Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002638-TA|BGIBMGA002638-PA|IPR006153|Sodium/hydrogen
exchanger
(291 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69646-4|CAD36489.1| 611|Caenorhabditis elegans Hypothetical pr... 108 5e-24
Z69646-3|CAA93476.2| 630|Caenorhabditis elegans Hypothetical pr... 108 5e-24
AF497829-1|AAM18107.1| 611|Caenorhabditis elegans putative Na-H... 108 5e-24
AF497828-1|AAM18106.1| 630|Caenorhabditis elegans putative Na-H... 108 5e-24
AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical... 60 1e-09
AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical... 60 1e-09
AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H... 60 1e-09
AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H... 60 1e-09
AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H... 46 3e-05
AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchang... 46 3e-05
AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchang... 46 3e-05
Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H... 46 4e-05
Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H... 42 5e-04
AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H... 42 5e-04
M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiport... 41 9e-04
U28737-5|AAA68274.1| 684|Caenorhabditis elegans Na/h exchanger ... 41 0.001
U28737-4|AAM48522.1| 749|Caenorhabditis elegans Na/h exchanger ... 41 0.001
AF497827-1|AAM18105.1| 684|Caenorhabditis elegans putative Na-H... 41 0.001
AF497826-1|AAM18104.1| 749|Caenorhabditis elegans putative Na-H... 41 0.001
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 35 0.078
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 35 0.078
U21317-1|AAA62524.2| 627|Caenorhabditis elegans Na/h exchanger ... 32 0.42
AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H... 32 0.42
AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H... 31 0.96
AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchange... 31 0.96
AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchange... 31 0.96
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 29 2.9
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 29 2.9
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 29 2.9
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 29 2.9
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 29 2.9
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 28 8.9
>Z69646-4|CAD36489.1| 611|Caenorhabditis elegans Hypothetical
protein F57C7.2b protein.
Length = 611
Score = 108 bits (259), Expect = 5e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAMLTTTSM 63
RA+ +YPLS+LLN+ R+P IP +QHM+ F+GLRGAM+FALA RNT +E RQ + TT+
Sbjct: 428 RALFVYPLSWLLNIRRRPKIPKRYQHMILFAGLRGAMAFALAGRNTSTENRQMIFATTTA 487
Query: 64 IVIATVVLQGGAATHALDYLRIPTGQGSNEESEALPYRDVRSPPD 108
+VI TV++ GG + +DYL+I G+ + EE + L SP D
Sbjct: 488 VVIVTVLVNGGLTSWMIDYLQIKHGKDAIEEGQRLENSMSSSPAD 532
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 167 KARLARVWGALDSRLLKPLLTHARPPLTETLPAFMRPVARLLTTTHQ 213
KA L R W D+ +KPLLTHA P L +TLP F P+ LLT++ Q
Sbjct: 554 KAFLPRKWYHFDASFMKPLLTHATPSLEQTLPPFCLPLTSLLTSSRQ 600
>Z69646-3|CAA93476.2| 630|Caenorhabditis elegans Hypothetical
protein F57C7.2a protein.
Length = 630
Score = 108 bits (259), Expect = 5e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAMLTTTSM 63
RA+ +YPLS+LLN+ R+P IP +QHM+ F+GLRGAM+FALA RNT +E RQ + TT+
Sbjct: 428 RALFVYPLSWLLNIRRRPKIPKRYQHMILFAGLRGAMAFALAGRNTSTENRQMIFATTTA 487
Query: 64 IVIATVVLQGGAATHALDYLRIPTGQGSNEESEALPYRDVRSPPD 108
+VI TV++ GG + +DYL+I G+ + EE + L SP D
Sbjct: 488 VVIVTVLVNGGLTSWMIDYLQIKHGKDAIEEGQRLENSMSSSPAD 532
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 167 KARLARVWGALDSRLLKPLLTHARPPLTETLPAFMRPVARLLTTTHQ 213
KA L R W D+ +KPLLTHA P L +TLP F P+ LLT++ Q
Sbjct: 554 KAFLPRKWYHFDASFMKPLLTHATPSLEQTLPPFCLPLTSLLTSSRQ 600
>AF497829-1|AAM18107.1| 611|Caenorhabditis elegans putative Na-H
exchanger isoform 5b protein.
Length = 611
Score = 108 bits (259), Expect = 5e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAMLTTTSM 63
RA+ +YPLS+LLN+ R+P IP +QHM+ F+GLRGAM+FALA RNT +E RQ + TT+
Sbjct: 428 RALFVYPLSWLLNIRRRPKIPKRYQHMILFAGLRGAMAFALAGRNTSTENRQMIFATTTA 487
Query: 64 IVIATVVLQGGAATHALDYLRIPTGQGSNEESEALPYRDVRSPPD 108
+VI TV++ GG + +DYL+I G+ + EE + L SP D
Sbjct: 488 VVIVTVLVNGGLTSWMIDYLQIKHGKDAIEEGQRLENSMSSSPAD 532
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 167 KARLARVWGALDSRLLKPLLTHARPPLTETLPAFMRPVARLLTTTHQ 213
KA L R W D+ +KPLLTHA P L +TLP F P+ LLT++ Q
Sbjct: 554 KAFLPRKWYHFDASFMKPLLTHATPSLEQTLPPFCLPLTSLLTSSRQ 600
>AF497828-1|AAM18106.1| 630|Caenorhabditis elegans putative Na-H
exchanger isoform 5a protein.
Length = 630
Score = 108 bits (259), Expect = 5e-24
Identities = 52/105 (49%), Positives = 73/105 (69%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAMLTTTSM 63
RA+ +YPLS+LLN+ R+P IP +QHM+ F+GLRGAM+FALA RNT +E RQ + TT+
Sbjct: 428 RALFVYPLSWLLNIRRRPKIPKRYQHMILFAGLRGAMAFALAGRNTSTENRQMIFATTTA 487
Query: 64 IVIATVVLQGGAATHALDYLRIPTGQGSNEESEALPYRDVRSPPD 108
+VI TV++ GG + +DYL+I G+ + EE + L SP D
Sbjct: 488 VVIVTVLVNGGLTSWMIDYLQIKHGKDAIEEGQRLENSMSSSPAD 532
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 167 KARLARVWGALDSRLLKPLLTHARPPLTETLPAFMRPVARLLTTTHQ 213
KA L R W D+ +KPLLTHA P L +TLP F P+ LLT++ Q
Sbjct: 554 KAFLPRKWYHFDASFMKPLLTHATPSLEQTLPPFCLPLTSLLTSSRQ 600
>AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical
protein Y18D10A.6b protein.
Length = 655
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 1 MLGRAVNIYPLSFLLNLGRKP-PIPVNFQHMLFFSGLRGAMSFALAI-RNTVSEARQAML 58
+LGRA N++PL++L+N RK I + Q +++FSG+RGA+ FAL + + E + +L
Sbjct: 410 LLGRACNVFPLAYLVNQCRKDVQISMKNQIIMWFSGMRGAVCFALVLYMDLDKEKKSILL 469
Query: 59 TTTSMIVIATVVLQGGAATHALDYL 83
TT +++ T + GG+A + ++
Sbjct: 470 TTVLFLILFTTIFLGGSALPFISFI 494
>AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical
protein Y18D10A.6a protein.
Length = 681
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 1 MLGRAVNIYPLSFLLNLGRKP-PIPVNFQHMLFFSGLRGAMSFALAI-RNTVSEARQAML 58
+LGRA N++PL++L+N RK I + Q +++FSG+RGA+ FAL + + E + +L
Sbjct: 436 LLGRACNVFPLAYLVNQCRKDVQISMKNQIIMWFSGMRGAVCFALVLYMDLDKEKKSILL 495
Query: 59 TTTSMIVIATVVLQGGAATHALDYL 83
TT +++ T + GG+A + ++
Sbjct: 496 TTVLFLILFTTIFLGGSALPFISFI 520
>AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H
exchanger isoform 8b protein.
Length = 655
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 1 MLGRAVNIYPLSFLLNLGRKP-PIPVNFQHMLFFSGLRGAMSFALAI-RNTVSEARQAML 58
+LGRA N++PL++L+N RK I + Q +++FSG+RGA+ FAL + + E + +L
Sbjct: 410 LLGRACNVFPLAYLVNQCRKDVQISMKNQIIMWFSGMRGAVCFALVLYMDLDKEKKSILL 469
Query: 59 TTTSMIVIATVVLQGGAATHALDYL 83
TT +++ T + GG+A + ++
Sbjct: 470 TTVLFLILFTTIFLGGSALPFISFI 494
>AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H
exchanger isoform 8a protein.
Length = 681
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 1 MLGRAVNIYPLSFLLNLGRKP-PIPVNFQHMLFFSGLRGAMSFALAI-RNTVSEARQAML 58
+LGRA N++PL++L+N RK I + Q +++FSG+RGA+ FAL + + E + +L
Sbjct: 436 LLGRACNVFPLAYLVNQCRKDVQISMKNQIIMWFSGMRGAVCFALVLYMDLDKEKKSILL 495
Query: 59 TTTSMIVIATVVLQGGAATHALDYL 83
TT +++ T + GG+A + ++
Sbjct: 496 TTVLFLILFTTIFLGGSALPFISFI 520
>AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H
exchanger isoform 3 protein.
Length = 670
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I F+LN R V Q +L + GLRGA+++ L + S +A+ +T
Sbjct: 362 LIYRAIGIIVQCFILNKFRAKKFEVVDQFILSYGGLRGAIAYGLVVSIPASIQAKPMFIT 421
Query: 60 TTSMIVIATVVLQG 73
TT ++ TV LQG
Sbjct: 422 TTICVIYFTVFLQG 435
>AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchanger
protein 3, isoform b protein.
Length = 651
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I F+LN R V Q +L + GLRGA+++ L + S +A+ +T
Sbjct: 343 LIYRAIGIIVQCFILNKFRAKKFEVVDQFILSYGGLRGAIAYGLVVSIPASIQAKPMFIT 402
Query: 60 TTSMIVIATVVLQG 73
TT ++ TV LQG
Sbjct: 403 TTICVIYFTVFLQG 416
>AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchanger
protein 3, isoform a protein.
Length = 670
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I F+LN R V Q +L + GLRGA+++ L + S +A+ +T
Sbjct: 362 LIYRAIGIIVQCFILNKFRAKKFEVVDQFILSYGGLRGAIAYGLVVSIPASIQAKPMFIT 421
Query: 60 TTSMIVIATVVLQG 73
TT ++ TV LQG
Sbjct: 422 TTICVIYFTVFLQG 435
>Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSF--ALAIRNTVSEARQAMLTTT 61
R + ++ L+++ N R I + Q ++ F GLRGA+ F L I V A+ M++TT
Sbjct: 303 RFLVVFTLTWVANKWRMQKISLRDQTIMAFGGLRGAICFGLVLTIDGEVVPAKPIMISTT 362
Query: 62 SMIVIATVVLQGGAATHALDYLRI 85
++++ TV +QG + +L +
Sbjct: 363 LIVIVFTVFIQGTMIKPLVSFLNV 386
>Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSF--ALAIRNTVSEARQAMLTTT 61
R + ++ L+++ N R I + Q ++ F GLRGA+ F L I V A+ M++TT
Sbjct: 303 RFLVVFTLTWVANKWRMQKISLRDQTIMAFGGLRGAICFGLVLTIDGEVVPAKPIMISTT 362
Query: 62 SMIVIATVVLQGGAATHALDYLRI 85
++++ TV +QG + +L +
Sbjct: 363 LIVIVFTVFIQGTMIKPLVSFLNV 386
>AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H
exchanger isoform 1 protein.
Length = 479
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 4 RAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSF--ALAIRNTVSEARQAMLTTT 61
R + ++ L+++ N R I + Q ++ F GLRGA+ F L I V A+ M++TT
Sbjct: 302 RFLVVFTLTWVANKWRMQKISLRDQTIMAFGGLRGAICFGLVLTIDGEVVPAKPIMISTT 361
Query: 62 SMIVIATVVLQGGAATHALDYLRI 85
++++ TV +QG + +L +
Sbjct: 362 LIVIVFTVFIQGTMIKPLVSFLNV 385
>Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical
protein ZK822.3c protein.
Length = 606
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I ++LN R + Q ++ + GLRGA+++ L + S A+ +T
Sbjct: 302 LIYRAIGIVVQCYILNRFRAKKFEMVDQFIMSYGGLRGAIAYGLVVSIPASITAKPMFIT 361
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
T ++ TV LQG +++L+I
Sbjct: 362 ATIAVIYFTVFLQGITIRPLVNFLKI 387
>Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical
protein ZK822.3b protein.
Length = 667
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I ++LN R + Q ++ + GLRGA+++ L + S A+ +T
Sbjct: 362 LIYRAIGIVVQCYILNRFRAKKFEMVDQFIMSYGGLRGAIAYGLVVSIPASITAKPMFIT 421
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
T ++ TV LQG +++L+I
Sbjct: 422 ATIAVIYFTVFLQGITIRPLVNFLKI 447
>Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical
protein ZK822.3a protein.
Length = 647
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I ++LN R + Q ++ + GLRGA+++ L + S A+ +T
Sbjct: 342 LIYRAIGIVVQCYILNRFRAKKFEMVDQFIMSYGGLRGAIAYGLVVSIPASITAKPMFIT 401
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
T ++ TV LQG +++L+I
Sbjct: 402 ATIAVIYFTVFLQGITIRPLVNFLKI 427
>AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H
exchanger isoform 9b protein.
Length = 647
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I ++LN R + Q ++ + GLRGA+++ L + S A+ +T
Sbjct: 342 LIYRAIGIVVQCYILNRFRAKKFEMVDQFIMSYGGLRGAIAYGLVVSIPASITAKPMFIT 401
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
T ++ TV LQG +++L+I
Sbjct: 402 ATIAVIYFTVFLQGITIRPLVNFLKI 427
>AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H
exchanger isoform 9a protein.
Length = 667
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVS-EARQAMLT 59
++ RA+ I ++LN R + Q ++ + GLRGA+++ L + S A+ +T
Sbjct: 362 LIYRAIGIVVQCYILNRFRAKKFEMVDQFIMSYGGLRGAIAYGLVVSIPASITAKPMFIT 421
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
T ++ TV LQG +++L+I
Sbjct: 422 ATIAVIYFTVFLQGITIRPLVNFLKI 447
>M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiporter
protein.
Length = 609
Score = 41.1 bits (92), Expect = 9e-04
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAM-LT 59
++ RA+ I ++LN R + Q ++ + GLRGA+++ L + S R+ M +T
Sbjct: 305 LIYRAIGIVVQCYILNRFRAKKFEMVDQFIMSYGGLRGAIAYGLVVSIPASITRKPMFIT 364
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
T + TV LQG +++L+I
Sbjct: 365 ATIAWIYFTVFLQGITIRPLVNFLKI 390
>U28737-5|AAA68274.1| 684|Caenorhabditis elegans Na/h exchanger
protein 4, isoform b protein.
Length = 684
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 11 LSFLLNL--GRKPPIPVNFQHMLFFSGLRGAMSFALA--IRNTVSEARQAMLTTTSMIVI 66
LS NL K IP Q ++ +G+RGA+ F L I + A+ +TTT ++
Sbjct: 368 LSAFYNLFASEKNRIPFTDQLVVTHAGIRGAVCFGLVQIIDERIIPAKPYFVTTTLAMIF 427
Query: 67 ATVVLQGGAATHALDYLRIPTGQGSNEE 94
T +LQG + L+IP G+ ++
Sbjct: 428 VTSILQGCTIKFVMKCLKIPGDDGTKQK 455
>U28737-4|AAM48522.1| 749|Caenorhabditis elegans Na/h exchanger
protein 4, isoform a protein.
Length = 749
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 11 LSFLLNL--GRKPPIPVNFQHMLFFSGLRGAMSFALA--IRNTVSEARQAMLTTTSMIVI 66
LS NL K IP Q ++ +G+RGA+ F L I + A+ +TTT ++
Sbjct: 433 LSAFYNLFASEKNRIPFTDQLVVTHAGIRGAVCFGLVQIIDERIIPAKPYFVTTTLAMIF 492
Query: 67 ATVVLQGGAATHALDYLRIPTGQGSNEE 94
T +LQG + L+IP G+ ++
Sbjct: 493 VTSILQGCTIKFVMKCLKIPGDDGTKQK 520
>AF497827-1|AAM18105.1| 684|Caenorhabditis elegans putative Na-H
exchanger isoform 4b protein.
Length = 684
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 11 LSFLLNL--GRKPPIPVNFQHMLFFSGLRGAMSFALA--IRNTVSEARQAMLTTTSMIVI 66
LS NL K IP Q ++ +G+RGA+ F L I + A+ +TTT ++
Sbjct: 368 LSAFYNLFASEKNRIPFTDQLVVTHAGIRGAVCFGLVQIIDERIIPAKPYFVTTTLAMIF 427
Query: 67 ATVVLQGGAATHALDYLRIPTGQGSNEE 94
T +LQG + L+IP G+ ++
Sbjct: 428 VTSILQGCTIKFVMKCLKIPGDDGTKQK 455
>AF497826-1|AAM18104.1| 749|Caenorhabditis elegans putative Na-H
exchanger isoform 4a protein.
Length = 749
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 11 LSFLLNL--GRKPPIPVNFQHMLFFSGLRGAMSFALA--IRNTVSEARQAMLTTTSMIVI 66
LS NL K IP Q ++ +G+RGA+ F L I + A+ +TTT ++
Sbjct: 433 LSAFYNLFASEKNRIPFTDQLVVTHAGIRGAVCFGLVQIIDERIIPAKPYFVTTTLAMIF 492
Query: 67 ATVVLQGGAATHALDYLRIPTGQGSNEE 94
T +LQG + L+IP G+ ++
Sbjct: 493 VTSILQGCTIKFVMKCLKIPGDDGTKQK 520
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 28 QHMLFFSGLRGAMSFALAIRNTVS-EARQAMLTTTSMIVIATVVLQGGAATHALDYLRI 85
Q ++ + GLRGA+SF+L + + + + ML T +++ T ++QG + +L I
Sbjct: 464 QFIMSYGGLRGAVSFSLVFMISANPDVKNTMLGATYAVILFTNIIQGSTIKLFVKWLNI 522
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 28 QHMLFFSGLRGAMSFALAIRNTVS-EARQAMLTTTSMIVIATVVLQGGAATHALDYLRI 85
Q ++ + GLRGA+SF+L + + + + ML T +++ T ++QG + +L I
Sbjct: 464 QFIMSYGGLRGAVSFSLVFMISANPDVKNTMLGATYAVILFTNIIQGSTIKLFVKWLNI 522
>U21317-1|AAA62524.2| 627|Caenorhabditis elegans Na/h exchanger
protein 2 protein.
Length = 627
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAMLTT 60
++ R + + + + LN R Q ++ + GLRGA+++ L + + M T
Sbjct: 357 LIYRTLGVVVMCYFLNKYRLNKYTKVDQFIMAYGGLRGAIAYGLVVAIPDFIPGKNMFVT 416
Query: 61 TSMIVI-ATVVLQGGAATHALDYLRI 85
+ +IVI TV LQG ++L++
Sbjct: 417 SCIIVIYFTVFLQGITLKPIAEFLQV 442
>AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H
exchanger isoform 2 protein.
Length = 644
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIRNTVSEARQAMLTT 60
++ R + + + + LN R Q ++ + GLRGA+++ L + + M T
Sbjct: 374 LIYRTLGVVVMCYFLNKYRLNKYTKVDQFIMAYGGLRGAIAYGLVVAIPDFIPGKNMFVT 433
Query: 61 TSMIVI-ATVVLQGGAATHALDYLRI 85
+ +IVI TV LQG ++L++
Sbjct: 434 SCIIVIYFTVFLQGITLKPIAEFLQV 459
>AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H
exchanger isoform 6 protein.
Length = 533
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIR-NTVSEARQAMLT 59
++ R + + + LN R Q ++ + GLRGA+++ L + A+ +T
Sbjct: 375 LIYRTLGVVVMCHFLNKYRLNKYTKVDQFIMAYGGLRGAIAYGLVVAIPDFIPAKNMFVT 434
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
+ +++ TV LQG ++L++
Sbjct: 435 SCIIVIYFTVFLQGITLKPIAEFLQV 460
>AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchanger
protein 6, isoform a protein.
Length = 538
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIR-NTVSEARQAMLT 59
++ R + + + LN R Q ++ + GLRGA+++ L + A+ +T
Sbjct: 375 LIYRTLGVVVMCHFLNKYRLNKYTKVDQFIMAYGGLRGAIAYGLVVAIPDFIPAKNMFVT 434
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
+ +++ TV LQG ++L++
Sbjct: 435 SCIIVIYFTVFLQGITLKPIAEFLQV 460
>AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchanger
protein 6, isoform b protein.
Length = 634
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MLGRAVNIYPLSFLLNLGRKPPIPVNFQHMLFFSGLRGAMSFALAIR-NTVSEARQAMLT 59
++ R + + + LN R Q ++ + GLRGA+++ L + A+ +T
Sbjct: 375 LIYRTLGVVVMCHFLNKYRLNKYTKVDQFIMAYGGLRGAIAYGLVVAIPDFIPAKNMFVT 434
Query: 60 TTSMIVIATVVLQGGAATHALDYLRI 85
+ +++ TV LQG ++L++
Sbjct: 435 SCIIVIYFTVFLQGITLKPIAEFLQV 460
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 187 THARPPLTETLPAFMRPVARLLTTTHQYTQGDNTLRRTDSDSDLCIDDPQIPSSIDPQQS 246
T PP T T P R + H + N L TD D D + S P+ S
Sbjct: 348 TSPAPPPTSTTPTSRREANMERFSRHTHAHA-NRLYSTDDDDDSSPESRPSTRSTSPRHS 406
Query: 247 MRGEIQKAYCLVHRTSSAAATDILALIQLLMEPGYKCPKVSSL 289
+ A+ H TS A D ++ +++ + P+ S L
Sbjct: 407 LATPSSYAHDTCHDTSLPDA-DTRSIDSGVVQSDHSNPQQSGL 448
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 187 THARPPLTETLPAFMRPVARLLTTTHQYTQGDNTLRRTDSDSDLCIDDPQIPSSIDPQQS 246
T PP T T P R + H + N L TD D D + S P+ S
Sbjct: 423 TSPAPPPTSTTPTSRREANMERFSRHTHAHA-NRLYSTDDDDDSSPESRPSTRSTSPRHS 481
Query: 247 MRGEIQKAYCLVHRTSSAAATDILALIQLLMEPGYKCPKVSSL 289
+ A+ H TS A D ++ +++ + P+ S L
Sbjct: 482 LATPSSYAHDTCHDTSLPDA-DTRSIDSGVVQSDHSNPQQSGL 523
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 187 THARPPLTETLPAFMRPVARLLTTTHQYTQGDNTLRRTDSDSDLCIDDPQIPSSIDPQQS 246
T PP T T P R + H + N L TD D D + S P+ S
Sbjct: 357 TSPAPPPTSTTPTSRREANMERFSRHTHAHA-NRLYSTDDDDDSSPESRPSTRSTSPRHS 415
Query: 247 MRGEIQKAYCLVHRTSSAAATDILALIQLLMEPGYKCPKVSSL 289
+ A+ H TS A D ++ +++ + P+ S L
Sbjct: 416 LATPSSYAHDTCHDTSLPDA-DTRSIDSGVVQSDHSNPQQSGL 457
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 187 THARPPLTETLPAFMRPVARLLTTTHQYTQGDNTLRRTDSDSDLCIDDPQIPSSIDPQQS 246
T PP T T P R + H + N L TD D D + S P+ S
Sbjct: 501 TSPAPPPTSTTPTSRREANMERFSRHTHAHA-NRLYSTDDDDDSSPESRPSTRSTSPRHS 559
Query: 247 MRGEIQKAYCLVHRTSSAAATDILALIQLLMEPGYKCPKVSSL 289
+ A+ H TS A D ++ +++ + P+ S L
Sbjct: 560 LATPSSYAHDTCHDTSLPDA-DTRSIDSGVVQSDHSNPQQSGL 601
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 187 THARPPLTETLPAFMRPVARLLTTTHQYTQGDNTLRRTDSDSDLCIDDPQIPSSIDPQQS 246
T PP T T P R + H + N L TD D D + S P+ S
Sbjct: 348 TSPAPPPTSTTPTSRREANMERFSRHTHAHA-NRLYSTDDDDDSSPESRPSTRSTSPRHS 406
Query: 247 MRGEIQKAYCLVHRTSSAAATDILALIQLLMEPGYKCPKVSSL 289
+ A+ H TS A D ++ +++ + P+ S L
Sbjct: 407 LATPSSYAHDTCHDTSLPDA-DTRSIDSGVVQSDHSNPQQSGL 448
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 53 ARQAMLTTTSMIVIATVVLQGGAATHALDYLRIPT 87
A Q ++ S+ +A ++ G AATH LD+ PT
Sbjct: 276 ASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPT 310
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.135 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,710,366
Number of Sequences: 27539
Number of extensions: 259560
Number of successful extensions: 549
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 502
Number of HSP's gapped (non-prelim): 41
length of query: 291
length of database: 12,573,161
effective HSP length: 81
effective length of query: 210
effective length of database: 10,342,502
effective search space: 2171925420
effective search space used: 2171925420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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