDDRE--DQSNELEEEFDESNHSAEDDQ 145
           D NGD  +  DQ+  LE   +E++ + +DD+
Sbjct: 86  DTNGDTSQVDDQNESLEASVNENSKNGDDDE 116


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 472 GTQKSTPIKSQLNVDEEVEDTP 493
           G +KS  I  +  V EE+ED P
Sbjct: 204 GPEKSASIPKKKEVKEEIEDEP 225


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 51  WCAKIIFFSLLAVL----VTLIGLIILENRGLTELEANSVESRYSGVLDGWI 98
           W +  + ++++ +L    VT++ L  +  +GL  +EAN +    SG+  G++
Sbjct: 67  WASARVGYTIVTILGATFVTVLQLHKIFAKGLNVIEANRLFFYCSGLASGYL 118


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 51  WCAKIIFFSLLAVL----VTLIGLIILENRGLTELEANSVESRYSGVLDGWI 98
           W +  + ++++ +L    VT++ L  +  +GL  +EAN +    SG+  G++
Sbjct: 67  WASARVGYTIVTILGATFVTVLQLHKIFAKGLNVIEANRLFFYCSGLASGYL 118


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 51  WCAKIIFFSLLAVL----VTLIGLIILENRGLTELEANSVESRYSGVLDGWI 98
           W +  + ++++ +L    VT++ L  +  +GL  +EAN +    SG+  G++
Sbjct: 67  WASARVGYTIVTILGATFVTVLQLHKIFAKGLNVIEANRLFFYCSGLASGYL 118


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.131    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,373
Number of Sequences: 317
Number of extensions: 7342
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 5
length of query: 1030
length of database: 114,650
effective HSP length: 64
effective length of query: 966
effective length of database: 94,362
effective search space: 91153692
effective search space used: 91153692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)