Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002630-TA|BGIBMGA002630-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(143 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046170-1|AAH46170.1| 343|Homo sapiens HP1BP3 protein protein. 31 1.9
AL663074-4|CAI23389.1| 553|Homo sapiens heterochromatin protein... 31 1.9
AL663074-3|CAI23388.1| 515|Homo sapiens heterochromatin protein... 31 1.9
AL606477-6|CAI12533.1| 553|Homo sapiens heterochromatin protein... 31 1.9
AL606477-4|CAI12531.1| 327|Homo sapiens heterochromatin protein... 31 1.9
AL606477-3|CAI12530.1| 515|Homo sapiens heterochromatin protein... 31 1.9
AL606477-2|CAI12529.1| 278|Homo sapiens heterochromatin protein... 31 1.9
AF113534-1|AAF14871.1| 554|Homo sapiens HP1-BP74 protein protein. 31 1.9
AF212162-1|AAF23015.2| 2096|Homo sapiens ninein protein. 30 2.5
>BC046170-1|AAH46170.1| 343|Homo sapiens HP1BP3 protein protein.
Length = 343
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 137 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 178
>AL663074-4|CAI23389.1| 553|Homo sapiens heterochromatin protein 1,
binding protein 3 protein.
Length = 553
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 138 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 179
>AL663074-3|CAI23388.1| 515|Homo sapiens heterochromatin protein 1,
binding protein 3 protein.
Length = 515
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 100 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 141
>AL606477-6|CAI12533.1| 553|Homo sapiens heterochromatin protein 1,
binding protein 3 protein.
Length = 553
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 138 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 179
>AL606477-4|CAI12531.1| 327|Homo sapiens heterochromatin protein 1,
binding protein 3 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 138 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 179
>AL606477-3|CAI12530.1| 515|Homo sapiens heterochromatin protein 1,
binding protein 3 protein.
Length = 515
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 100 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 141
>AL606477-2|CAI12529.1| 278|Homo sapiens heterochromatin protein 1,
binding protein 3 protein.
Length = 278
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 100 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 141
>AF113534-1|AAF14871.1| 554|Homo sapiens HP1-BP74 protein protein.
Length = 554
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 TLGASQLCAALYTQKVAVSFPKDKT-TIVVEAMKSCIAKTGAN 52
TL ASQL A Q S P+ K I+ EA+K+C K+GA+
Sbjct: 138 TLSASQLARA-QKQTPMASSPRPKMDAILTEAIKACFQKSGAS 179
>AF212162-1|AAF23015.2| 2096|Homo sapiens ninein protein.
Length = 2096
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 52 NPNVIEVISSGKVSEDEKFKEFFYCACNDIGVVNPDGHIKVKECIEL-----FPKETQPL 106
NP+ + SG + +E C D+G+ DGH+ K+ + + +
Sbjct: 171 NPDDLNASQSGSFPPQDWIEEKLQEVCEDLGITR-DGHLNRKKLVSICEQYGLQNVDGEM 229
Query: 107 VEPVIKNCDKEGVNKYDTLF 126
+E V N D +G + F
Sbjct: 230 LEEVFHNLDPDGTMSVEDFF 249
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,150,170
Number of Sequences: 224733
Number of extensions: 754305
Number of successful extensions: 1614
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1606
Number of HSP's gapped (non-prelim): 9
length of query: 143
length of database: 73,234,838
effective HSP length: 83
effective length of query: 60
effective length of database: 54,581,999
effective search space: 3274919940
effective search space used: 3274919940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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