Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002627-TA|BGIBMGA002627-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(137 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 2.1
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 2.1
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 28 2.7
U61954-5|AAK29811.2| 459|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 27 4.8
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 27 4.8
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 26 8.3
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 26 8.3
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 26 8.3
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 26 8.3
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 26 8.3
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 36 AECGVETGVSTEVINAAKIGKYSKDKAFKKFVLCFFKKSAILNS--DGTLNMVVALAKLP 93
+E +E + + ++G+ + D+A F FFK+S + DG V A+A +
Sbjct: 1313 SERTIEENILRKATQKRRLGELAIDEA--GFTPEFFKQSDSIRDLFDGENVEVTAVADVA 1370
Query: 94 SGVNKSEAQSVLEQCKNKTGQDAADKAFA 122
+ +++ E + + +C+++ +AA A A
Sbjct: 1371 TTMSEKEMEVAMAKCEDEADVNAAKIAVA 1399
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 36 AECGVETGVSTEVINAAKIGKYSKDKAFKKFVLCFFKKSAILNS--DGTLNMVVALAKLP 93
+E +E + + ++G+ + D+A F FFK+S + DG V A+A +
Sbjct: 1313 SERTIEENILRKATQKRRLGELAIDEA--GFTPEFFKQSDSIRDLFDGENVEVTAVADVA 1370
Query: 94 SGVNKSEAQSVLEQCKNKTGQDAADKAFA 122
+ +++ E + + +C+++ +AA A A
Sbjct: 1371 TTMSEKEMEVAMAKCEDEADVNAAKIAVA 1399
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 92 LPSGVNKSEAQSVLEQCKNKTGQDAADKAFAILQCFHKGTKTHIL 136
+PS S S L+ KN +AA+K L+ H+ T IL
Sbjct: 291 VPSAAKSSTVNSALQLFKNIDRNNAAEKINVALKTLHQNRITQIL 335
>U61954-5|AAK29811.2| 459|Caenorhabditis elegans Hypothetical
protein F41H10.11 protein.
Length = 459
Score = 27.5 bits (58), Expect = 3.6
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 26 DEREKANWYTAECGVETGVSTEVINAAKIGKYSKDKAFKKFVLCFFKKSAILNSDGTLNM 85
D +A++ ++ +E V + NA I ++ + F+ F+L F K +N+D
Sbjct: 13 DTGSEASYKVSQVEIED-VEENLKNADVIFEHLEQLPFQVFILSEFGKPIFVNNDRNEGE 71
Query: 86 VVALAKLPSGVNKSEAQSVLEQCKNKTGQD 115
+V+L L S QS + T QD
Sbjct: 72 IVSLVALICAF-VSRCQSWGDSLMTMTSQD 100
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 27.1 bits (57), Expect = 4.8
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 27 EREKANW-YTAECGVETGVSTEVINAAKIGKYSKDKAF-KKFVLCFFKKSAILNSDGTLN 84
+R+ W +C E G +V +++ K K K+ + KK++I D
Sbjct: 575 DRDSEAWDVIRKCLDEDGKEKKVAGSSRKNIRKKKKRMTKQQITDILKKASI---DDVEQ 631
Query: 85 MVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAADKA 120
AL ++ + KS +Q + KNK QDA+ +A
Sbjct: 632 HYKALQQIMDDIVKSLSQKDPNRDKNKASQDASKEA 667
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 27.1 bits (57), Expect = 4.8
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 40 VETGVSTEVINAAKIGKYSKDKAFKKFVLCFFKKS--AILNSDGTLNMVVALAKLPSGVN 97
+ V +E +N +KI YS AF + K ++LNS VAL +N
Sbjct: 657 IMNNVDSEAVNTSKISTYS---AFNLSINQSISKRRRSLLNSARESPRRVALENSIMSMN 713
Query: 98 KSEAQSVLEQCKNKTGQDAAD 118
+++ E +NKT Q + D
Sbjct: 714 GQTMEALTEYRQNKTMQTSQD 734
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 80 DGTLNMVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAADKA 120
DG + V + KL G NK + +S Q K KT AA KA
Sbjct: 13 DGRVTRSVTVRKLGPGANKEKQESDNSQ-KKKTVNAAAQKA 52
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 90 AKLPSGVNKSEAQSVLEQCKNKTGQDAADKAFAILQ 125
AKL + KSEA+ V E+ K++ Q DK A L+
Sbjct: 876 AKLRADQEKSEARKVAEKKKDEQNQKEKDKLQAKLR 911
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 105 LEQCKNKTGQDAADKAFAILQCFHKG 130
LE+ KN+ G+ + K QCF++G
Sbjct: 8 LEELKNEQGEQGSYKCHLCGQCFYRG 33
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 105 LEQCKNKTGQDAADKAFAILQCFHKG 130
LE+ KN+ G+ + K QCF++G
Sbjct: 8 LEELKNEQGEQGSYKCHLCGQCFYRG 33
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 64 KKFVLCFFKKSAILNSDGTLNMVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAA 117
+ F++C +K I +S L + + + + G + + V + +NK G DA+
Sbjct: 324 RHFIVCEYKNPGIWHSSEILKISLKILRQCMGHATLDLKEVNVKSENKIGSDAS 377
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 57 YSKDKAFKKFVLCFFKKSAILNS 79
Y+KD F K + FFKK+ ++ S
Sbjct: 124 YTKDFDFYKMIAYFFKKTVVMKS 146
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,116,330
Number of Sequences: 27539
Number of extensions: 109955
Number of successful extensions: 304
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 297
Number of HSP's gapped (non-prelim): 13
length of query: 137
length of database: 12,573,161
effective HSP length: 74
effective length of query: 63
effective length of database: 10,535,275
effective search space: 663722325
effective search space used: 663722325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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