Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002623-TA|BGIBMGA002623-PA|IPR001547|Glycoside
hydrolase, family 5, IPR001734|Na+/solute symporter
(455 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 155 8e-38
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 154 1e-37
AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical ... 110 2e-24
U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z83221-6|CAB05703.3| 210|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical p... 29 6.8
Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical p... 29 6.8
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81139-5|CAB03481.2| 359|Caenorhabditis elegans Hypothetical pr... 29 9.0
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 155 bits (375), Expect = 8e-38
Identities = 95/307 (30%), Positives = 158/307 (51%), Gaps = 20/307 (6%)
Query: 95 VFSLFGAVAMSLILGSTFLPVFHELQI------------TSVYE--GGLKAVVWTDVLQT 140
+F LF V MS++L + + + LQI T++Y GGLKAVVWTD LQ
Sbjct: 138 LFLLFTIVYMSVVLYAPSVALSPVLQINKWYLVLIFGCTTTLYTCLGGLKAVVWTDSLQA 197
Query: 141 IVMVSAMILVIFK--STIIVGGINEVLRRNWSTDRLA-FPSLTFDLTERHSIWSVSIGAT 197
++M + + +I+K S VGG+ VL W + R++ + + + + +S+W T
Sbjct: 198 VIMYTGVFTLIYKGLSHPRVGGLERVLSIAWDSGRISELGRMDWRIDQYNSLWINLFSGT 257
Query: 198 FYWIGNIAVNQSMMQRFLALSELKSAKRAXXXXXXXXXXXXXXXXYSGLVAYAKYYECDP 257
W+ + VNQ +QR+ +L LK A+ + G +A A +Y C+P
Sbjct: 258 IVWLASFGVNQLAIQRYASLPSLKVAQSIIIYTLAPFTVLCSIVAFVGFIALAYFYNCNP 317
Query: 258 LDSXXXXXXXXXXXXXVMDVFNDWEGMPGIFIAGVFSAALSSLSTGLNSMAAVVLEDFWK 317
L++ D+ G+ G++++ + SA LS+LS+G+NSMAA + EDF K
Sbjct: 318 LETGEVKESDHITISFARDILQPTPGLFGLYVSCIMSATLSTLSSGMNSMAAAIYEDFLK 377
Query: 318 PFC--KVPTPKQSQIIVRLVVIILGCICFGLVFVVEKLGSVLQLTMSLSSASMGPLAGVF 375
K+ T + + +++V+I G GL F+ E LG L++ +S+ A GP+ +F
Sbjct: 378 NSLDGKI-TDTGATRLNKIIVLICGLSSTGLAFLAEVLGGSLRICISVMGAMSGPMVAIF 436
Query: 376 LMGLFFP 382
++ LFFP
Sbjct: 437 VLALFFP 443
Score = 72.5 bits (170), Expect = 6e-13
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 22 YVDYAVFIMMLTICGLIGIYFGFVNK-------QKSTQDYLMGGRNMKLVPVCFSLVASF 74
++DYA+F + + + G+Y ++ + + ++YLMGGR + +PV SL+ +F
Sbjct: 9 WLDYAIFGLSIGLSLSTGVYHAIKSRIILRRGDRTAKEEYLMGGRQLPPLPVALSLLTTF 68
Query: 75 ISGISLLGTPTELYLFGTAYVFSLFGAVAMSLILGSTFLPVFHELQITSVYE 126
+SGI +LG P E++ G + VA S++ FLPVFH+++ T ++E
Sbjct: 69 LSGILMLGVPAEMFQRGAQIWLNFVIGVASSIVTCFVFLPVFHKMKSTCLHE 120
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 154 bits (374), Expect = 1e-37
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 6/261 (2%)
Query: 127 GGLKAVVWTDVLQTIVMVSAMILVIFK--STIIVGGINEVLRRNWSTDRLA-FPSLTFDL 183
GGLKAVVWTD LQ ++M + + +I+K S VGG+ VL W + R++ + + +
Sbjct: 38 GGLKAVVWTDSLQAVIMYTGVFTLIYKGLSHPRVGGLERVLSIAWDSGRISELGRMDWRI 97
Query: 184 TERHSIWSVSIGATFYWIGNIAVNQSMMQRFLALSELKSAKRAXXXXXXXXXXXXXXXXY 243
+ +S+W T W+ + VNQ +QR+ +L LK A+ +
Sbjct: 98 DQYNSLWINLFSGTIVWLASFGVNQLAIQRYASLPSLKVAQSIIIYTLAPFTVLCSIVAF 157
Query: 244 SGLVAYAKYYECDPLDSXXXXXXXXXXXXXVMDVFNDWEGMPGIFIAGVFSAALSSLSTG 303
G +A A +Y C+PL++ D+ G+ G++++ + SA LS+LS+G
Sbjct: 158 VGFIALAYFYNCNPLETGEVKESDHITISFARDILQPTPGLFGLYVSCIMSATLSTLSSG 217
Query: 304 LNSMAAVVLEDFWKPFC--KVPTPKQSQIIVRLVVIILGCICFGLVFVVEKLGSVLQLTM 361
+NSMAA + EDF K K+ T + + +++V+I G GL F+ E LG L++ +
Sbjct: 218 MNSMAAAIYEDFLKNSLDGKI-TDTGATRLNKIIVLICGLSSTGLAFLAEVLGGSLRICI 276
Query: 362 SLSSASMGPLAGVFLMGLFFP 382
S+ A GP+ +F++ LFFP
Sbjct: 277 SVMGAMSGPMVAIFVLALFFP 297
>AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical
protein F52H2.4 protein.
Length = 446
Score = 110 bits (264), Expect = 2e-24
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 29/315 (9%)
Query: 98 LFGAVAM---SLILGS-TFLPVFHELQITSVYE------GGLKAVVWTDVLQTIVMVSAM 147
L+ +VA+ SL + S T +P+ + IT+V GG+KA + T +Q M
Sbjct: 58 LYNSVALYAPSLAIASITNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQ-------M 110
Query: 148 ILVIFKSTIIVG-GINEVLRRNWSTDRLAFPSLTFDLTERHSIWSVSIGATFYWIGNIAV 206
+L+ T I+ + E+ + T + + T RHS+WS+ IG T + A
Sbjct: 111 LLIFLTMTFIISISLREMSIHDVYTSVVHGKRFRINPTIRHSVWSLLIGGTGNILALFAA 170
Query: 207 NQSMMQRFLALSELKSAKRAXXXXXXXXXXXXXXXXYSGLVAYAKYYECDPLDSXXXXXX 266
NQ +QR++A+ LKSA++ G + YA Y +C P
Sbjct: 171 NQLSIQRYMAMDTLKSAQKVVLLNIVCNTIILVSYVSVGFLIYAHYKDCHP----QIGNA 226
Query: 267 XXXXXXXVMDVFNDWEGMPGIFIAGVFSAALSSLSTGLNSMAAVVLEDFWKPF---CKVP 323
VMDV + + G G+F A V+SA +S+LS +++++V+ D WK + K+
Sbjct: 227 NELLPRFVMDVTSKYPGSVGLFAAAVYSAGISTLSASFTAVSSIVINDVWKVYRERRKMA 286
Query: 324 TPKQSQI--IVRLVVIILGCICFGLVFVVEKLGS-VLQLTMSLSSASMGPLAGVFLMGLF 380
+ Q+ +R++ I+L I + F+ L S +LQ++ + A GP+ G F++GLF
Sbjct: 287 PLRNDQVQNAMRILPIVLSFISIFVAFLCSMLQSIILQVSFIVFGAGGGPVLGSFVVGLF 346
Query: 381 FPFIDSTVRWYVGLL 395
P + VGL+
Sbjct: 347 VPRVKEKAA-LVGLI 360
>U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical
protein F27D9.2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 2.9
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 22 YVDYAVFIMMLTICGLIGIYFGFVNK------QKSTQDYLMGGRNMKLV--PVCFSLVAS 73
Y A+F ++L + GL+ + FV K + QD G + +K + P +++
Sbjct: 212 YTSPALFCLILNVTGLLIVKLAFVEKYIINHGKNIVQDEENGEKKIKKLASPDFIAILLC 271
Query: 74 FISGISLLGTPTELYLFGTAYVFSLFG 100
I+ S + T + G+AY +FG
Sbjct: 272 IITRFSQIFLNTTIESIGSAYTMMMFG 298
>Z83221-6|CAB05703.3| 210|Caenorhabditis elegans Hypothetical
protein C49A1.10 protein.
Length = 210
Score = 29.1 bits (62), Expect = 6.8
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 60 NMKLVPVCFSLVASFISGISLLGTPTELYLFGTAY-VFSLFGAVAMSLILGSTFLPVFH- 117
N+K + ++V F+ +++ G +LFG+ Y ++ L G +++ +IL + L V+
Sbjct: 10 NLKTAGLVVAVVELFLCALAVYGLFRNFHLFGSNYFIWFLLGIISVFIILIAIALFVYAI 69
Query: 118 ELQITSVYEGGLKAVVWTDVLQTIVMVSAMILVIF 152
+ + L A ++ + +V V IL++F
Sbjct: 70 KSENARWLIPHLSAQIFLVIFLILVAVIVAILMLF 104
>Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical
protein C14A4.12b protein.
Length = 697
Score = 29.1 bits (62), Expect = 6.8
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 37 LIGIYFGFVNKQKSTQDYLMGGRNMKLVPVCFSLVASFISGISLLGTPTELYLFGTAYVF 96
L+ I+ FV ++ M N KL+ V FS IS +SL+ LY T +
Sbjct: 336 LLAIFLTFVLSRRDATRVNMSHLN-KLIFVGFSAFFLIIS-LSLINV--NLYALFTKQFY 391
Query: 97 SLFGAVAMSLILGSTFLPVFHELQITSVYEGGLKAVVWTDVLQTIVMVSAMILVIFKSTI 156
+F L + FL +F L + S + A+ ++ I ++A L IF +
Sbjct: 392 KIFHTSEQKLPFLTAFLALFTGLSVLSKFNFITIAI---SLVLGIFSINATYLHIF--SF 446
Query: 157 IVGGINEVLRRNWSTDRLAFPSLTFD-LTERHSIWSV 192
I N S + L PS T+D TE S+ ++
Sbjct: 447 IYLQKNGYFIDGTSAEFLVLPSDTYDNNTESSSVHTI 483
>Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical
protein C14A4.12a protein.
Length = 717
Score = 29.1 bits (62), Expect = 6.8
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 37 LIGIYFGFVNKQKSTQDYLMGGRNMKLVPVCFSLVASFISGISLLGTPTELYLFGTAYVF 96
L+ I+ FV ++ M N KL+ V FS IS +SL+ LY T +
Sbjct: 356 LLAIFLTFVLSRRDATRVNMSHLN-KLIFVGFSAFFLIIS-LSLINV--NLYALFTKQFY 411
Query: 97 SLFGAVAMSLILGSTFLPVFHELQITSVYEGGLKAVVWTDVLQTIVMVSAMILVIFKSTI 156
+F L + FL +F L + S + A+ ++ I ++A L IF +
Sbjct: 412 KIFHTSEQKLPFLTAFLALFTGLSVLSKFNFITIAI---SLVLGIFSINATYLHIF--SF 466
Query: 157 IVGGINEVLRRNWSTDRLAFPSLTFD-LTERHSIWSV 192
I N S + L PS T+D TE S+ ++
Sbjct: 467 IYLQKNGYFIDGTSAEFLVLPSDTYDNNTESSSVHTI 503
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 29.1 bits (62), Expect = 6.8
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 286 GIFIAGVFSAALSSLSTGLNSMAAVVLED---FWKPFCKVPTPKQSQIIVRLVVIILGCI 342
G F++ F AAL L + + ++ +D PF +V K ++ + LV+ ++
Sbjct: 469 GAFLS-TFGAALQCLCSAPRLLQSIAKDDVIPILAPFARVT--KNNEPFLGLVLTVIIAE 525
Query: 343 CFGLVFVVEKLGSVLQLTMSLSSASMGPLAGVFLM 377
C L+ V+K+ VL ++ + +G F+M
Sbjct: 526 CGILLGAVDKIAEVLDFFFLMTLSLLGAALCFFIM 560
>Z81139-5|CAB03481.2| 359|Caenorhabditis elegans Hypothetical
protein W05H5.6 protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 304 LNSMAAVVLEDFWKPFCKVPTPKQSQIIVRLVVIILGCICFGLVFV 349
+NS ++ + W P P Q+I+ ++ +++ +C LV V
Sbjct: 3 INSNSSTIFSSIWLPVFFYVEPLDQQVIISILELMIYLVCIHLVNV 48
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.140 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,500,288
Number of Sequences: 27539
Number of extensions: 349280
Number of successful extensions: 1122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1108
Number of HSP's gapped (non-prelim): 11
length of query: 455
length of database: 12,573,161
effective HSP length: 84
effective length of query: 371
effective length of database: 10,259,885
effective search space: 3806417335
effective search space used: 3806417335
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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