GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002639-TA|BGIBMGA002639-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site,
IPR013026|Tetratricopeptide region, IPR007803|Aspartyl/Asparaginyl
beta-hydroxylase
         (1030 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    29   0.83 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         28   1.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   2.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   2.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   7.7  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 0.83
 Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 99  EDAPDDHH--DEQTLDLKHHDDNGDDREDQSNELEEEFDESNHSAED 143
           + +PD+ H  +EQ  + +  ++  D+ E + +E  +E +E+   AE+
Sbjct: 72  DGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEE 118



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 5/52 (9%)

Query: 99  EDAPDDHHDEQTLDLKHHDDNGDDREDQSNELEEEFDE--SNHSAEDDQKED 148
           EDAP+   ++ + D +H ++   ++E+++   EEE DE  S  S E D+ E+
Sbjct: 63  EDAPEPVPEDGSPDEEHLEE---EQEEEAEADEEEADESESEESEESDELEE 111


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 107  DEQTLDLKHHDDNGDDREDQSNELEEEFDESNHSAEDD 144
            D    DL+H D NG    +  NE ++E DE +   +DD
Sbjct: 1806 DVDRFDLQHADSNGG---EDGNEDDDEDDEDDDDDDDD 1840



 Score = 27.1 bits (57), Expect = 2.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)

Query: 241  DNNRSIEQNDEDKSFEQNDDVSKQDDQSGQTDEYE 275
            D+N   + N++D   +++DD    D  +G+ +E+E
Sbjct: 1816 DSNGGEDGNEDDDEDDEDDDDDDDDTTTGEGNEHE 1850


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 114 KHHDDNGDDREDQSNELEEEFDESNHSAEDDQKEDGT 150
           K  D   DD E++  E EEE DE     E+  + + +
Sbjct: 959 KEVDAAEDDEEEEEEEQEEEEDEDEEGGEEHGQREAS 995


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 595  KQTKDGGDSLDDDWPGEPSESYWRQQLDQAEQDLRQGEWSAALGRVSAPS 644
            K+  DG D  DDD   +  E   +  +D   ++     W A   R SAPS
Sbjct: 1730 KEDDDGDDGEDDDVENDDPELSSQLMVDSMNENASNCSWEAVDDR-SAPS 1778


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 707 FRGTYLSAEPVYKLLIRRFPDN---PNYRNNLTVSLLMANRADLAETVLKETLKRWPNDH 763
           +RG   +A   ++ +++  P N        +L  +    ++ D+A+  LK+  +++P+D 
Sbjct: 352 YRGDSENAAQCFEKVLKAQPGNYETMKILGSLYATSSSQSKRDIAKNHLKKVTEQFPDDV 411

Query: 764 VALAHLGFILKISYNRLEEAVDAFKKALEDQTGPAN 799
            A   L  IL+   N L+ ++ A+  A    T   N
Sbjct: 412 EAWIELAQILE--QNDLQGSLQAYGTATSILTEKVN 445


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.131    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,074
Number of Sequences: 2123
Number of extensions: 33947
Number of successful extensions: 104
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 87
Number of HSP's gapped (non-prelim): 16
length of query: 1030
length of database: 516,269
effective HSP length: 71
effective length of query: 959
effective length of database: 365,536
effective search space: 350549024
effective search space used: 350549024
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)