Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002620-TA|BGIBMGA002620-PA|IPR000433|Zinc finger,
ZZ-type
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 43 8e-04
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 40 0.006
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 39 0.010
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 38 0.023
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 37 0.041
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 37 0.054
03_02_0459 + 8649448-8651994 36 0.094
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 34 0.38
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 33 0.50
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 33 0.88
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 33 0.88
01_07_0384 + 43209423-43210241 33 0.88
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 32 1.2
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 31 2.0
07_02_0030 + 12002825-12003510,12003654-12003708,12003911-120039... 31 2.0
04_04_1060 - 30473509-30473619,30473815-30473850,30474063-304740... 31 2.0
03_06_0063 - 31391870-31392679 31 2.0
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 31 2.7
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 31 3.6
08_02_1595 - 28114751-28114858,28115018-28115283,28116609-281167... 31 3.6
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 31 3.6
06_01_0773 - 5784722-5784811,5784888-5784923,5785003-5785104,578... 31 3.6
05_03_0459 - 14284513-14286336 31 3.6
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 31 3.6
03_06_0276 - 32809801-32809997,32810100-32810436 31 3.6
01_06_0482 - 29672720-29673854,29673941-29676267 31 3.6
11_06_0184 - 21006659-21009823 30 4.7
09_02_0608 + 11194889-11195134,11195185-11195406 30 4.7
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 30 4.7
04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339 30 4.7
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 30 4.7
01_06_1196 + 35322662-35324212 30 4.7
12_01_0500 + 3966456-3968556,3968640-3969087,3969524-3969718,396... 30 6.2
10_07_0117 + 13028336-13028404,13029073-13029174,13031108-130313... 30 6.2
08_02_0100 + 12350498-12350538,12351216-12351717 30 6.2
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 30 6.2
05_07_0240 + 28606345-28607316 30 6.2
04_04_0901 - 29247518-29247634,29248990-29250273 30 6.2
03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678... 30 6.2
03_02_0950 + 12661008-12662312,12662403-12662576 30 6.2
02_04_0147 + 20194244-20195717,20195953-20195969 30 6.2
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 6.2
01_06_1826 - 40164306-40164355,40165019-40165095,40165796-401658... 30 6.2
12_01_1110 + 11756814-11757485,11757566-11757644,11757705-117579... 29 8.2
07_03_1239 + 25077597-25077684,25077779-25078419 29 8.2
06_03_0433 - 20718726-20719895 29 8.2
05_04_0407 - 21040536-21041352,21041452-21042044 29 8.2
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 29 8.2
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 42.7 bits (96), Expect = 8e-04
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 121 VHSGVVCNVCN-SPVVGFRYKCAICHDYDLCSKC-EAAGNHNEHCMVRLPT 169
+H + C+ C +P+ G RYK I DYDLC+ C GN NE+ + P+
Sbjct: 459 LHRWIQCDGCGVTPIAGSRYKSNIKDDYDLCNTCFSRMGNVNEYTRIDRPS 509
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 39.9 bits (89), Expect = 0.006
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 113 ENTDGNTAVHSGVVCNVCN-SPVVGFRYKCAICHDYDLCSKC-EAAGNHNEHCMVRLP 168
EN+ T H + C+ C P+VG RYK DYDLC C GN E+ + P
Sbjct: 417 ENSPART-FHRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYTRIDKP 473
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 39.1 bits (87), Expect = 0.010
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 127 CNVCNSPVVG-FRYKCAICHDYDLCSKCEAAG 157
CN CN + G R KC+ C D+DLC +C + G
Sbjct: 53 CNYCNKDISGKIRIKCSKCPDFDLCVECFSVG 84
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 37.9 bits (84), Expect = 0.023
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 6/149 (4%)
Query: 309 PSQQTPQSQNASQKCPPNTTATA--PLFDNGGTSGPKIQFDVNQEPDPKVLDDLQKVLNI 366
P +Q S +S + + A P+ +NG G D + D ++ +D + +
Sbjct: 103 PVKQESSSDESSDESSDDEDAKPADPVANNGLKKGKPASSDSESDSDDEMDEDEKPAAPV 162
Query: 367 IRTKYIEPHNNAKLQNPSTSANDQPQASGEDSDKPATSQAQGGEGDANIAIDVDKTDAKS 426
+T K ++ S S+ + S D D P S+A + + D ++++ S
Sbjct: 163 KKTSVTAQ----KKKDDSDSSESESDESDSDEDVPTKSKAPAVAAKNDDSTDGSESESDS 218
Query: 427 VNXXXXXXXGQDKEASSDKVDDWTMVNKD 455
+ KE+SSD+ DD + + D
Sbjct: 219 EDEDAAPKGAAKKESSSDEEDDSSEESSD 247
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 37.1 bits (82), Expect = 0.041
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 116 DGNTAVHSGVVCNVCNS-PVVGFRYKCAICHD---YDLCSKC-----EAAGNHNEH 162
D + VH GV C+ C P+ G RYKC C + +DLC +C + G N+H
Sbjct: 228 DDLSDVHIGVGCDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTKSKLPGRFNQH 283
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 36.7 bits (81), Expect = 0.054
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 350 QEPDPKVLDDLQKVLNIIRTKYI-EPHNNAKLQNPS--TSANDQPQ-ASGEDSDKPATSQ 405
+E K ++D +TK +P +A ++ P T+AND + A+ E+ DK
Sbjct: 1116 EESTEKTVEDTTVEAPDEKTKTANDPVEDATVEEPDKKTAANDPVEDATVEEPDKKTA-- 1173
Query: 406 AQGGEGDANIAIDVDKTDAKSVNXXXXXXXGQDKEASSDKVDDWTMVNKDLMDSSANEHI 465
A DA + KT A K A++D V+D T+ D ++AN+H+
Sbjct: 1174 ANDPVEDATVEEPDKKTAANDPAEDATVEEPDKKTAANDHVEDATLEEPD-KKTAANDHV 1232
Query: 466 MDVPV 470
DV V
Sbjct: 1233 EDVTV 1237
>03_02_0459 + 8649448-8651994
Length = 848
Score = 35.9 bits (79), Expect = 0.094
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 98 DDDCEIEITATTMFPENTDGNTAVHSGVVCNVCNSPVVGFRYKCAICHDYDLCSKCEAAG 157
D D I +T + E++D H C++C P++G R+K H + LC++C + G
Sbjct: 751 DPDWGFGILSTLVKLEDSDHIR--HGRHTCSICRYPIIGSRFK-ETKHSFSLCNRCYSEG 807
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 33.9 bits (74), Expect = 0.38
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 299 ASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGP 342
A+ + N NP+ TP + K P N A AP+F G +GP
Sbjct: 2 ATPTGNPNPNPNPSTPFEVSMLFKPPSNAPAAAPIFPGGPAAGP 45
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 127 CNVCNS-PVVGFRYKCAICHDYDLCSKC 153
C+ C++ P++ R+ C IC D+DLC C
Sbjct: 2609 CDGCSTVPILRRRWHCNICPDFDLCETC 2636
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 32.7 bits (71), Expect = 0.88
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 127 CNVCNSPVVGFRYKCAICHDYDLCSKCEAAGNHN 160
CN C+ RY C D+DLCS C G N
Sbjct: 286 CNSCSVDCSKKRYHCRTQADFDLCSDCYNEGKFN 319
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 32.7 bits (71), Expect = 0.88
Identities = 26/93 (27%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 250 NLVGDIGLDMDISTEHXXXXXXXXXSEYQSTSQEVPHPQNTDQASETPKASEAASLNRNP 309
NL GLD + S STS P Q+ S P AS S P
Sbjct: 1114 NLFDGNGLDSSAGAD----SSSSTGSPPSSTSSSPPSSQSPPPGSSPPPASPPPSTPSAP 1169
Query: 310 SQQTPQSQNASQKCPPNTTATAPLFDNGGTSGP 342
P + + S PP+ + +AP + GG P
Sbjct: 1170 ----PTNSSGSAPSPPSPSQSAPPANTGGGGSP 1198
>01_07_0384 + 43209423-43210241
Length = 272
Score = 32.7 bits (71), Expect = 0.88
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 122 HSGVVCNVCNSPVVGFRYKCAICHDYDLCSKCEAAG 157
HS + C +CNS + FR++C +C C +C AG
Sbjct: 103 HSNI-CALCNSYIYLFRHRCLVCGRV-YCRRCVGAG 136
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 32.3 bits (70), Expect = 1.2
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 335 DNGGTSGPKIQFDVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSANDQPQAS 394
D +G KI+ + P + + LQK N ++ K + N AK + + A D +
Sbjct: 85 DGFSVAGRKIRVKLATHRAP-LKERLQKKENAMQAKDADVTNEAKDADSTNEAQDADATN 143
Query: 395 GEDSDKPATSQAQGGEGDANIAIDVDKTDAKSV 427
ED A + + DA + D TDA +V
Sbjct: 144 EEDDTSTAKHKETSHKKDAGLERDGCTTDAAAV 176
>08_01_0068 +
471729-472460,472578-472655,473270-473507,474130-474205,
474820-474961,475326-475619,476037-476249
Length = 590
Score = 31.5 bits (68), Expect = 2.0
Identities = 41/172 (23%), Positives = 65/172 (37%), Gaps = 24/172 (13%)
Query: 287 PQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGPKIQF 346
P D +S++P + +P+ Q+ NA PP AP P +
Sbjct: 31 PSTVDASSKSPSSPSTEENGTSPAHH--QADNAPVIAPPPVPEPAP----PEPEKPAVST 84
Query: 347 DVNQEPDPKVLDDLQKVLNIIRTKYIEPHNN-AKLQNPSTSANDQPQASGEDSDKPATSQ 405
DV Q PKV ++ L K +E H ++ + P +P ++ ++ K +
Sbjct: 85 DV-QNAKPKVYSRVR--LKFKSAKVLETHQGPSEAKAPVDGGGGKPASAAPEASKEVAEK 141
Query: 406 A---QGGEGDANIA----IDVDKT-------DAKSVNXXXXXXXGQDKEASS 443
A G+ DA A D DK + KSV QD++A S
Sbjct: 142 AIVSPDGQKDAQAAELSGSDKDKMARKVASINIKSVGLSSVEDKNQDRKADS 193
>07_02_0030 +
12002825-12003510,12003654-12003708,12003911-12003996,
12004093-12004433,12004512-12004699,12004776-12004962,
12005035-12005139,12005202-12005239,12005369-12005653
Length = 656
Score = 31.5 bits (68), Expect = 2.0
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 281 SQEVPHPQNTDQASETPKASEAASLNRNPSQQTP---QSQNASQKCPPNTTATAPL---- 333
S E P N D +SE P S++A SQ+ P QS K P A A
Sbjct: 304 SDEQPATDNIDPSSEPPAGSQSAEAGVGASQELPTRNQSDTEQNKDIPEVEAQADSPPKK 363
Query: 334 ---FDNGGTSGPKIQFDVNQEPD---PKVLDDLQKVLNI 366
D G +S K+Q + P+ ++ D +++L I
Sbjct: 364 DVNVDPGSSSPAKVQGPTHPRPEIITGPMIGDEEEILRI 402
>04_04_1060 -
30473509-30473619,30473815-30473850,30474063-30474095,
30474246-30474335,30474466-30475215
Length = 339
Score = 31.5 bits (68), Expect = 2.0
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 292 QASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGPKIQFDVNQE 351
+ASETP+ S+ + R PS +TPQ A+ N ++ DN P+ +
Sbjct: 63 EASETPRRSQ---IFRKPSTRTPQGSTATDNISRNAASSYSENDN----RPR------ET 109
Query: 352 PDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNP-STSANDQPQASGEDSDKPATSQAQGGE 410
P ++ L++ +N R + + N+ N S +++ + S + A+ + E
Sbjct: 110 PGRDLIARLKERVNASRKRSLNRENSPSSPNGLSATSSSSSRTVSRPSHRAASRIRKADE 169
Query: 411 GDANIAIDVDKTDAKSVNXXXXXXXGQDKEASSDKVDDWTMVNKDLMDSS 460
G A++V + + G + S VDD+ +V + DS+
Sbjct: 170 GANAGAVNVRRDSS-----------GDTRRNSDRDVDDFLLVEQAARDST 208
>03_06_0063 - 31391870-31392679
Length = 269
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 133 PVVGFRYKCAICHDYDLCSKCEAAGNHNEHCMVRLPTPDMSRTLIKAAI 181
P G +KC++C S +A G H V+LPTP + L A +
Sbjct: 91 PPAGAEFKCSVCGKS--FSSYQALGGHKTSHRVKLPTPPAAPVLAPAPV 137
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 127 CNVCNSPVVGFRYKCAICHDYDLCSKCEAAGN 158
CN C+ RY C D+DLC C GN
Sbjct: 277 CNSCSVDCSRKRYHCRTQADFDLCCDCYDKGN 308
>09_04_0163 -
15249816-15249920,15250032-15250163,15250463-15250629,
15251259-15251448,15252530-15252661,15253275-15253382,
15253513-15253608,15253702-15253809,15253917-15254089,
15255026-15255401,15255887-15256030,15256125-15256799,
15256917-15256982,15257082-15257249
Length = 879
Score = 30.7 bits (66), Expect = 3.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 283 EVPHPQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPP 325
E HP NTD S+ PK + S + ++ + + S+ PP
Sbjct: 433 EQNHPNNTDVCSQLPKTPQTKSTAEHKTKSNINNTSTSKGAPP 475
>08_02_1595 -
28114751-28114858,28115018-28115283,28116609-28116703,
28117179-28118154,28118245-28118369,28118443-28118569,
28118606-28118843
Length = 644
Score = 30.7 bits (66), Expect = 3.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 285 PHPQNTDQASETPKASEAASLNRNPSQ-QTPQSQNASQKCPPNTTATAPLFDNGGTSGP 342
P PQ Q S T S +AS NR Q +TP+S ++ P AP + GP
Sbjct: 215 PQPQQQAQ-SATLLPSSSASTNREDDQCRTPRSGSSGNMSPEPAGRVAPPLSEASSPGP 272
Score = 29.5 bits (63), Expect = 8.2
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
Query: 282 QEVPHPQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKC---PPNTTATAPLFDNGG 338
+E PH + + + + + A + +P TPQ Q +Q P ++ +T D
Sbjct: 183 EESPHSRGSQEGCSSSSSPSAVTKEASPPPPTPQPQQQAQSATLLPSSSASTNREDDQCR 242
Query: 339 TSGPKIQFDVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSANDQPQASGEDS 398
T +++ EP +V L + + +Y Q+ ST +D + + E +
Sbjct: 243 TPRSGSSGNMSPEPAGRVAPPLSEASSPGPLEY-RVCKPIGAQDASTQTDDSERDAPERN 301
Query: 399 DKPATSQAQGGEGDANI 415
+ A + D+ I
Sbjct: 302 SRMAGVCTENSTSDSEI 318
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 30.7 bits (66), Expect = 3.6
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 278 QSTSQEVPHPQNT---DQASETPKASEAASLNRNPSQQTPQSQNASQKCP-PNTTATAPL 333
Q S V +NT ++ASE + S S + ++T + AS K P +TT P
Sbjct: 1117 QDDSASVEPSENTITLEKASEEDEGSVKPSEGNDALEKTLEEDEASAKLPEDSTTFEKPS 1176
Query: 334 -FDNGGTSGPKIQFDVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSANDQPQ 392
D+ GT + + +EP+ N K +E + + + D+P
Sbjct: 1177 EKDDAGTKQTEDPVTLEKEPEEDKGSVEPTQDNAGLEKPLEEDEASAKPSEDSVVLDKPS 1236
Query: 393 ASGEDSDKPA 402
+DS KP+
Sbjct: 1237 VEDDDSAKPS 1246
>06_01_0773 -
5784722-5784811,5784888-5784923,5785003-5785104,
5785154-5785213,5785988-5786068,5786069-5786113,
5786870-5786944,5787383-5787445,5787531-5787971
Length = 330
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 285 PHPQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLF 334
P P ++ +S + AA+ NPS P S ++S PPN A A F
Sbjct: 4 PPPNSSSSSSSSSSLPLAAAPMSNPS--APSSSSSSSSLPPNPLAAASSF 51
>05_03_0459 - 14284513-14286336
Length = 607
Score = 30.7 bits (66), Expect = 3.6
Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 2/138 (1%)
Query: 389 DQPQASGEDSDKPATSQAQGGEGDANIAIDVDKTDAKSVNXXXXXXXGQDKEASSDKVDD 448
D P++S SD ++S + G G ++ + + + S G D +A +D +
Sbjct: 264 DSPRSSSSRSDSSSSSSSSNGSGSSSSSSSGASSGSSSCAGSSSSSSGSDTDADADSASN 323
Query: 449 WTMVNKDLMDSSANEHIMDVPVAPIGFNLPKEFQQRVTIGQLLYPQLN-TATAVLKPKEV 507
D + + +++ V L E QL + + P V
Sbjct: 324 RPDTTTDHPTEAEVKPMVEHEVMEQDKKLTTERAAASPASQLCITDMGIDICGGVSPLVV 383
Query: 508 ERPKEFQPVAAQRQDNQQ 525
++ +F P+ Q+Q++ +
Sbjct: 384 DK-AQFSPLPKQQQEDDE 400
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 285 PHPQNTDQASETPKASEAASLNRN-PSQQTPQSQNASQKCPPNTTATAP 332
P P T + +P RN PS P SQ A PP TT T P
Sbjct: 65 PLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTP 113
>03_06_0276 - 32809801-32809997,32810100-32810436
Length = 177
Score = 30.7 bits (66), Expect = 3.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 303 ASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTS 340
A+ +P+ QTP + A TT TAP NGG S
Sbjct: 121 AATTTSPATQTPGATGAGTGVGSKTTPTAPYLINGGAS 158
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 30.7 bits (66), Expect = 3.6
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 253 GDIGLDMDISTEHXXXXXXXXXSEYQSTSQEVPHPQNTDQASETPKASEAASLNR-NPSQ 311
GD L DI T H S + S +P P +QA P+ ++S + PS
Sbjct: 21 GDAALARDIVTLHKALSLDHSASSRRRRSLPLPAPSVANQARHKPRLKPSSSTRKLLPSA 80
Query: 312 QTPQSQNASQKCPPNTTAT 330
+ S +A+ +++++
Sbjct: 81 SSSSSSSAAAAASTSSSSS 99
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 30.3 bits (65), Expect = 4.7
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 23/136 (16%)
Query: 279 STSQEVPHPQ-NTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNG 337
S ++ P PQ N+D E P A ++ N+ +Q P Q+ P D G
Sbjct: 203 SDDEQQPRPQLNSDGGKEQPLAPQSDGRNK---EQLPPPQSGGGNGIKQQQPLPPQSDGG 259
Query: 338 GTSGPKIQFDVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSAND---QPQAS 394
++P P + D K + + P K Q P S D QP
Sbjct: 260 D----------KEQPPPSLSDGGDK------DQPLPPDCGVKRQLPPQSDGDDKQQPPPQ 303
Query: 395 GEDSDKPATSQAQGGE 410
+ SD+P Q GG+
Sbjct: 304 SDGSDQPPPPQPDGGD 319
>09_02_0608 + 11194889-11195134,11195185-11195406
Length = 155
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 281 SQEVPHPQNTDQASETPKASEAA-SLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGT 339
S P P QA + L P Q+ PQ+ + ++ P NGGT
Sbjct: 12 SAAAPVPMPAHQARRALSDLQTILGLGAAPPQRLPQTSSGQRRVTPMAPPQQRQQVNGGT 71
Query: 340 SGPKIQFDVNQEP 352
+ P VNQ P
Sbjct: 72 AVPMASLPVNQAP 84
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 283 EVPHPQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPP 325
E HP NTD S+ PK + S + ++ + + S+ PP
Sbjct: 201 EQNHPNNTDVCSQLPKTPQTKSTVEHETKSNINNTSTSKGAPP 243
>04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339
Length = 503
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 289 NTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGPKIQFDV 348
N D+ + K+ + S N+ P TP+ + AS+ P T++ L + G G +
Sbjct: 350 NDDEGDDGNKSGDKGSPNKLPKHTTPRKKLASRPRPKIRTSSRKLKNEKGEKGKIVLVPS 409
Query: 349 NQEP 352
+ P
Sbjct: 410 HSSP 413
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 130 CNSPVVGFRYKCAICHDYDLCSKCEAAGNHNEHCMVRLPTPDMSR 174
C PV RY C CH+ L S E G+++ C +PD SR
Sbjct: 1592 CLEPVWPSRYHCLTCHETYLIS-TEFEGHNDGKCSKIHQSPDESR 1635
>01_06_1196 + 35322662-35324212
Length = 516
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 117 GNTAVHSGVVCNVCNSPVVGFRYKCAICHDYDLCSKCEAAG 157
GN VH+ + +C +P F HDYDL AAG
Sbjct: 329 GNMYVHTAMFLLLCVAPFWVFNITALHIHDYDLSDAVGAAG 369
>12_01_0500 +
3966456-3968556,3968640-3969087,3969524-3969718,
3969891-3970119
Length = 990
Score = 29.9 bits (64), Expect = 6.2
Identities = 36/151 (23%), Positives = 52/151 (34%), Gaps = 6/151 (3%)
Query: 281 SQEVPHPQNTDQASETPK-ASEAAS--LNRNPSQQTPQSQNASQKCPPNTTATAPLFDNG 337
S E P Q+ D A K + AS + PS T +N++ + P +T D
Sbjct: 191 SPEDPDKQSADDAPTDGKDTGDQASGDADEAPSTDTKGKKNSTAEEPRDTKDAGENADEA 250
Query: 338 GTSGPKIQFDVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSANDQPQASGED 397
T + + D K D + +T + + N K+ T A D
Sbjct: 251 STETKADKSSDDTPTDAKATGD-GGTPSKNQTSFDD--ENGKMDGVETVAEDGKVTEKSS 307
Query: 398 SDKPATSQAQGGEGDANIAIDVDKTDAKSVN 428
P GG G+A D T A S N
Sbjct: 308 EQVPTNGDDGGGGGEAQTTDDDTATGASSNN 338
>10_07_0117 +
13028336-13028404,13029073-13029174,13031108-13031367,
13031813-13031882,13031935-13031966,13032736-13032823,
13033431-13033742,13033822-13033896,13034018-13034559,
13034936-13035044,13035713-13035892,13036243-13036404
Length = 666
Score = 29.9 bits (64), Expect = 6.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 381 QNPSTSANDQPQASGEDSDKPATSQAQGGEGDANIAIDVDKT 422
Q P P ++ D ++P S ++ G AN+A VD+T
Sbjct: 390 QQPGVQPGVNPDSASGDGNRPVQSNSEVEHGIANLAEHVDRT 431
>08_02_0100 + 12350498-12350538,12351216-12351717
Length = 180
Score = 29.9 bits (64), Expect = 6.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 132 SPVVGFRYKCAICHDYDLCSKCEAAGNHNEHCMVRLPTPDMSRTLIKAA 180
S VG +KC++C S +A G H +LPTP S L A+
Sbjct: 115 SAPVGAEFKCSVCGRS--FSSYQALGGHKTSHRFKLPTPPASPVLAPAS 161
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 29.9 bits (64), Expect = 6.2
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 25/173 (14%)
Query: 287 PQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGPKIQF 346
P D +S++P + +P+ Q+ NA PP AP P +
Sbjct: 31 PSTVDASSKSPSSPSTEENGTSPAHH--QADNAPVIAPPPVPEPAP----PEPEKPAVST 84
Query: 347 DVNQEPDPKVLDDLQKVLNIIRTKYIEPHNN-AKLQNPSTSANDQPQASGEDSDKPATSQ 405
DV Q PKV ++ L K +E H ++ + P +P ++ ++ K ++
Sbjct: 85 DV-QNAKPKVYSRVR--LKFKSAKVLETHQGPSEAKAPVDGGGGKPASAAPEASKEVVAE 141
Query: 406 ----AQGGEGDANIA----IDVDKT-------DAKSVNXXXXXXXGQDKEASS 443
+ G+ DA A D DK KSV QD++A S
Sbjct: 142 KAIVSPDGQKDAQAAELSGSDKDKVARKVASIKIKSVGLSSVEDKNQDRKADS 194
>05_07_0240 + 28606345-28607316
Length = 323
Score = 29.9 bits (64), Expect = 6.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 285 PHPQNTDQASETPKASEAASLNRNP-SQQTPQSQNASQKCPPNTTATAP 332
P P A+ TP + AA+ +R+ S++ P S + +Q P T T P
Sbjct: 16 PSPSAAAAAAATPTPAAAAASSRSSRSKKPPHSSDPNQSKKPRLTLTVP 64
>04_04_0901 - 29247518-29247634,29248990-29250273
Length = 466
Score = 29.9 bits (64), Expect = 6.2
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 255 IGLDMDISTEHXXXXXXXXXSEYQSTSQEV---PHPQNTDQASETPKASE-AASLNRNPS 310
+G D ++ SE++ + P P T A+ TP + A + R+PS
Sbjct: 182 LGDDDEVEAAMSGTGSAVTGSEWEEQLNSITAAPSPPLT--AATTPNNNNNAVGMTRSPS 239
Query: 311 QQTPQSQNASQKCPPNTTAT 330
+ + ++S C P T+AT
Sbjct: 240 NSSTSTASSSASCSPPTSAT 259
>03_02_0994 -
13067254-13067379,13067483-13067521,13067824-13067893,
13068025-13068116,13068237-13068319,13068590-13068633,
13068682-13068800,13068883-13068915,13069152-13069239,
13069364-13069413
Length = 247
Score = 29.9 bits (64), Expect = 6.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 123 SGVVCNVCNS--PVVGFRYKCAICHDYDLCSKCE 154
S V+C VC++ PV Y C +C CS C+
Sbjct: 45 STVICLVCDTEQPVAQVCYNCGVCMGEYFCSACK 78
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 29.9 bits (64), Expect = 6.2
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 289 NTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSG 341
N S P+ + A+ N NPS +P S P TT +P+ GG G
Sbjct: 141 NAPLRSSAPQTYKPANANPNPS-GSPFSMGGMASTLPKTTTGSPMSSGGGGYG 192
>02_04_0147 + 20194244-20195717,20195953-20195969
Length = 496
Score = 29.9 bits (64), Expect = 6.2
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 377 NAKLQNPSTSANDQPQASGEDSDKPATSQAQGGEGDANIAIDVDKTDAKSVNXXXXXXXG 436
N Q P+ + +DQ +A+ D+ A + Q + A + D+ A++ + G
Sbjct: 24 NGDDQEPAANGDDQAEAAANGGDQAAAANDQAAAENDQAAAENDQAAAEN-DQAAAANGG 82
Query: 437 QDKEASSD 444
+ +EA+ D
Sbjct: 83 EHEEANRD 90
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 6.2
Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 288 QNTD-QASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGPKIQF 346
Q TD +S P+ + S Q+T Q T T NG ++ +
Sbjct: 1555 QETDLSSSSNPEEAVQESDLVKSEQETDVQQEQELDSTEETKGTEDYQQNGVSTCEESVT 1614
Query: 347 DVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSANDQPQASGEDSDKP 401
+V D + + + + + + + E +K N +TS N ++S +++D+P
Sbjct: 1615 EVEPNVDDQHVQENKSAVEVKENEDTETEEISKQINFTTSENGAQESSEQEADQP 1669
>01_06_1826 -
40164306-40164355,40165019-40165095,40165796-40165890,
40166028-40166099,40166200-40166287,40166481-40166557
Length = 152
Score = 29.9 bits (64), Expect = 6.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 325 PNTTATAPLFDNGGTSGPKIQFDVNQEPDPKVLDDLQKVLN---IIRTKYIEPHNNAKLQ 381
P A + GG S P + +N+ P P +D QK L+ II K++ +
Sbjct: 7 PRNEAGSKQAGRGGESNPIMWASINRPPTPNREEDPQKELSLREIINVKFLPLGAEKAVD 66
Query: 382 NPSTSANDQPQ 392
+P+T P+
Sbjct: 67 SPATGDVQSPK 77
>12_01_1110 +
11756814-11757485,11757566-11757644,11757705-11757991,
11758072-11758131,11758311-11758976
Length = 587
Score = 29.5 bits (63), Expect = 8.2
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 288 QNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNGGTSGPKIQFD 347
Q D+ +AA+ +P +TP + + ++ PP TA A T+ K
Sbjct: 301 QALDEEELREDVDQAAAEMSDPEDKTPSA--SPKQTPPTPTAPAHFRRKKKTAVKKKSAT 358
Query: 348 VNQEPDPKVLDDL 360
+ +P P VL DL
Sbjct: 359 IASKPAPPVLTDL 371
>07_03_1239 + 25077597-25077684,25077779-25078419
Length = 242
Score = 29.5 bits (63), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 127 CNVCNSPVVGFRYKC-AICHDYDLCSKC 153
CN+C PV G Y+C C D+ + C
Sbjct: 47 CNICELPVTGVGYRCNHHCSDFAIHEAC 74
>06_03_0433 - 20718726-20719895
Length = 389
Score = 29.5 bits (63), Expect = 8.2
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 335 DNGGTSGPKIQFDVNQEPDPKVLDDLQKVLNIIRTKYIEPHNNAKLQNPSTSANDQPQAS 394
+ GG+ G I + PD D + + + K ++ ++N S + S
Sbjct: 35 ERGGSYGDGILEKGGENPDVVSKPDEENIGETVFEKDNTDSHDDDIRNTDRSKAGEGHGS 94
Query: 395 GEDSDKPATSQAQGGEGDANIAIDVDKTDAKSVNXXXXXXXGQDKEASSDKVDDWTMVNK 454
D + A S + G + + + +K+DA+S N G+D D T++ +
Sbjct: 95 SADGNTEANSNDEDGTTNHS---EGEKSDAES-NSSDAESKGEDHSTGDDMPQSNTVLEE 150
Query: 455 DLMDSSANEH 464
+++ H
Sbjct: 151 SSAETNRMPH 160
>05_04_0407 - 21040536-21041352,21041452-21042044
Length = 469
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 298 KASEAASLNRNPSQQTPQSQNASQKCPPNTTATAPLFDNG 337
+A EA + RN ++ P ASQ+C P T +AP F G
Sbjct: 162 RAGEALAAWRNRAKSIPLLPPASQECHP-TATSAPEFSTG 200
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.5 bits (63), Expect = 8.2
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 127 CNVCNSPVV-GFRYKCAICHDYDLCSKCEA 155
C C+ P+V G + C C ++ LC +C A
Sbjct: 950 CKHCHHPIVSGSSWVCTSCKNFFLCERCYA 979
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,234,077
Number of Sequences: 37544
Number of extensions: 640741
Number of successful extensions: 1660
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1633
Number of HSP's gapped (non-prelim): 66
length of query: 612
length of database: 14,793,348
effective HSP length: 86
effective length of query: 526
effective length of database: 11,564,564
effective search space: 6082960664
effective search space used: 6082960664
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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