GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002637-TA|BGIBMGA002637-PA|IPR006153|Sodium/hydrogen
exchanger
         (112 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    58   7e-11
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   1.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   2.6  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 58.0 bits (134), Expect = 7e-11
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 1   MTKFT-HVRDWPLLESALFVLMSYAAFLIAEVCELTGVVAVLFCGICQAHYTYNNLSSDS 59
           +T+FT HVR   ++E     +M+Y A+L AE+  ++G++A+ FCGI   +Y   N+S  S
Sbjct: 465 VTRFTDHVR---VIEPIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVEQNVSHKS 521

Query: 60  RNRTKQXXXXXXXXXXXXXXTYIGVSMFTFPKHHFDPWFII 100
               K                ++GV+     KH ++ WF++
Sbjct: 522 HTTIKYALKMLSSSAETIIFMFLGVATVN-NKHVWNTWFVL 561


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 11  PLLESALFVLMSYAAFLIAEVCELTGVVAVLFCGICQAHYTY 52
           PL +  L  L      +I   C +  VVA L   +   +YTY
Sbjct: 827 PLEQMTLSDLCVDRTHMIVLTCVIVSVVACLVAALSLVYYTY 868


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)

Query: 24  AAFLIAEVCELTGVVAVLFCGICQAHYTYNNLSSDSRNR 62
           AA L   VC   GVV VLF  +C   +TY  +      R
Sbjct: 580 AAVLHLAVCTAVGVVVVLF--LC---FTYTKIERSGNAR 613


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.333    0.141    0.462 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,816
Number of Sequences: 2123
Number of extensions: 2584
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 112
length of database: 516,269
effective HSP length: 56
effective length of query: 56
effective length of database: 397,381
effective search space: 22253336
effective search space used: 22253336
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.6 bits)
S2: 43 (21.4 bits)