Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002628-TA|BGIBMGA002628-PA|undefined
(74 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 31 0.024
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 0.70
SPCC24B10.05 |tim9||Tim9-Tim10 complex subunit Tim9|Schizosaccha... 25 1.6
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 24 2.1
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 24 2.1
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 24 2.8
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 24 2.8
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 24 2.8
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 23 3.7
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 23 4.9
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 23 6.5
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 23 6.5
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 22 8.6
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 22 8.6
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 30.7 bits (66), Expect = 0.024
Identities = 10/45 (22%), Positives = 27/45 (60%)
Query: 1 MLSMVHTDNKIYSRYAMADGDANFRNMMEELFPDYPQIITSLLDC 45
++S++H K++ + GD + ++E F ++ + +++L+DC
Sbjct: 346 LVSLIHNSPKMFDETMLFAGDPSISTALKEDFREHFKTVSALMDC 390
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 0.70
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 25 RNMMEELFPDYPQIITSLLDCYRES 49
++ +E+LF + I++S+L CY S
Sbjct: 397 KSQLEDLFSPFGSILSSMLACYPNS 421
>SPCC24B10.05 |tim9||Tim9-Tim10 complex subunit
Tim9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 84
Score = 24.6 bits (51), Expect = 1.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 49 SLHSVATTNTFAKCIQEKTQVKL 71
+++S T N F+ C+Q+ T KL
Sbjct: 26 NMYSTLTQNCFSDCVQDFTSSKL 48
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 24.2 bits (50), Expect = 2.1
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 12 YSRYAMADGDANFRNMMEELFPDYPQIITSLLDCYRESLHS 52
YS ++ D +A N + P+ P+ I + D Y HS
Sbjct: 66 YSEFSNEDDEAEIDNSFADSIPNEPE-IPDMQDEYSRDSHS 105
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 24.2 bits (50), Expect = 2.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 22 ANFRNMMEELFPDYPQIITSLLDCYRESLHSVATTNTFAKCIQEKTQVKL 71
A R + +E F ++ + +TS++ +RES+ TF +KT + L
Sbjct: 526 AKEREITKEKFRNFNEQVTSVVQVHRESVRFETGVATFLLQEVKKTVLPL 575
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 23.8 bits (49), Expect = 2.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 29 EELFPDYPQIITSLLDCYRESLHSV--ATTNTFAKCIQEKTQV 69
E + PD P I+ LL C S SV +T N ++E T +
Sbjct: 896 EIVIPDMPSILPLLLQCLSLSDISVKLSTLNVIHTSVKELTSL 938
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 23.8 bits (49), Expect = 2.8
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 2 LSMVHTDNKIYSRYAMADGDANFRNMMEELFPDYPQIITSLLDCYRES 49
L+ HT + YS ++AD R + + P P SL + + ++
Sbjct: 1855 LNFEHTYGRDYSSASLADKSKATRKVSALMSPGLPHAAPSLAEAFGQA 1902
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 23.8 bits (49), Expect = 2.8
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 8 DNKIYSRYAMADGDANFRNMMEELFPDYPQIITSLLDCYRESLHSVATTNTFAKCIQEKT 67
D K+ + A+ GD N ++ +E+F + L+D + L+ + K ++
Sbjct: 992 DIKMIKQDAILSGDVNLKHKAKEMFAHAELNVDELIDA--KLLYDCCQVSKREKAYKQLK 1049
Query: 68 QVKL 71
Q KL
Sbjct: 1050 QKKL 1053
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 23.4 bits (48), Expect = 3.7
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 42 LLDCYRESLHSVATTNTFAKCIQEKTQVKLLI 73
+LDCY+ +HSV K KL I
Sbjct: 47 VLDCYQAEIHSVYVNGDLTKFSYSDALKKLRI 78
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 23.0 bits (47), Expect = 4.9
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 9 NKIYSRYAMADGDANFRNMMEELFPDYPQIITSLLDCYRESL----HSVA 54
+ + S+ D D N EE F Y + L C + SL HS+A
Sbjct: 18 HSVSSKLPKVDFDTNNEEFFEEEFEIYDPFYRAELPCPKPSLSISKHSIA 67
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 22.6 bits (46), Expect = 6.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 22 ANFRNMMEELFPDYPQIITSLL 43
+N+ + E+LF DYPQ S L
Sbjct: 179 SNYWSNEEKLFEDYPQYYMSPL 200
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 22.6 bits (46), Expect = 6.5
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 22 ANFRNMMEELFPDYPQIITSLLDCYRE 48
+N R +++ ++ +P+ IT+ +D +E
Sbjct: 594 SNLRGVLQLVYETFPKFITNAVDTRQE 620
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 15 YAMADGDANFRNMMEELFPDYPQIITS 41
Y+ +G +N RN+ E L P +TS
Sbjct: 476 YSTLNGGSNLRNINENLAALNPGYVTS 502
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 33 PDYPQIITSLLDCYRESLHSV 53
PDYP I L +RE L +V
Sbjct: 137 PDYPTIEELSLSLFREKLMAV 157
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,606
Number of Sequences: 5004
Number of extensions: 11575
Number of successful extensions: 47
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 14
length of query: 74
length of database: 2,362,478
effective HSP length: 54
effective length of query: 20
effective length of database: 2,092,262
effective search space: 41845240
effective search space used: 41845240
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 45 (22.2 bits)
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