Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002624-TA|BGIBMGA002624-PA|undefined
(1052 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041583-1|AAH41583.1| 249|Homo sapiens RUN domain containing 2... 37 0.43
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 36 1.0
AK022425-1|BAB14033.1| 375|Homo sapiens protein ( Homo sapiens ... 36 1.0
AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium ch... 35 1.8
M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subu... 34 2.3
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 34 3.1
BC009449-1|AAH09449.1| 569|Homo sapiens MGC2641 protein protein. 33 4.0
BC000755-1|AAH00755.1| 670|Homo sapiens hepatoma-derived growth... 33 4.0
AY358600-1|AAQ88963.1| 671|Homo sapiens HGDF-related pro 2 prot... 33 4.0
AF294267-1|AAP97281.1| 671|Homo sapiens hepatoma-derived growth... 33 4.0
AB208892-1|BAD92129.1| 472|Homo sapiens hepatoma-derived growth... 33 4.0
AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium ch... 33 5.3
BC119679-1|AAI19680.1| 311|Homo sapiens TBN protein protein. 33 7.1
BC119678-1|AAI19679.1| 311|Homo sapiens TBN protein protein. 33 7.1
BC039582-1|AAH39582.1| 593|Homo sapiens DNAI2 protein protein. 33 7.1
BC038586-1|AAH38586.1| 529|Homo sapiens zinc finger protein 490... 33 7.1
BC031482-1|AAH31482.1| 989|Homo sapiens Unknown (protein for IM... 33 7.1
BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open read... 33 7.1
AL513008-2|CAI15203.1| 311|Homo sapiens protein ( Human DNA seq... 33 7.1
AL512274-2|CAI16782.1| 311|Homo sapiens protein ( Human DNA seq... 33 7.1
AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open read... 33 7.1
AL137526-1|CAB70790.1| 289|Homo sapiens hypothetical protein pr... 33 7.1
AK023084-1|BAB14396.1| 914|Homo sapiens protein ( Homo sapiens ... 33 7.1
AJ295276-1|CAC17464.1| 605|Homo sapiens intermediate dynein cha... 33 7.1
AF465841-1|AAP47094.1| 310|Homo sapiens TBP-associated factor T... 33 7.1
AF253097-1|AAG38000.1| 605|Homo sapiens dynein axonemal interme... 33 7.1
AF250288-1|AAG38489.1| 605|Homo sapiens dynein axonemal interme... 33 7.1
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 33 7.1
AB033024-1|BAA86512.1| 553|Homo sapiens KIAA1198 protein protein. 33 7.1
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage... 32 9.3
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ... 32 9.3
AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium ch... 32 9.3
AL139344-4|CAI19846.1| 539|Homo sapiens regulator of G-protein ... 32 9.3
AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel ... 32 9.3
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch... 32 9.3
>BC041583-1|AAH41583.1| 249|Homo sapiens RUN domain containing 2B
protein.
Length = 249
Score = 36.7 bits (81), Expect = 0.43
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 10/194 (5%)
Query: 307 KYEPVAIIDQKAEPTMKITTPNSVTEFIQDPSLEMSLAHITGQLSSMQVTPLQPNNEKES 366
K+ P + D E T +T T+ + E++ + S+ + P Q +
Sbjct: 35 KFAPT-VSDLLKESTQNVTLLKESTQGVSSVFREITASSAI----SILIKPEQETDPLPV 89
Query: 367 NIPKIESDMKYEKVETLTPKTPSSVAFDVTSGEAVSDDMIQIVQSLDSSSEEIS--PTKE 424
+ +D K +K + + ++FD E S DM + SSE+ S +
Sbjct: 90 VSRNVSADAKCKKERKKKKQVTNIISFDDEEDEQNSGDMFKKTPGAGESSEDNSDHSSVN 149
Query: 425 SITADESRGHFYNFGSHYEGLTLPKKKNRNPQFALEDLDV--LDLTEIGENIGDQFGIFG 482
++A ES + GS + N +F + LDV +D ++ EN D +G
Sbjct: 150 IMSAFESPFGPNSNGSQSSNSWKIDSLSLNREFGYQKLDVKSIDDEDVDENEDDVYGNSS 209
Query: 483 GRK-RQNKLKPNKH 495
GRK R + P K+
Sbjct: 210 GRKHRGHSESPEKN 223
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type
V alpha subunit protein.
Length = 2016
Score = 35.5 bits (78), Expect = 1.0
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 335 QDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSV 391
Q P +LA GQL S TP P + +P + ++E+ E TP P V
Sbjct: 987 QRPQKPAALA-AQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPV 1045
Query: 392 AFDVTSGEAVSDDMIQIVQSLDSSSEEISPTKES 425
+ E+ +DD + ++ + EE S +ES
Sbjct: 1046 CVPIAVAESDTDDQEEDEENSLGTEEESSKQQES 1079
>AK022425-1|BAB14033.1| 375|Homo sapiens protein ( Homo sapiens
cDNA FLJ12363 fis, clone MAMMA1002380. ).
Length = 375
Score = 35.5 bits (78), Expect = 1.0
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 322 MKITTPNSVTEFIQDPSLEMS--LAHITGQLS-SMQVTPLQPNNEKESNIPKIESDMKYE 378
+K +T N VT +++ + +S IT + S+ + P Q + + +D K +
Sbjct: 196 LKESTQN-VTSLLKESTQGVSSLFREITASSAVSILIKPEQETDPLPVVSRNVSADAKCK 254
Query: 379 KVETLTPKTPSSVAFDVTSGEAVSDDMIQIVQSLDSSSEEIS--PTKESITADESRGHFY 436
K K + ++FD E S D+ + SSE+ S + ++A ES
Sbjct: 255 KERKKKKKVTNIISFDDEEDEQNSGDVFKKTPGAGESSEDNSDRSSVNIMSAFESPFGPN 314
Query: 437 NFGSHYEGLTLPKKKNRNPQFALEDLDV--LDLTEIGENIGDQFGIFGGRK-RQNKLKPN 493
+ GS + N +F + LDV +D ++ EN D +G GRK R + P
Sbjct: 315 SNGSQSSNSWKIDSLSLNGEFGYQKLDVKGIDDEDVDENEDDVYGNSSGRKHRGHSESPE 374
Query: 494 K 494
K
Sbjct: 375 K 375
>AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium channel
protein.
Length = 2016
Score = 34.7 bits (76), Expect = 1.8
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 348 GQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSVAFDVTSGEAVSDD 404
GQL S TP P + +P + ++E+ E TP P V + E+ +DD
Sbjct: 999 GQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPVCVPIAVAESDTDD 1058
Query: 405 MIQIVQSLDSSSEEISPTKES 425
+ ++ + EE S +ES
Sbjct: 1059 QEEDEENSLGTEEESSKQQES 1079
>M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subunit
protein.
Length = 2016
Score = 34.3 bits (75), Expect = 2.3
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 348 GQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSVAFDVTSGEAVSDD 404
GQL S TP P + +P + ++E+ E TP P V + E+ +DD
Sbjct: 999 GQLPSCIATPYSPPPPETEKVPPTRKETQFEEGEQPGQGTPGDPEPVCVPIAVAESDTDD 1058
Query: 405 MIQIVQSLDSSSEEISPTKES 425
+ ++ + EE S +ES
Sbjct: 1059 QEEDEENSLGTEEESSKQQES 1079
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 33.9 bits (74), Expect = 3.1
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 283 AIASDIPVVQTTENIAIISSINT--EKYEPVAIIDQKAEPTMKITTPNSVTEFIQDPSLE 340
A +DI + N +++++ T +E + + EP+ K+T+PN T ++D ++
Sbjct: 4818 AATTDIETTHPSIN-TVVTNVGTTGSAFESHSTVSAYPEPS-KVTSPNVTTSTMEDTTIS 4875
Query: 341 MSL--AHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKV--ETLTPKTPSSVAFDVT 396
S+ + T + + + L P + S +I S + V + LT T DVT
Sbjct: 4876 RSIPKSSKTTRTETETTSSLTPKLRETSISQEITSSTETSTVPYKELTGATTEVSRTDVT 4935
Query: 397 SGEAVS-DDMIQIVQSLDSSSE 417
S + S Q SLD S+E
Sbjct: 4936 SSSSTSFPGPDQSTVSLDISTE 4957
>BC009449-1|AAH09449.1| 569|Homo sapiens MGC2641 protein protein.
Length = 569
Score = 33.5 bits (73), Expect = 4.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 497 DGRDGDEYDEMFDVISLDAL--TRKSDTGDIEFDKDKEKDYNEIKFKIPKIVWKQAFDPT 554
DG D DE DE V+++ A+ T SD + + D DK D + +K K P + K +
Sbjct: 10 DGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPAL--KMSVSKR 67
Query: 555 PILRSPITIVLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSP 600
S + +++N+E + E++ ++ + +P
Sbjct: 68 ARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 113
>BC000755-1|AAH00755.1| 670|Homo sapiens hepatoma-derived growth
factor-related protein 2 protein.
Length = 670
Score = 33.5 bits (73), Expect = 4.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 497 DGRDGDEYDEMFDVISLDAL--TRKSDTGDIEFDKDKEKDYNEIKFKIPKIVWKQAFDPT 554
DG D DE DE V+++ A+ T SD + + D DK D + +K K P + K +
Sbjct: 112 DGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPAL--KMSVSKR 169
Query: 555 PILRSPITIVLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSP 600
S + +++N+E + E++ ++ + +P
Sbjct: 170 ARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 215
>AY358600-1|AAQ88963.1| 671|Homo sapiens HGDF-related pro 2
protein.
Length = 671
Score = 33.5 bits (73), Expect = 4.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 497 DGRDGDEYDEMFDVISLDAL--TRKSDTGDIEFDKDKEKDYNEIKFKIPKIVWKQAFDPT 554
DG D DE DE V+++ A+ T SD + + D DK D + +K K P + K +
Sbjct: 112 DGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPAL--KMSVSKR 169
Query: 555 PILRSPITIVLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSP 600
S + +++N+E + E++ ++ + +P
Sbjct: 170 ARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 215
>AF294267-1|AAP97281.1| 671|Homo sapiens hepatoma-derived growth
factor 2 protein.
Length = 671
Score = 33.5 bits (73), Expect = 4.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 497 DGRDGDEYDEMFDVISLDAL--TRKSDTGDIEFDKDKEKDYNEIKFKIPKIVWKQAFDPT 554
DG D DE DE V+++ A+ T SD + + D DK D + +K K P + K +
Sbjct: 112 DGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPAL--KMSVSKR 169
Query: 555 PILRSPITIVLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSP 600
S + +++N+E + E++ ++ + +P
Sbjct: 170 ARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 215
>AB208892-1|BAD92129.1| 472|Homo sapiens hepatoma-derived growth
factor-related protein 2 isoform 1 variant protein.
Length = 472
Score = 33.5 bits (73), Expect = 4.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 497 DGRDGDEYDEMFDVISLDAL--TRKSDTGDIEFDKDKEKDYNEIKFKIPKIVWKQAFDPT 554
DG D DE DE V+++ A+ T SD + + D DK D + +K K P + K +
Sbjct: 63 DGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPAL--KMSVSKR 120
Query: 555 PILRSPITIVLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSP 600
S + +++N+E + E++ ++ + +P
Sbjct: 121 ARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAP 166
>AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium channel
splicing variant protein.
Length = 1962
Score = 33.1 bits (72), Expect = 5.3
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 348 GQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSVAFDVTSGEAVSDD 404
GQL S TP P + +P + ++E+ E TP P V + E+ +DD
Sbjct: 999 GQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPVCVPIAVAESDTDD 1058
Query: 405 MIQIVQ-SLDSSSEEISPTKESITADESRGHFYN 437
+ + SL + E T E ++ S N
Sbjct: 1059 QEEDEENSLGTEEESSKQTPEDSCSEGSTADMTN 1092
>BC119679-1|AAI19680.1| 311|Homo sapiens TBN protein protein.
Length = 311
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 561 ITIVLP--IHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDTP 613
+T +LP + +QQ + + + + + DTEN+A+ ++ EDS A++ N +++ P
Sbjct: 224 LTALLPSELEMQQMEETDSSEQDEQTDTENLALHISM-EDSGAEKENTSVLQQNP 277
>BC119678-1|AAI19679.1| 311|Homo sapiens TBN protein protein.
Length = 311
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 561 ITIVLP--IHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDTP 613
+T +LP + +QQ + + + + + DTEN+A+ ++ EDS A++ N +++ P
Sbjct: 224 LTALLPSELEMQQMEETDSSEQDEQTDTENLALHISM-EDSGAEKENTSVLQQNP 277
>BC039582-1|AAH39582.1| 593|Homo sapiens DNAI2 protein protein.
Length = 593
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 480 IFGGRKRQNKLKPNKHRDGRDGDEYDEMFDVISLDALTRKSDTG--DIEFDKDKEKDYNE 537
I R R+ +LK +GRD ++ DE + L+AL K++ DI F + K+K+ +
Sbjct: 497 ILEARHREMRLKEKGKAEGRDEEQTDEEL-AVDLEALVSKAEEEFFDIIFTELKKKEADA 555
Query: 538 IK 539
IK
Sbjct: 556 IK 557
>BC038586-1|AAH38586.1| 529|Homo sapiens zinc finger protein 490
protein.
Length = 529
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 564 VLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDT-PVSISSLSPV 622
VL + + I +TD I E+VAV+ TL E + D + D + +L+ +
Sbjct: 37 VLQMQNSEHHGQSIKTQTDSISLEDVAVNFTLEEWALLDPGQRNIYRDVMRATFKNLACI 96
Query: 623 STVTQATDVEPEQEVVGQVIRFP 645
+ D+E E + G+ +R P
Sbjct: 97 GEKWKDQDIEDEHKNQGRNLRSP 119
>BC031482-1|AAH31482.1| 989|Homo sapiens Unknown (protein for
IMAGE:4508125) protein.
Length = 989
Score = 32.7 bits (71), Expect = 7.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 559 SPITIVLPIHV-QQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDT 612
SP+ + P+ + + +DN I+ E + DT+ + VD L E S NP E++
Sbjct: 234 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 288
>BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open reading
frame 12 protein.
Length = 1247
Score = 32.7 bits (71), Expect = 7.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 559 SPITIVLPIHV-QQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDT 612
SP+ + P+ + + +DN I+ E + DT+ + VD L E S NP E++
Sbjct: 400 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 454
>AL513008-2|CAI15203.1| 311|Homo sapiens protein ( Human DNA
sequence from clone RP11-533O20 on chromosome 6. ).
Length = 311
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 561 ITIVLP--IHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDTP 613
+T +LP + +QQ + + + + + DTEN+A+ ++ EDS A++ N +++ P
Sbjct: 224 LTALLPSELEMQQMEETDSSEQDEQTDTENLALHISM-EDSGAEKENTSVLQQNP 277
>AL512274-2|CAI16782.1| 311|Homo sapiens protein ( Human DNA
sequence from clone RP11-7K24 on chromosome 6. ).
Length = 311
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 561 ITIVLP--IHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDTP 613
+T +LP + +QQ + + + + + DTEN+A+ ++ EDS A++ N +++ P
Sbjct: 224 LTALLPSELEMQQMEETDSSEQDEQTDTENLALHISM-EDSGAEKENTSVLQQNP 277
>AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open reading
frame 12 protein.
Length = 1247
Score = 32.7 bits (71), Expect = 7.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 559 SPITIVLPIHV-QQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDT 612
SP+ + P+ + + +DN I+ E + DT+ + VD L E S NP E++
Sbjct: 400 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 454
>AL137526-1|CAB70790.1| 289|Homo sapiens hypothetical protein
protein.
Length = 289
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 480 IFGGRKRQNKLKPNKHRDGRDGDEYDEMFDVISLDALTRKSDTG--DIEFDKDKEKDYNE 537
I R R+ +LK +GRD ++ DE + L+AL K++ DI F + K+K+ +
Sbjct: 193 ILEARHREMRLKEKGKAEGRDEEQTDEEL-AVDLEALVSKAEEEFFDIIFTELKKKEADA 251
Query: 538 IK 539
IK
Sbjct: 252 IK 253
>AK023084-1|BAB14396.1| 914|Homo sapiens protein ( Homo sapiens
cDNA FLJ13022 fis, clone NT2RP3000753, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 914
Score = 32.7 bits (71), Expect = 7.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 559 SPITIVLPIHV-QQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDT 612
SP+ + P+ + + +DN I+ E + DT+ + VD L E S NP E++
Sbjct: 67 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 121
>AJ295276-1|CAC17464.1| 605|Homo sapiens intermediate dynein chain
protein.
Length = 605
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 480 IFGGRKRQNKLKPNKHRDGRDGDEYDEMFDVISLDALTRKSDTG--DIEFDKDKEKDYNE 537
I R R+ +LK +GRD ++ DE + L+AL K++ DI F + K+K+ +
Sbjct: 509 ILEARHREMRLKEKGKAEGRDEEQTDEEL-AVDLEALVSKAEEEFFDIIFTELKKKEADA 567
Query: 538 IK 539
IK
Sbjct: 568 IK 569
>AF465841-1|AAP47094.1| 310|Homo sapiens TBP-associated factor
TAFII43 protein.
Length = 310
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 561 ITIVLP--IHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDTP 613
+T +LP + +QQ + + + + + DTEN+A+ ++ EDS A++ N +++ P
Sbjct: 224 LTALLPSELEMQQMEETDSSEQDEQTDTENLALHISM-EDSGAEKENTSVLQQNP 277
>AF253097-1|AAG38000.1| 605|Homo sapiens dynein axonemal
intermediate chain protein.
Length = 605
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 480 IFGGRKRQNKLKPNKHRDGRDGDEYDEMFDVISLDALTRKSDTG--DIEFDKDKEKDYNE 537
I R R+ +LK +GRD ++ DE + L+AL K++ DI F + K+K+ +
Sbjct: 509 ILEARHREMRLKEKGKAEGRDEEQTDEEL-AVDLEALVSKAEEEFFDIIFTELKKKEADA 567
Query: 538 IK 539
IK
Sbjct: 568 IK 569
>AF250288-1|AAG38489.1| 605|Homo sapiens dynein axonemal
intermediate chain protein.
Length = 605
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 480 IFGGRKRQNKLKPNKHRDGRDGDEYDEMFDVISLDALTRKSDTG--DIEFDKDKEKDYNE 537
I R R+ +LK +GRD ++ DE + L+AL K++ DI F + K+K+ +
Sbjct: 509 ILEARHREMRLKEKGKAEGRDEEQTDEEL-AVDLEALVSKAEEEFFDIIFTELKKKEADA 567
Query: 538 IK 539
IK
Sbjct: 568 IK 569
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 32.7 bits (71), Expect = 7.1
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 317 KAEPTMKITTPNSVTEFIQDPSLEMSLA-HITGQLSSMQVTPLQPNNEKESNIPKIESDM 375
++ PT + T P S T + D + E++ + ITG LS+ T L P + S++P E+
Sbjct: 76 RSTPTSETTYPTSPTSIVSDSTTEITYSTSITGTLST--ATTLPPTS---SSLPTTET-A 129
Query: 376 KYEKVETLTPKTPSSVAFDVTSGEAVSDDMIQIVQSLDSSSEEISPT 422
TL TP++ + S S + V + ++ SPT
Sbjct: 130 TMTPTTTLITTTPNTTSHSTPS--FTSSTIYSTVSTSTTAISSASPT 174
>AB033024-1|BAA86512.1| 553|Homo sapiens KIAA1198 protein protein.
Length = 553
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 564 VLPIHVQQDDNNEIAGETDDIDTENVAVDSTLVEDSPADQNNPELVEDT-PVSISSLSPV 622
VL + + I +TD I E+VAV+ TL E + D + D + +L+ +
Sbjct: 61 VLQMQNSEHHGQSIKTQTDSISLEDVAVNFTLEEWALLDPGQRNIYRDVMRATFKNLACI 120
Query: 623 STVTQATDVEPEQEVVGQVIRFP 645
+ D+E E + G+ +R P
Sbjct: 121 GEKWKDQDIEDEHKNQGRNLRSP 143
>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
voltage-gated, type V, alpha (long QT syndrome 3)
protein.
Length = 2015
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 335 QDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSV 391
Q P +LA GQL S TP P + +P + ++E+ E TP P V
Sbjct: 987 QRPQKPAALA-AQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPV 1045
Query: 392 AFDVTSGEAVSDDMIQIVQSLDSSSEEIS 420
+ E+ +DD + ++ + EE S
Sbjct: 1046 CVPIAVAESDTDDQEEDEENSLGTEEESS 1074
>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel alpha
subunit Nav1.5 protein.
Length = 2015
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 335 QDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSV 391
Q P +LA GQL S TP P + +P + ++E+ E TP P V
Sbjct: 987 QRPQKPAALA-AQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPV 1045
Query: 392 AFDVTSGEAVSDDMIQIVQSLDSSSEEIS 420
+ E+ +DD + ++ + EE S
Sbjct: 1046 CVPIAVAESDTDDQEEDEENSLGTEEESS 1074
>AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium channel
type V alpha subunit jejunal variant protein.
Length = 2015
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 335 QDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSV 391
Q P +LA GQL S TP P + +P + ++E+ E TP P V
Sbjct: 987 QRPQKPAALA-AQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPV 1045
Query: 392 AFDVTSGEAVSDDMIQIVQSLDSSSEEIS 420
+ E+ +DD + ++ + EE S
Sbjct: 1046 CVPIAVAESDTDDQEEDEENSLGTEEESS 1074
>AL139344-4|CAI19846.1| 539|Homo sapiens regulator of G-protein
signalling like 2 protein.
Length = 539
Score = 32.3 bits (70), Expect = 9.3
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 353 MQVTPLQPNNEKESNIPKIESDMKYEKVETLTPKTPSSVAFDVTSGEAVSDDMIQIVQSL 412
+Q+ L+ + KE+ I +E DM Y K+ ++ K S + + VS + ++ +
Sbjct: 325 IQMPSLKMASSKETRISSLEKDMHYAKISSMENKAKSHLHMEAPFETKVSTHLRTVIPIV 384
Query: 413 DSSSE 417
+ SS+
Sbjct: 385 NHSSK 389
>AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel alpha
subunit protein.
Length = 2015
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 335 QDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSV 391
Q P +LA GQL S TP P + +P + ++E+ E TP P V
Sbjct: 987 QRPQKPAALA-AQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPV 1045
Query: 392 AFDVTSGEAVSDDMIQIVQSLDSSSEEIS 420
+ E+ +DD + ++ + EE S
Sbjct: 1046 CVPIAVAESDTDDQEEDEENSLGTEEESS 1074
>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium
channel type V alpha isoform b variant protein.
Length = 1576
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 335 QDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETL---TPKTPSSV 391
Q P +LA GQL S TP P + +P + ++E+ E TP P V
Sbjct: 566 QRPQKPAALA-AQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPV 624
Query: 392 AFDVTSGEAVSDDMIQIVQSLDSSSEEIS 420
+ E+ +DD + ++ + EE S
Sbjct: 625 CVPIAVAESDTDDQEEDEENSLGTEEESS 653
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,749,269
Number of Sequences: 224733
Number of extensions: 6008578
Number of successful extensions: 17593
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 17574
Number of HSP's gapped (non-prelim): 50
length of query: 1052
length of database: 73,234,838
effective HSP length: 98
effective length of query: 954
effective length of database: 51,211,004
effective search space: 48855297816
effective search space used: 48855297816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 70 (32.3 bits)
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