Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002626-TA|BGIBMGA002626-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(137 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604 33 0.081
11_02_0125 + 8572035-8572112,8573603-8574016,8574171-8574428,857... 32 0.19
03_01_0335 - 2649566-2649570,2649713-2650787 29 1.3
12_02_1194 - 26903802-26904127,26904209-26905091,26905131-269054... 27 4.0
02_04_0258 + 21339682-21339806,21340635-21340730,21340905-213409... 27 4.0
06_01_0083 - 659510-661267,661577-662384,662700-663646 27 5.3
11_06_0676 + 26152192-26152367,26152669-26152708,26152857-261529... 26 9.3
09_03_0213 + 13515621-13515848 26 9.3
>11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604
Length = 259
Score = 33.1 bits (72), Expect = 0.081
Identities = 22/84 (26%), Positives = 32/84 (38%)
Query: 17 GADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAI 76
G D ++L E + + V+ + NAAK Y E K K ++C F K
Sbjct: 45 GEDKINLEEMLRHAEPEVPMGSVRGLNNFEALQNAAKEVMYDESKGCNKKIVCEFGKVTK 104
Query: 77 LNSDGTLNMDVALAKLPPGVNKSE 100
S GT + K P K +
Sbjct: 105 KPSKGTKRKKLEKTKKPKDSKKPD 128
>11_02_0125 +
8572035-8572112,8573603-8574016,8574171-8574428,
8574781-8574966
Length = 311
Score = 31.9 bits (69), Expect = 0.19
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 67 VLCFFNKSAILNSDGTLNMDVALAKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIFQC 126
++ NK+A+ NS T+ + + L LP QS LEQCK Q+ A + + Q
Sbjct: 74 IMAISNKNAMNNS--TMEVQIFLNDLPSNDFNHIFQS-LEQCKQSIAQECASRGLQPPQY 130
Query: 127 YYKG 130
Y G
Sbjct: 131 YVAG 134
>03_01_0335 - 2649566-2649570,2649713-2650787
Length = 359
Score = 29.1 bits (62), Expect = 1.3
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 25 ETQKEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILNSDGTLN 84
E + EK K+ +SG S V N ++ Y ED+ + V N + +SD +
Sbjct: 251 EGENEKTKKTQEGMADKSGTSQRVENDSEEVIYDEDEPRVQLVGSEENMESQESSDFAVA 310
Query: 85 MDVALAKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFE 122
+ V L++ + + + + L + +K + AD A E
Sbjct: 311 VGVVLSQTDEDMTEEKKKKSL-RLMEKEDKKVADAAAE 347
>12_02_1194 -
26903802-26904127,26904209-26905091,26905131-26905427,
26905638-26905709
Length = 525
Score = 27.5 bits (58), Expect = 4.0
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 25 ETQKEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILNSDGTLN 84
E + EK K+ +SG S V N ++ Y ED+ + V N + +SD
Sbjct: 310 EEENEKTKKTQEGMADKSGTSQRVENDSEEVIYDEDEPRVQLVGSEENMESQESSDFAAA 369
Query: 85 MDVALAKLPPGVNKSEAQSVLE--QCKDKTGQDAADKAFEIFQCY 127
+ V L++ + + + + L + +DK DAA + E +
Sbjct: 370 VRVVLSQTNEHMTEEKRKKSLRLLEKEDKKVADAAAERKEALNAF 414
>02_04_0258 +
21339682-21339806,21340635-21340730,21340905-21340980,
21341085-21341143,21341280-21341380,21341447-21341773,
21341861-21342021,21342100-21342303,21342735-21342966,
21343629-21344239
Length = 663
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 17 GADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQYS 58
G+ N H +Q KA Q ++ E+ ST N + G+Y+
Sbjct: 436 GSSNTHKQLSQPAKAGQTSTGTTSEADGSTSAYNGNQAGRYA 477
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 27.1 bits (57), Expect = 5.3
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Query: 39 VKESGVSTEVINAAKTGQYSEDKA-FKKFVLCFFNKSAILNSDGTLNMDVALAKLPPGVN 97
VK S V++E A + + +++ +F F N + ++NS PGV
Sbjct: 763 VKTSTVASEERQALRMADFDDEEMNMSQFPKKFGNSNFLINSIPIAEFQGRPLADHPGVK 822
Query: 98 KSEAQSVLEQCKDKTGQDAADKAFEIFQCYYK 129
L +D +A + C+Y+
Sbjct: 823 NGRPPGALTVPRDLLDASTVAEAISVISCWYE 854
>11_06_0676 +
26152192-26152367,26152669-26152708,26152857-26152966,
26153886-26153934,26154157-26154206,26154606-26155150,
26155583-26155743,26156231-26156440,26156525-26156690,
26156765-26156869,26157465-26157760
Length = 635
Score = 26.2 bits (55), Expect = 9.3
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 20 NVHLTETQKEKAKQ----YTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSA 75
N H + + KA Q T E +E + V + A+ GQ E + K F K
Sbjct: 134 NHHANQQYRSKANQESAAITEEVNQEQTAARFVASEAQEGQRVELRFLNKLNPLVFTKEK 193
Query: 76 ILNSDGT 82
I DGT
Sbjct: 194 ITAEDGT 200
>09_03_0213 + 13515621-13515848
Length = 75
Score = 26.2 bits (55), Expect = 9.3
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 100 EAQSVLEQCKDKTGQDAADKAFEIFQC--YYKGTKT 133
+AQ+ ++ KDK GQ AA+ +F+ C +YKG+ T
Sbjct: 9 KAQAASDR-KDKAGQKAAEDSFQC-SCGRFYKGSTT 42
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.130 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,441,895
Number of Sequences: 37544
Number of extensions: 111776
Number of successful extensions: 301
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 298
Number of HSP's gapped (non-prelim): 9
length of query: 137
length of database: 14,793,348
effective HSP length: 75
effective length of query: 62
effective length of database: 11,977,548
effective search space: 742607976
effective search space used: 742607976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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