GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002639-TA|BGIBMGA002639-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site,
IPR013026|Tetratricopeptide region, IPR007803|Aspartyl/Asparaginyl
beta-hydroxylase
         (1030 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    29   0.19 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               27   0.78 
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    25   3.2  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    25   3.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    24   7.3  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 0.19
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 462 VEREVDEKNVGTQKST-PIKSQLNVDEEVEDTPAPEVIETQDE 503
           +ER  DEKN G  K T   K + N +E++ D P  E  ET DE
Sbjct: 139 LERLFDEKNAGNNKITMKSKKEQNAEEDIVD-PVEE-NETYDE 179


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 117 DDNGDDREDQSNELEEEFDESNHSAEDDQKEDGTH 151
           DD  DD  D  N ++ + +  N S+ DD++ +  H
Sbjct: 86  DDKDDDESDNEN-IKSQKEFPNSSSSDDERPNSIH 119


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 668 DNRLLSQAIAAYIDLLKMNERLSDKKLIEVTDRTLERIKF-RGTYLSAEPVYKLL 721
           D   +S+ IA  I   K    +S    ++     ++RI+  +GT L  EPVYK++
Sbjct: 42  DELHISEDIATNIQAAKNGADMSQLGCLKAC--VMKRIEMLKGTELYVEPVYKMI 94


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 668 DNRLLSQAIAAYIDLLKMNERLSDKKLIEVTDRTLERIKF-RGTYLSAEPVYKLL 721
           D   +S+ IA  I   K    +S    ++     ++RI+  +GT L  EPVYK++
Sbjct: 42  DELHISEDIATNIQAAKNGADMSQLGCLKAC--VMKRIEMLKGTELYVEPVYKMI 94


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 6/28 (21%), Positives = 17/28 (60%)

Query: 78  LTELEANSVESRYSGVLDGWIEDAPDDH 105
           +T+  ++S   ++  ++D WI+  P ++
Sbjct: 324 ITDANSSSTPEQFKVIIDNWIKGTPQNN 351


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.131    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,348
Number of Sequences: 429
Number of extensions: 9054
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 5
length of query: 1030
length of database: 140,377
effective HSP length: 65
effective length of query: 965
effective length of database: 112,492
effective search space: 108554780
effective search space used: 108554780
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)