GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002628-TA|BGIBMGA002628-PA|undefined
         (74 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    20   3.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    20   3.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    20   3.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   4.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   8.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   8.5  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
          protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 48 ESLHSVATTNTFAKCIQEK 66
          E LHS    N + KC+ ++
Sbjct: 36 EILHSDRLLNNYFKCLMDE 54


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
          protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 48 ESLHSVATTNTFAKCIQEK 66
          E LHS    N + KC+ ++
Sbjct: 36 EILHSDRLLNNYFKCLMDE 54


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
          protein 3c precursor protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 48 ESLHSVATTNTFAKCIQEK 66
          E LHS    N + KC+ ++
Sbjct: 36 EILHSDRLLNNYFKCLMDE 54


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 7   TDNKIYSRYAMADGDANFRNMMEELFPDY 35
           TD++ Y RY   + + N+    +E   D+
Sbjct: 171 TDSRHYDRYKEEESNENYNWEHKETHIDW 199


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 5/12 (41%), Positives = 10/12 (83%)

Query: 59 FAKCIQEKTQVK 70
          +A+CIQE+  ++
Sbjct: 6  YARCIQERRHIR 17


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 33  PDYPQIITSLLDCYRESLHSVAT 55
           PD       LL  Y E LH++ +
Sbjct: 391 PDVKAYGAGLLSAYGELLHALTS 413


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 52  SVATTNTFAKCIQEKTQVKL 71
           + ATT T  + I+E+ ++ L
Sbjct: 300 AAATTTTVYQFIEERQRISL 319


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,604
Number of Sequences: 429
Number of extensions: 584
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 74
length of database: 140,377
effective HSP length: 46
effective length of query: 28
effective length of database: 120,643
effective search space:  3378004
effective search space used:  3378004
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.7 bits)
S2: 36 (18.6 bits)