GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002621-TA|BGIBMGA002621-PA|IPR001734|Na+/solute
symporter
         (279 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    30   0.064
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 30.3 bits (65), Expect = 0.064
 Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 1/103 (0%)

Query: 1   MNEINGNVEDIVIQMRRFTWVDYVVFVFMLAISAVVGVYWGFMKKQTTQTDYLLGGRNMK 60
           M++++   ++ V   + FT  DY++     A + +  +  GF +    + +     RN K
Sbjct: 268 MSKLSSKDDEYVFSWKLFTGWDYMIGHMETAQNRMASIILGFKEALLEEAEKKKDTRNWK 327

Query: 61  GGLQAVVWTDVIQITAMFGAM-AIVAVKGTMDVGGIGVVWQRN 102
             L  ++   +I    +  A   I+ VK +MD+      W+RN
Sbjct: 328 IILLRILVNFLILGLLVISAYEVILVVKRSMDIKESDSWWRRN 370


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 21  VDYVVFVFMLAISA-VVGVYWGFMKKQTTQ-TDYL 53
           V  +   F++A+   ++GV WGF+    T+ TD++
Sbjct: 438 VSGIASFFVVALGGTIIGVIWGFLTGLVTRFTDHV 472


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.142    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,236
Number of Sequences: 2123
Number of extensions: 8362
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 2
length of query: 279
length of database: 516,269
effective HSP length: 63
effective length of query: 216
effective length of database: 382,520
effective search space: 82624320
effective search space used: 82624320
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 47 (23.0 bits)