GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002621-TA|BGIBMGA002621-PA|IPR001734|Na+/solute
symporter
         (279 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.47 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 198  FYKPFYSKELSDRQTAWLMRGVVILLGALCVALVFIV 234
            F+   Y+   S  +  WL    +  LG +C A VF +
Sbjct: 976  FFPIDYTSAFSSEKIVWLHLVYISFLGIICAADVFYI 1012


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 218 GVVILLGALCVALVF 232
           GV+I +G LC+  +F
Sbjct: 47  GVIITIGCLCIWSIF 61


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/25 (32%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 225 ALCVALVFIVEKMGTILQLTMTLES 249
           ALC   +F++  +G++LQ+ ++++S
Sbjct: 669 ALCNG-IFLLLTLGSLLQMVISMDS 692


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.142    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,859
Number of Sequences: 317
Number of extensions: 2221
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 279
length of database: 114,650
effective HSP length: 56
effective length of query: 223
effective length of database: 96,898
effective search space: 21608254
effective search space used: 21608254
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)