Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002639-TA|BGIBMGA002639-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site,
IPR013026|Tetratricopeptide region, IPR007803|Aspartyl/Asparaginyl
beta-hydroxylase
(1030 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 36 0.029
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 36 0.038
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 35 0.067
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 35 0.067
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 34 0.12
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 31 0.62
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 31 0.82
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 31 0.82
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 31 1.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 31 1.1
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 1.1
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 30 1.4
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 29 2.5
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 29 4.4
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 29 4.4
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 5.8
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 7.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 7.7
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 28 7.7
SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces pom... 28 7.7
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 102 PDDHHDEQTLDLKHHDDNGDDREDQSNELEEEFDESNHSAEDDQKED 148
PD +E+ D H+ G++ +D++ E EE+ +E++ S ED+ D
Sbjct: 350 PDYEENEKKYDAIKHEILGEEDDDENEEDEEDSEETSESEEDESVND 396
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 35.5 bits (78), Expect = 0.038
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 117 DDNGDDREDQSNELEEEFDESNHSAEDDQKED 148
D + ++ E++++E+EEEFDE E++++ED
Sbjct: 173 DADEEEEEEEADEMEEEFDEEGEGDEEEEEED 204
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 34.7 bits (76), Expect = 0.067
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 52 CAKIIFFSLLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDHHDEQTL 111
C ++ + V + + + ++++ L +E+ DG IE+ + HD
Sbjct: 87 CGTMVDLNNYLVSMEDVSIYVIDSHRPHNLNNIYIENNIFVFDDGDIEEDMNKIHDAWYA 146
Query: 112 DLKHHDDNGDDREDQSNELEEEFDESNHSAEDDQKED 148
H+ + ++ D SNE EEE ++ N S E D
Sbjct: 147 -FNSHELSDEENSDSSNEREEEVEDDNRSVESYSSSD 182
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 34.7 bits (76), Expect = 0.067
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 80 ELEANSVESRYSGVLDGWIEDAPDDHHDE----QTLDLKHHDDNGDDREDQ--SNELEEE 133
E +++ V+S D I D + +E D K +DN ++ E++ +NE EEE
Sbjct: 56 EKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEE 115
Query: 134 FDESNHSAEDDQKEDG 149
+E + E+D+ E G
Sbjct: 116 DEEDDEEDEEDEDESG 131
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 99 EDAPDDHHDEQTLDLKHHDDNGDDREDQSNE---LEEEFDESNHSAEDDQKEDG 149
ED DD DE+ D R D+ N+ +E E DE ED++ E G
Sbjct: 115 EDEEDDEEDEEDEDESGGGRRKRARHDRRNQFLDIEAEVDEDEEELEDEEDEIG 168
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 743 NRADLAETVLKETLKRWPNDHVALAHLGFILKISYNRLEEAVDAFKKALEDQTGPANEP- 801
NR DLA V+K L+ P D + LG I N + V+A++ + + + PA
Sbjct: 473 NRQDLAVQVIKRELENDPYDFLLRTLLGDI----ENNPKHYVEAWELSCK-RFAPAQRSL 527
Query: 802 -RFYYHYGDALLLLGRFNEAHEVH 824
++YY GD L + FNE+ +++
Sbjct: 528 GKYYYKKGDLLQAMNCFNESLKIN 551
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 447 EVPVEVPTDYSLPPVVEREVDEKNVGTQKSTPIKSQLNVDEEVEDTPAPEVIETQD 502
E E+ + + LPP + +++ E++VGT S K L V ++ ED E+++ D
Sbjct: 16 EAAQELTSIFELPPDLLKDITEEDVGTDDSCN-KKFLEVQKQKEDEEDEEILKGVD 70
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 31.1 bits (67), Expect = 0.82
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 74 ENRGLTELEANSVESRYSGVLDGW-IEDAPDDHHDEQTLDLKHHDDN----GDDREDQSN 128
EN E+ +V S V G IE P H E ++K ++N + E +
Sbjct: 265 ENNSAAEVIDETVNDLESAVSKGLQIETQPASHDGEVDGEVKEEEENKVSSSSNIEASQS 324
Query: 129 ELEEEFDESNHSAEDDQKED 148
LE + DE+N +DD ++D
Sbjct: 325 SLEVK-DEANRKVDDDDEDD 343
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 241 DNNRSIEQNDEDKSFEQNDDVSKQDDQSGQTDE 273
D++ E DE S E ND+ S+ DD+ TDE
Sbjct: 336 DSSAGSEGVDEGTSTEANDESSEDDDEDNNTDE 368
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 98 IEDAPDDHHDEQTLDLKHHDDNGDDREDQSNELEEEFDESNHSAEDDQKED 148
+E DD +E+ DL+ D G D+ +++E EEE + S +++D+ ED
Sbjct: 211 LEFVSDDEDEEEISDLE--DWLGSDQSMETSESEEE-ESSESESDEDEDED 258
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 118 DNGDDREDQSNELEEEFDESNHSAEDDQKED 148
DN DD+ D ++ EE D N E+ K+D
Sbjct: 1491 DNEDDKTDMDDQTEETLDADNTMEEEPSKDD 1521
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 106 HDEQTLDLKHHDDNGDDREDQSNEL--EEEFDESNHSAEDDQKED 148
HD+QT++ ++ DD D+ +++ E ++E + + +DD ED
Sbjct: 155 HDKQTINSEYADDVSDNTDEERTESKGQQESNSAEEYDDDDSDED 199
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 74 ENRGLTELEANSVESRYSGVLDGWIE--DAPDDHHDEQTLDLKHHDDNGDDREDQSNELE 131
E R + A+ ++ VL ++ D DD EQT + +DD+ DD D NE
Sbjct: 201 EWRNIVGRVADKLQLEQKSVLPNAVKNIDGQDDDSSEQTAAFEEYDDDDDDDVD-DNEQS 259
Query: 132 EEFDESNHSAE 142
E++ +A+
Sbjct: 260 NSMIETSANAD 270
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 PDDHHDEQT----LDLKHHDDNGDDREDQSNELEEEFDESNHSAED-DQKEDGTH 151
P + HD T L K H + + + +E+EEE D+ + ED D+ ED +
Sbjct: 171 PSEPHDVDTSKNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDDEDEDEDEDEDNNN 225
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 85 SVESRYSGVLDGWIEDAPDDHHDEQTLDLKHHDDNGD------DREDQSNELEEEFDESN 138
S +S D + D +D D+ + ++ DD +R++ +E EEE D+ N
Sbjct: 202 STDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDEDVDEEEEEDDDEN 261
Query: 139 HSAEDDQKED 148
+ DD+ E+
Sbjct: 262 NDEGDDEDEN 271
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 74 ENRGLTEL-EANSVESRYSGV------LDGWIEDAPDDHHDEQTLDLKHHDDNGDDREDQ 126
+ GLT+ +NS E+ YS D + DDH + T D D N ++ +D
Sbjct: 176 DKSGLTKFGNSNSYETTYSDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDD 235
Query: 127 SNELEEEFDESNHSAEDDQKED 148
+ E E + +++++ED
Sbjct: 236 ESSSGSESYERDEDVDEEEEED 257
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 117 DDNGDDREDQSNELEEEFDESNHSAEDDQKEDGT 150
DDNG D + E+D+S++S EDD+ E G+
Sbjct: 64 DDNGAGYVDNGYD---EWDQSHYSDEDDENEKGS 94
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 709 GTYLSAEPVYKLLIRRFPDNPNYRNNLTVSLLMANRADLAETVLKETLKRWPNDHVALAH 768
GT+ SA Y+++I++ P+N + L S+L + + L + +++ + +
Sbjct: 1461 GTWDSALSCYEIIIQKDPENKKAKIGLLNSMLQSGHYESLVLSLDSFIINDNHEYSKMLN 1520
Query: 769 LGFILKISYNRLEEAVDAFKKAL 791
LG ++ S+ L ++D+ KK L
Sbjct: 1521 LG--IEASWRSL--SIDSLKKCL 1539
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 99 EDAPDDHHDEQTLDLKHHDDNGDDREDQSNELEEEFDESNHS 140
E+ + D + D + + ++ +E EEE DES S
Sbjct: 91 EEETESEEDSEVSDESESESESESESEEESESEEESDESERS 132
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 73 LENRGLTELEANSVESRYSGVLDGWIEDAPDDHHDEQTLDLKHHDDNGDDREDQSNELEE 132
LE+ + + N E+ D ++D D + TLD D+ D + ++ E
Sbjct: 4105 LEDMDMEAADENKEEA--DAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEKMNE 4162
Query: 133 EFDESNHSAEDDQKEDG 149
+ E N ++ EDG
Sbjct: 4163 DGFEENVQENEESTEDG 4179
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 99 EDAPDDHHDEQT-LDLKHHDDNGDDREDQSNELEEEFDESNHSAEDDQKE 147
+ + DDH +EQ +DL + DD D+ N L + D+ + +++ E
Sbjct: 256 DSSVDDHDNEQDDVDLIGWECFFDDSSDELNTLSHQADDEGDTTDEETPE 305
>SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 98 IEDAPDDHHDEQTLDLKHHDDNGDDREDQSNELEEE 133
+EDA D D + D + DD G + ED S E E
Sbjct: 186 LEDARSDLEDYKEGDDSNWDDFGSESEDDSKEAHSE 221
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.131 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,916,668
Number of Sequences: 5004
Number of extensions: 151313
Number of successful extensions: 555
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 497
Number of HSP's gapped (non-prelim): 57
length of query: 1030
length of database: 2,362,478
effective HSP length: 80
effective length of query: 950
effective length of database: 1,962,158
effective search space: 1864050100
effective search space used: 1864050100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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