GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002622-TA|BGIBMGA002622-PA|undefined
         (75 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18197-1|CAB62169.1|  682|Drosophila melanogaster ARALAR 1 prote...    25   9.6  
AY058654-1|AAL13883.1|  682|Drosophila melanogaster LD35441p pro...    25   9.6  
AE014297-4598|AAN14230.1|  682|Drosophila melanogaster CG2139-PD...    25   9.6  
AE014297-4597|AAF57049.1|  682|Drosophila melanogaster CG2139-PA...    25   9.6  
AE014297-4596|AAF57050.3|  679|Drosophila melanogaster CG2139-PB...    25   9.6  
AE014297-4595|AAF57048.1|  695|Drosophila melanogaster CG2139-PC...    25   9.6  

>Y18197-1|CAB62169.1|  682|Drosophila melanogaster ARALAR 1 protein
           protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 29  QIRRLHKEPPHPTEDPFIQAYGNSKETCLIN 59
           Q   LH + P   + PFI+ Y   K+  LIN
Sbjct: 122 QKTELHSKIPFSLDGPFIKRYFGDKKQRLIN 152


>AY058654-1|AAL13883.1|  682|Drosophila melanogaster LD35441p
           protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 29  QIRRLHKEPPHPTEDPFIQAYGNSKETCLIN 59
           Q   LH + P   + PFI+ Y   K+  LIN
Sbjct: 122 QKTELHSKIPFSLDGPFIKRYFGDKKQRLIN 152


>AE014297-4598|AAN14230.1|  682|Drosophila melanogaster CG2139-PD,
           isoform D protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 29  QIRRLHKEPPHPTEDPFIQAYGNSKETCLIN 59
           Q   LH + P   + PFI+ Y   K+  LIN
Sbjct: 122 QKTELHSKIPFSLDGPFIKRYFGDKKQRLIN 152


>AE014297-4597|AAF57049.1|  682|Drosophila melanogaster CG2139-PA,
           isoform A protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 29  QIRRLHKEPPHPTEDPFIQAYGNSKETCLIN 59
           Q   LH + P   + PFI+ Y   K+  LIN
Sbjct: 122 QKTELHSKIPFSLDGPFIKRYFGDKKQRLIN 152


>AE014297-4596|AAF57050.3|  679|Drosophila melanogaster CG2139-PB,
           isoform B protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 29  QIRRLHKEPPHPTEDPFIQAYGNSKETCLIN 59
           Q   LH + P   + PFI+ Y   K+  LIN
Sbjct: 119 QKTELHSKIPFSLDGPFIKRYFGDKKQRLIN 149


>AE014297-4595|AAF57048.1|  695|Drosophila melanogaster CG2139-PC,
           isoform C protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 29  QIRRLHKEPPHPTEDPFIQAYGNSKETCLIN 59
           Q   LH + P   + PFI+ Y   K+  LIN
Sbjct: 135 QKTELHSKIPFSLDGPFIKRYFGDKKQRLIN 165


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.129    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,111,194
Number of Sequences: 52641
Number of extensions: 88164
Number of successful extensions: 226
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 6
length of query: 75
length of database: 24,830,863
effective HSP length: 55
effective length of query: 20
effective length of database: 21,935,608
effective search space: 438712160
effective search space used: 438712160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)