GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002629-TA|BGIBMGA002629-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
         (142 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY369208-1|AAQ73312.1|  956|Homo sapiens MAM domain-containing g...    29   7.6  
AY358125-1|AAQ88492.1|  937|Homo sapiens MAM-domain protein prot...    29   7.6  

>AY369208-1|AAQ73312.1|  956|Homo sapiens MAM domain-containing
           glycosylphosphatidylinositol anchor 2 protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 45  CLNENGLGEDAIEVIRAGEYREDEP 69
           C  ENGLG  AI+ IR   Y  D+P
Sbjct: 110 CKAENGLGSPAIKSIRVDVYYLDDP 134


>AY358125-1|AAQ88492.1|  937|Homo sapiens MAM-domain protein
           protein.
          Length = 937

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 45  CLNENGLGEDAIEVIRAGEYREDEP 69
           C  ENGLG  AI+ IR   Y  D+P
Sbjct: 91  CKAENGLGSPAIKSIRVDVYYLDDP 115


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.135    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,855,108
Number of Sequences: 224733
Number of extensions: 599543
Number of successful extensions: 1118
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1116
Number of HSP's gapped (non-prelim): 2
length of query: 142
length of database: 73,234,838
effective HSP length: 83
effective length of query: 59
effective length of database: 54,581,999
effective search space: 3220337941
effective search space used: 3220337941
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)