GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002628-TA|BGIBMGA002628-PA|undefined
         (74 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   0.36 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   0.83 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   1.9  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    21   5.9  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    21   5.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   5.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    20   7.7  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 31  LFPDYPQIITSLLDCYRESLHSVATTNTFAKCI 63
           LFP + +   S++  YR    + AT  TF  CI
Sbjct: 531 LFPVHKKGCRSIVSNYRGITQTCATAKTFELCI 563


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 0.83
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   NKIYSRYAMADGDANFRNMMEELFPDYPQIITSLLD 44
           NK+ S   +       ++++E LFP +P I T   D
Sbjct: 354 NKVKSSEPVEQCPVKLKSIIETLFPTHPTINTPETD 389


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 24  FRNMMEELFPDYPQII 39
           FR ++ ELFP +P  +
Sbjct: 367 FREVVSELFPTHPNTV 382


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 13  SRYAMADGDANFRNMMEELFPDY 35
           S+ A   G+ NF + + + F DY
Sbjct: 369 SKPACRTGECNFGSFVADAFVDY 391


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 13  SRYAMADGDANFRNMMEELFPDY 35
           S+ A   G+ NF + + + F DY
Sbjct: 369 SKPACRTGECNFGSFVADAFVDY 391


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 4    MVHTDNKIYSRYAMADGDANFRNMMEE 30
            +  TDN++  R A    D N  N  +E
Sbjct: 1483 LAKTDNRLEEREAQIRKDLNLTNEAKE 1509


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 27  MMEELFPDYPQIITSLLDCYRESLHSVATTNTFAKCIQEKTQVKL 71
           ++E+    YP   + + D Y +   S A +   AK + E+T+  L
Sbjct: 848 VLEDNKEKYPLAASRINDFYVDDFISGADSENEAKQLCEETKAAL 892


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,720
Number of Sequences: 2123
Number of extensions: 2488
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 74
length of database: 516,269
effective HSP length: 51
effective length of query: 23
effective length of database: 407,996
effective search space:  9383908
effective search space used:  9383908
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)