GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002638-TA|BGIBMGA002638-PA|IPR006153|Sodium/hydrogen
exchanger
         (291 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.87 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 89   QGSNEESEALPYRDVRSPPDIGLGLRNLDGSQS 121
            QGS+  SE +P +    PP  G       GS+S
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGPGSTGSKS 1127


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 216 QGDNTLRRTDSDSDLCIDDPQIPSSIDPQQSMRGE 250
           QG NT+ R  S S + I   +   ++D  +   GE
Sbjct: 536 QGQNTITRASSQSSVTIPFERTFRNLDLNRPQGGE 570


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,879
Number of Sequences: 317
Number of extensions: 2396
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 291
length of database: 114,650
effective HSP length: 56
effective length of query: 235
effective length of database: 96,898
effective search space: 22771030
effective search space used: 22771030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)