Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002627-TA|BGIBMGA002627-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(137 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604 27 4.0
11_02_0125 + 8572035-8572112,8573603-8574016,8574171-8574428,857... 27 4.0
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 4.0
04_04_1299 + 32450998-32451134,32451575-32452304,32452856-324530... 27 4.0
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 27 5.3
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 26 9.3
>11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604
Length = 259
Score = 27.5 bits (58), Expect = 4.0
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 13 VFNCGADNVHLNEDEREKANWYTAECGVETGVST-EVI-NAAKIGKYSKDKAFKKFVLCF 70
V+N G+ +N +E + G G++ E + NAAK Y + K K ++C
Sbjct: 39 VYNDGSGEDKINLEEMLRHAEPEVPMGSVRGLNNFEALQNAAKEVMYDESKGCNKKIVCE 98
Query: 71 FKKSAILNSDGTLNMVVALAKLPSGVNKSE 100
F K S GT + K P K +
Sbjct: 99 FGKVTKKPSKGTKRKKLEKTKKPKDSKKPD 128
>11_02_0125 +
8572035-8572112,8573603-8574016,8574171-8574428,
8574781-8574966
Length = 311
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 67 VLCFFKKSAILNSDGTLNMVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAADKAFAILQC 126
++ K+A+ NS T+ + + L LPS QS LEQCK Q+ A + Q
Sbjct: 74 IMAISNKNAMNNS--TMEVQIFLNDLPSNDFNHIFQS-LEQCKQSIAQECASRGLQPPQY 130
Query: 127 FHKG 130
+ G
Sbjct: 131 YVAG 134
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 78 NSDGTLNMVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAADKA 120
+S+ T +V ++ P S A+ E K TGQ AD+A
Sbjct: 3813 SSEATPGVVAGISATPGDNQPSPARESAEVAKEGTGQQKADQA 3855
>04_04_1299 + 32450998-32451134,32451575-32452304,32452856-32453053,
32453398-32454065,32454555-32454978,32455917-32456009,
32456101-32456295,32456378-32456470,32456718-32456930,
32457015-32457104,32457239-32457400
Length = 1000
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2 KSVVLICLAFAVFNCGADNVHLNEDEREKANWYTAE 37
KS+V+ C++ + NV L D + NWY A+
Sbjct: 965 KSIVVECMSKPFYGTNILNVELAVDAKCAQNWYAAK 1000
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 27.1 bits (57), Expect = 5.3
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 65 KFVLCFFKKSAILNSDGTLNMVVALAKLPSGVNKSEAQSVLEQCK--NKTGQDAADKAFA 122
+F L F A+L+ N +A++K+ SG+ + +S L QC T Q A + A
Sbjct: 189 RFALVQFHGLALLHQIRQ-NDRLAISKMVSGLTRGSVRSPLAQCLLIRYTSQVAMTRPLA 247
Query: 123 ILQC 126
+ C
Sbjct: 248 VTNC 251
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 84 NMVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAADKAFAILQCFH 128
N VVA A L SG++ +A + + + Q+A FA++Q FH
Sbjct: 153 NPVVASAALVSGIHLLQANPEIVKRWSNEVQEAVQSRFALVQ-FH 196
>03_05_0725 +
27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 97 NKSEAQSVLEQCKNKTGQDAADKAFAILQCF 127
N S+A++ ++QC N GQD +I+ F
Sbjct: 694 NASKAKAFVDQCDNPDGQDGFSSLVSIVGDF 724
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,415,309
Number of Sequences: 37544
Number of extensions: 112393
Number of successful extensions: 270
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 265
Number of HSP's gapped (non-prelim): 7
length of query: 137
length of database: 14,793,348
effective HSP length: 75
effective length of query: 62
effective length of database: 11,977,548
effective search space: 742607976
effective search space used: 742607976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -