Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002632-TA|BGIBMGA002632-PA|IPR002616|Queuine/other
tRNA-ribosyltransferase,
IPR005135|Endonuclease/exonuclease/phosphatase
(927 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-32|CAC51046.1| 373|Caenorhabditis elegans Hypothetical... 151 3e-36
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 101 2e-21
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 99 1e-20
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 97 5e-20
Z73899-4|CAA98076.1| 400|Caenorhabditis elegans Hypothetical pr... 93 8e-19
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 77 6e-14
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 41 0.005
AC006645-8|AAF39848.1| 452|Caenorhabditis elegans Hypothetical ... 36 0.13
Z19154-7|CAC35885.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.8
U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate trans... 30 6.6
U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate trans... 30 6.6
U40952-12|AAA81745.1| 297|Caenorhabditis elegans Hypothetical p... 30 6.6
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 30 6.6
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 30 6.6
D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate trans... 30 6.6
D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate trans... 30 6.6
AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical ... 30 6.6
Z81476-8|CAB03917.1| 160|Caenorhabditis elegans Hypothetical pr... 30 8.7
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 30 8.7
>AL132948-32|CAC51046.1| 373|Caenorhabditis elegans Hypothetical
protein Y39B6A.35 protein.
Length = 373
Score = 151 bits (365), Expect = 3e-36
Identities = 96/339 (28%), Positives = 170/339 (50%), Gaps = 15/339 (4%)
Query: 538 VVHLTAEVLAKVFP--DTQLLWLPLSNSVQLENGVKAQGEGVAKFAGLPKHV-ICATLYN 594
+ HLT EV T + + L V ++ G+G AKF G+P + T ++
Sbjct: 42 IPHLTWEVAENQLKLEQTHIFQMTLPTLVSNAKIIEKFGKGAAKFCGMPAGAAVHLTPFD 101
Query: 595 INEIVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRISLNEKPKRI 654
+P G+ + + +WT NGK + + +++ +F I D + K++
Sbjct: 102 PLGKLPGGYNDSKSVAIWTANGKVSLDVKMWREIINSFGCGSIETLVDYDTPKDVGQKKL 161
Query: 655 VKSVERTMALLDSCINKYKASEELQQSSLVGVIVAANIPHKCEECIRHILKYKETLVG-- 712
VK+V+RT + ++ E++ +V + + H+ +C + E + G
Sbjct: 162 VKAVDRTKTFQEQL---FQQDEKVNGERIVSLGGGFSKYHR-RKCAVDV-GLAENIAGYT 216
Query: 713 VALAGLTDGSKESYEVSLDKLKEIFSRVGGSLPNDLLRIVEGSWNPAVIVTAIEHGWDVF 772
V T+G + + + L+E FS LP LR + G +NP ++ ++ G D+F
Sbjct: 217 VEFREFTEGKETDDKEMKELLEETFS----PLPPTKLRCISGPFNPKTVLFLVQQGIDLF 272
Query: 773 DGSYPIKLTNKGHALSLNFDVYRYSGDPCIMDLNDIRYNEDFKPILEGCECLTCKKHTRA 832
D S+P+KL +GHA L+ D + S ++D N+ ++ +DF + +GC C TC K+T+
Sbjct: 273 DSSFPVKLAEEGHAFCLSDD-FPTSSKYEVVDFNNEKFADDFTALFDGCACYTCTKYTKG 331
Query: 833 YIRHLLNTREMLASVLLSIHNLHHFNEFFVQARLHISAS 871
Y++HLLNTRE+LAS+LL IHN+ +++ F R + S
Sbjct: 332 YLQHLLNTRELLASILLVIHNMTEYDKMFKLIRSSLENS 370
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 101 bits (243), Expect = 2e-21
Identities = 120/505 (23%), Positives = 203/505 (40%), Gaps = 33/505 (6%)
Query: 31 LYSGKEEDATREYGVGXXXXXXXXXXXXXWKPVSERIICARYGHDSTRVRKVTVIQCYAP 90
++ GK +++ GVG + +S RI + +R TVIQ YAP
Sbjct: 167 VFLGKRNESSVSGGVGFIVRSTLLPKIVEVRFLSHRIGLLTF--KVSRKFNCTVIQVYAP 224
Query: 91 TNSASTDVKSQFYEQLGHTLKGIKKQDIVILMGDINAKMGNDNVDREYYMGQYGATGTIN 150
T + + FY+ + + + + +++GD NA+MG + E Y+G + A N
Sbjct: 225 TADSDLEEICDFYDSVEDVFRECRSK-YKLVIGDFNARMGCRQ-NNERYIGPH-AMEPRN 281
Query: 151 ENGELFGDLCSTHGLVIGGTLFKHKECHKVTWISPDGKTKNQIDHVAISKTWRSSLLDVR 210
+ GEL C T+ L ++FK + T++SPDG +++IDH+ + + + D
Sbjct: 282 DTGELLATFCETNRLWHTNSMFKKPMHKRWTFVSPDGNHRHEIDHILANGKF---VTDTT 338
Query: 211 NKRGADIDSDHHLVVAEVRL-----KI-AVPHRKPDK----AARKFYIRKLEDSNCREKF 260
SDH L+ + K+ V RKP K A + I
Sbjct: 339 VLPSFTNGSDHRLLRCNLHFNNCLAKLEQVRRRKPPKRVLDPAIAYAISATVTVQSDPDL 398
Query: 261 SLSLKNSFELLKEIEDEQMDETWDRIRGAIIKLLRKYWGIPIQSKNLGYAMLRREYSSMR 320
N + LKE++D+ + + + + RK + +K ++ S+
Sbjct: 399 DTDYDNLIQSLKELQDQAIVRPANHSSNRLSEETRK-----LLNKRRFMDRNDPQFKSIS 453
Query: 321 LVIRKLARRDQRNAIDELADRAKLAAKRQDMKELYDVTKRIINKKHHPRKKPLKDCSGQL 380
R+ ++D + A L+A Q K L V + I ++ LK S
Sbjct: 454 DKCREAVQKDH----EAFASTRLLSAANQ-KKSLKRVARDI--NEYKSVIPCLKSTSTGE 506
Query: 381 LCTTEEQLVRWTEHFTKLLSKCQSQPTDGISVXXXXXXXXXXXXTFNEIVKAIKQLKPGK 440
T+ ++ + E F L K + S+ EI ++ GK
Sbjct: 507 RITSRVKMEQEIEKFYTELFKSAVSNSQTSSIPATATPPPFLP---EEIRHVLRSFPNGK 563
Query: 441 APGIDNINAEMLKADAPRSASLLYPLIVRIWETEQIPSQWKQGLLVKVPKKGDLSSCDNW 500
A G D I+A+ LK+ L+ R + +P WK + KKGD + +N+
Sbjct: 564 AAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENY 623
Query: 501 RGITLLPCAAKVLARLLLNRMSKKI 525
R I LLP KV + LLNRM + +
Sbjct: 624 RPICLLPVLYKVFTKCLLNRMRRSL 648
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 99.1 bits (236), Expect = 1e-20
Identities = 116/478 (24%), Positives = 195/478 (40%), Gaps = 34/478 (7%)
Query: 61 KPVSERIICARYGHDSTRVRK---VTVIQCYAPTNSASTDVKSQFYEQLGHTLKGIKKQD 117
K V R + R G + +V + TVIQ YAPT + FY+ + + + +
Sbjct: 21 KIVEVRFLSHRIGLLTFKVSRKFNCTVIQVYAPTADLDLEEICDFYDSVEDVFRECRSK- 79
Query: 118 IVILMGDINAKMGNDNVDREYYMGQYGATGTINENGELFGDLCSTHGLVIGGTLFKHKEC 177
+++GD NA+MG + E Y+G + A N+ GEL C T+ L ++FK
Sbjct: 80 YKLVIGDFNARMGCRQ-NNERYIGPH-AMEPRNDTGELLTTFCETNRLWHTNSMFKKPMH 137
Query: 178 HKVTWISPDGKTKNQIDHVAISKTWRSSLLDVRNKRGADIDSDHHLVVAEVRL-----KI 232
+ T++SPDG +++IDH+ + + + D SDH L+ + K+
Sbjct: 138 KRWTFVSPDGNHRHEIDHILANGKF---VTDTTVLPSFTNGSDHRLLRCNLHFNNCLAKL 194
Query: 233 -AVPHRKPDK----AARKFYIRKLEDSNCREKFSLSLKNSFELLKEIEDEQMDETWDRIR 287
V RKP K A + I + N + LKE++D+ + +
Sbjct: 195 EQVRRRKPPKRVLDPAIAYEISATVTVQSDPDLEIDYDNLIQSLKELQDQAIVRPANHSS 254
Query: 288 GAIIKLLRKYWGIPIQSKNLGYAMLRREYSSMRLVIRKLARRDQRNAIDELADRAKLAAK 347
+ + RK + +K ++ S+ R+ ++D + A L+A
Sbjct: 255 NRLSEETRK-----LLNKRRFMDRNDPQFKSISDKCREAVQKDH----EAFASTRLLSAA 305
Query: 348 RQDMKELYDVTKRIINKKHHPRKKPLKDCSGQLLCTTEEQLVRWTEHFTKLLSKCQSQPT 407
Q K L V + I ++ LK S T+ ++ + E F K +
Sbjct: 306 NQ-KKSLKRVARDI--NEYKSVIPCLKSTSTGERITSRVKMEQEIEKFYTEFFKSAVSNS 362
Query: 408 DGISVXXXXXXXXXXXXTFNEIVKAIKQLKPGKAPGIDNINAEMLKADAPRSASLLYPLI 467
S+ +I A++ GKA G D I+A+ LK+ L+
Sbjct: 363 QASSIPTTATPPPFLP---EKIRYALRSFPNGKAAGQDKISADFLKSCHDNVIDLITDRF 419
Query: 468 VRIWETEQIPSQWKQGLLVKVPKKGDLSSCDNWRGITLLPCAAKVLARLLLNRMSKKI 525
R + +P WK + KKGD + +N+R I LLP KV + LLNRM + +
Sbjct: 420 NRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL 477
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 97.1 bits (231), Expect = 5e-20
Identities = 107/424 (25%), Positives = 168/424 (39%), Gaps = 28/424 (6%)
Query: 81 KVTVIQCYAPTNSASTDVKSQFYEQLGHTLKGIKKQDIVILMGDINAKMGNDNVDREYYM 140
K TVIQ YAPT ++ D S FYE+L T + + +++GD NA++GN + E Y+
Sbjct: 59 KCTVIQVYAPTAVSTLDEISDFYEKLEDTYHACRSK-YKLIIGDFNARVGNRKDETERYI 117
Query: 141 GQYGATGTINENGELFGDLCSTHGLVIGGTLFKHKECHKVTWISPDGKTKNQIDHVAISK 200
G + A N+ GE+ C ++ L + F + T +SPDG K++IDH+ +
Sbjct: 118 GTH-AMEPRNDTGEILATFCESNRLWHINSQFYKPINRRWTHVSPDGMFKHEIDHILANG 176
Query: 201 TWRSSLLDVRNKRGADIDSDHHLVVAEVRLKI------AVPHRKPDK----AARKFYIRK 250
+ + D SDH L+ + + I V RKP K A +
Sbjct: 177 KF---VTDTSVLPSFTNGSDHRLLRSNIHFNINLAKLDQVKRRKPPKRVLDKATALAVSA 233
Query: 251 LEDSNCREKFSLSLKNSFELLKEIEDEQMDETWDRIRGAIIKLLRKYWGIPIQSKNLGYA 310
+ K + LK +D+ + + + + K R+ + K L
Sbjct: 234 TITAPAHGDIDEDYKILVDSLKTAQDQSVIQPSNHSANRLSKETRQM----LFKKRL-MD 288
Query: 311 MLRREYSSMRLVIRKLARRDQRNAIDELADRAKLAAKRQDMKELYDVTKRIINKKHHPRK 370
+ S+ + R+ RD N A+L Q K + V + + ++
Sbjct: 289 RSDPNFKSLSIKCREAVERDHENFAS-----ARLLNAAQSRKSMKRVARDL--NEYKSFI 341
Query: 371 KPLKDCSGQLLCTTEEQLVRWTEHF-TKLLSKCQSQPTDGISVXXXXXXXXXXXXTFNEI 429
LK S T+ E++ R E F T L ++ P + F EI
Sbjct: 342 PSLKCSSTGERITSREKMEREIEMFYTSLFRSRKTPPPPQLPTPPPIMAEPLPPFLFGEI 401
Query: 430 VKAIKQLKPGKAPGIDNINAEMLKADAPRSASLLYPLIVRIWETEQIPSQWKQGLLVKVP 489
AI GKA G D I A+ LK+ L+ R E+ IP WK +
Sbjct: 402 RAAINSFPNGKAAGSDKITADFLKSCGDYVIRLITGRFNRYLESGNIPKDWKTSKTTLIF 461
Query: 490 KKGD 493
KKGD
Sbjct: 462 KKGD 465
>Z73899-4|CAA98076.1| 400|Caenorhabditis elegans Hypothetical
protein ZK829.6 protein.
Length = 400
Score = 93.1 bits (221), Expect = 8e-19
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 623 DKYMDLMETFKPDIILAASDGRISLNEKPKRIVKSVERTMALLDSCINKYKASEELQQSS 682
+K +++ + DI++ D I + + +++ R++ LD C + ++
Sbjct: 125 EKSIEIQQALGADIMMQL-DHVIHVLTTGDIVKEAMHRSIRWLDRCKVAHTRDDQAMFPI 183
Query: 683 LVGVIVAANIPHKCEECIRHILKYKETLVGVALAGLTDGSKESYEVSLDKLKEIFSRVGG 742
L G + N+ + +EC + + K + VG+A+ GL+ G ++ D + +
Sbjct: 184 LQGGL---NLELR-KECAKEMAKRAK--VGIAIGGLSGGEEK------DHFWRVVAACCA 231
Query: 743 SLPNDLLRIVEGSWNPAVIVTAIEHGWDVFDGSYPIKLTNKGHALSLNFDVYRYSGDPCI 802
+LP L R V G P +V G D+FD YP + G A+ R G +
Sbjct: 232 ALPPHLPRYVMGVGFPVDLVICSFLGADMFDCVYPTRTARFGTAM------VRRGG---L 282
Query: 803 MDLNDIRYNEDFKPILEGCECLTCKKHTRAYIRHLLNTREMLASVLLSIHNLHHFNEFFV 862
M LN RY EDF PI + CEC TCK +TRAYI H + +E + L+S+HN+ H +
Sbjct: 283 MQLNQKRYKEDFLPIDKKCECNTCKNYTRAYI-HSIVGKETVGCHLVSVHNIKHQLDLMR 341
Query: 863 QARLHISASTFNIYKKHIITQY----ENINP-KLDNEEDKTAPTLVQD 905
R I +++ + K + Y ++ NP K D+E+ + P V+D
Sbjct: 342 DVRQAIQSNSVEQFLKQFLYDYYGPIQSENPSKQDSEKMREVPQWVRD 389
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 77.0 bits (181), Expect = 6e-14
Identities = 94/401 (23%), Positives = 156/401 (38%), Gaps = 29/401 (7%)
Query: 135 DREYYMGQYGATGTINENGELFGDLCSTHGLVIGGTLFKHKECHKVTWISPDGKTKNQID 194
+ E Y+G + A N+ GEL C T+ L ++FK + T++SPDG +++ID
Sbjct: 6 NNERYIGPH-AMEPRNDTGELLATFCETNRLWHTNSMFKKPMHKRWTFVSPDGNHRHEID 64
Query: 195 HVAISKTWRSSLLDVRNKRGADIDSDHHLVVAEVRLKIA------VPHRKPDKA----AR 244
H+ + + + D SDH L+ + V RKP K A
Sbjct: 65 HILANGKF---VTDTTVLPSFTNGSDHRLLRCNLHFNNCLAKLEQVRRRKPPKRVLDPAI 121
Query: 245 KFYIRKLEDSNCREKFSLSLKNSFELLKEIEDEQMDETWDRIRGAIIKLLRKYWGIPIQS 304
+ I N + LKE++D+ + + + + RK + +
Sbjct: 122 AYAISATVTVQSDPDLDTDYDNLIQSLKELQDQAIVRPANHSSNRLSEETRK-----LLN 176
Query: 305 KNLGYAMLRREYSSMRLVIRKLARRDQRNAIDELADRAKLAAKRQDMKELYDVTKRIINK 364
K ++ S+ R+ ++D + A L+A Q K L V + I
Sbjct: 177 KRRFMDRNDPQFKSISDKCREAVQKDH----EAFASTRLLSAANQK-KSLKRVARDI--N 229
Query: 365 KHHPRKKPLKDCSGQLLCTTEEQLVRWTEHFTKLLSKCQSQPTDGISVXXXXXXXXXXXX 424
++ LK S T+ ++ + E F L K + S+
Sbjct: 230 EYKSVIPCLKSTSTGERITSRVKMEQEIEKFYTELFKSAVSNSQTSSIPATATPPPFLP- 288
Query: 425 TFNEIVKAIKQLKPGKAPGIDNINAEMLKADAPRSASLLYPLIVRIWETEQIPSQWKQGL 484
EI ++ GKA G D I+A+ LK+ L+ R + +P WK
Sbjct: 289 --EEIRHVLRSFPNGKAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSK 346
Query: 485 LVKVPKKGDLSSCDNWRGITLLPCAAKVLARLLLNRMSKKI 525
+ KKGD + +N+R I LLP KV + LLNRM + +
Sbjct: 347 TTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL 387
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 40.7 bits (91), Expect = 0.005
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 7/177 (3%)
Query: 432 AIKQLKPGKAPGIDNINAEMLKADAPRSASLLYPLIVRIWETEQIPSQWKQGLLVKVPK- 490
AIK + P A G D I ++ S L L T IP +WK+ ++ +PK
Sbjct: 337 AIK-MSPSAAIGPDGIAQIHIRKLPMCGYSFLAYLYNVSLSTNIIPDKWKKANVIMIPKP 395
Query: 491 KGDLSSCDNWRGITLLPCAAKVLARLLLNRMSKKITGLFGRSKQGCSVVHLTAEVLAKVF 550
K D + ++R I+LL AK+L + +L R+ I + G H T + +V
Sbjct: 396 KKDPAIASSYRPISLLSPIAKLLEKAILKRIKNSIES--PAHQHGFKPEHSTTTAVIQVT 453
Query: 551 PDTQLLWLPLSNSVQLENGVKAQGEGVAKFAGLPKHVICATLYNINEIVPPGHFELG 607
D + L + N E + A + A F +P +C L I P LG
Sbjct: 454 NDI-IGGLNMKNPP--ERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLG 507
>AC006645-8|AAF39848.1| 452|Caenorhabditis elegans Hypothetical
protein F56A4.10 protein.
Length = 452
Score = 35.9 bits (79), Expect = 0.13
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 503 ITLLPCAAKVLARLLLNRMSKKITGLFGRSK----QGCSVVHLTAEVLAKVFPDTQLLWL 558
+T LP +A+ R+S K+TGL R++ + L A ++ F +++
Sbjct: 261 LTALPFILSAIAKFSAGRISDKLTGLSERARFVFFASIFQIGLVAGLVVMAFTTNRVIAQ 320
Query: 559 PLSNSVQLENGVKAQGEGVAKFAGLPKHVICATL 592
N + +G+ G V KFA LPK++I L
Sbjct: 321 IAFNFAIVSSGLNIMG--VVKFADLPKNLIFVNL 352
>Z19154-7|CAC35885.2| 388|Caenorhabditis elegans Hypothetical
protein C40H1.7 protein.
Length = 388
Score = 31.5 bits (68), Expect = 2.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 772 FDGSYPIKLTNKGHALSLNFDVYRYSGDPCIMDLNDIRYNEDFKPILE 819
F S L+N HA N D+YR+S D C + ED++PI E
Sbjct: 309 FCSSQVQNLSNADHAHYFNMDLYRWSADGC------PKNKEDYRPIAE 350
>U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate
transporter family protein1, isoform b protein.
Length = 492
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 598 IVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRIS---LNEKPKRI 654
++ PG + K GK + T D +DL+ P+ ++ A+ ++ + +PK +
Sbjct: 104 VIHPGDPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFPENVVQATFQQVQTKYIKVRPKVV 163
Query: 655 VKSVERTMALLDS-CINKYKASEELQQS-SLVGVIV 688
+ T+A L++ ++ KAS E +++GVIV
Sbjct: 164 KNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIV 199
>U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate
transporter family protein1, isoform a protein.
Length = 503
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 598 IVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRIS---LNEKPKRI 654
++ PG + K GK + T D +DL+ P+ ++ A+ ++ + +PK +
Sbjct: 115 VIHPGDPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFPENVVQATFQQVQTKYIKVRPKVV 174
Query: 655 VKSVERTMALLDS-CINKYKASEELQQS-SLVGVIV 688
+ T+A L++ ++ KAS E +++GVIV
Sbjct: 175 KNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIV 210
>U40952-12|AAA81745.1| 297|Caenorhabditis elegans Hypothetical
protein C03B1.1 protein.
Length = 297
Score = 30.3 bits (65), Expect = 6.6
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 637 ILAASDGRISLNEKPKRIVKSVERTMALLDSCINKYKASEELQQSSLVGVIVAANIPHKC 696
+L A++ SL K R VKS R + C N K SSL IV ++
Sbjct: 1 MLPAANASNSLPRKSMRTVKSSRRRSLAPNECFNTEKEKGNDLFSSLHRKIVKTVRRYEA 60
Query: 697 E--ECIRHILKYKETLVGVALAGLTDGSKE--SYEVSLDKLKEIFSRVGGSL 744
+ E RHI + + + AG KE Y ++ + + F+ +GG +
Sbjct: 61 DGNEDQRHIRRKTSIIDAIRSAGTHSDDKEVCEYWRMINYVDQNFNLIGGMI 112
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 598 IVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRIS---LNEKPKRI 654
++ PG + K GK + T D +DL+ P+ ++ A+ ++ + +PK +
Sbjct: 104 VIHPGDPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFPENVVQATFQQVQTKYIKVRPKVV 163
Query: 655 VKSVERTMALLDS-CINKYKASEELQQS-SLVGVIV 688
+ T+A L++ ++ KAS E +++GVIV
Sbjct: 164 KNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIV 199
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 598 IVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRIS---LNEKPKRI 654
++ PG + K GK + T D +DL+ P+ ++ A+ ++ + +PK +
Sbjct: 115 VIHPGDPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFPENVVQATFQQVQTKYIKVRPKVV 174
Query: 655 VKSVERTMALLDS-CINKYKASEELQQS-SLVGVIV 688
+ T+A L++ ++ KAS E +++GVIV
Sbjct: 175 KNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIV 210
>D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 598 IVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRIS---LNEKPKRI 654
++ PG + K GK + T D +DL+ P+ ++ A+ ++ + +PK +
Sbjct: 115 VIHPGDPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFPENVVQATFQQVQTKYIKVRPKVV 174
Query: 655 VKSVERTMALLDS-CINKYKASEELQQS-SLVGVIV 688
+ T+A L++ ++ KAS E +++GVIV
Sbjct: 175 KNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIV 210
>D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 598 IVPPGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRIS---LNEKPKRI 654
++ PG + K GK + T D +DL+ P+ ++ A+ ++ + +PK +
Sbjct: 115 VIHPGDPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFPENVVQATFQQVQTKYIKVRPKVV 174
Query: 655 VKSVERTMALLDS-CINKYKASEELQQS-SLVGVIV 688
+ T+A L++ ++ KAS E +++GVIV
Sbjct: 175 KNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIV 210
>AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical
protein H37A05.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 550 FPDTQLLWLPLSNSVQLENGVKAQGEGVAKFAGLPKHVICATLYNINEIVPPGHFE 605
FP + +L LP S ++ G E V K AGL + ++ T++N N PG F+
Sbjct: 364 FPASVILMLPFILSFSVKLGENINEESVEKMAGLIEDLV--TVHNSNLSKFPGFFK 417
>Z81476-8|CAB03917.1| 160|Caenorhabditis elegans Hypothetical
protein C25F9.9 protein.
Length = 160
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 229 RLKIAVPHRKPDKAARKFYIRKLEDSNCREKFSLSLKNSFELLKEIEDEQM 279
RLK+++ +K +K + FY D + R K+ S+K+ E+ ++ M
Sbjct: 60 RLKLSMAFKKAEKCHKNFYELNFIDKDERNKYIESVKDMKICFSEVNEDTM 110
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/87 (18%), Positives = 40/87 (45%)
Query: 317 SSMRLVIRKLARRDQRNAIDELADRAKLAAKRQDMKELYDVTKRIINKKHHPRKKPLKDC 376
+++R + R ++ + +AD L K Q + E Y++ K ++K + + +++
Sbjct: 278 NAIREDVTSTVDRVEKKYNNSVADMNSLPDKSQQLNEQYEIAKYRVDKHYEELRNSIEEA 337
Query: 377 SGQLLCTTEEQLVRWTEHFTKLLSKCQ 403
+ + EE +R + ++ K Q
Sbjct: 338 YQKSVNDLEEARIRQESNIDEMYRKSQ 364
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,608,755
Number of Sequences: 27539
Number of extensions: 962644
Number of successful extensions: 2381
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2355
Number of HSP's gapped (non-prelim): 27
length of query: 927
length of database: 12,573,161
effective HSP length: 88
effective length of query: 839
effective length of database: 10,149,729
effective search space: 8515622631
effective search space used: 8515622631
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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