GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002620-TA|BGIBMGA002620-PA|IPR000433|Zinc finger,
ZZ-type
         (612 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           28   0.83 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   2.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   3.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   7.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   7.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   7.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.9 bits (59), Expect = 0.83
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 279 STSQEVPHPQNT---DQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTAT 330
           S+++  P  QN    D+AS    ++ AA++  NP Q +P    A+   P  TT+T
Sbjct: 907 SSARSTPKKQNLKFIDEASTPSTSAMAATIVPNPVQASPSP--ATAPAPAKTTST 959


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 366  IIRTKYIEPHNNAKLQNPSTSA-NDQPQASGEDSDKPATSQ 405
            I+ T Y++P   A LQN + S+   QP +  E + + AT+Q
Sbjct: 1429 ILTTTYLKP-TLAALQNEAKSSYQQQPDSGTEQAPREATAQ 1468


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 150  CSKCEAAGNHNEHCMVRLPTPDMSRT-LIKAAIKRS--RHIFKSVATHVDQCPYKK---N 203
            C++C       EH M   P  D +RT L+   +  +   H+ +S     + C   K   +
Sbjct: 1016 CTRCPGVAESAEHAMFECPRFDSTRTELLHGVVPETLLEHMLQSPENWSNVCEATKRITS 1075

Query: 204  RRERSGDAKRRE 215
              ++  D  RRE
Sbjct: 1076 ALQQDWDETRRE 1087


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 275 SEYQSTSQEVP-HPQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTA-TAP 332
           S   S++  +P HP +TD    T  ++ A S        +P S +++   P  T++ T  
Sbjct: 240 SNGSSSATPLPLHPYHTDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTSSPTGS 299

Query: 333 LFD 335
           ++D
Sbjct: 300 VYD 302


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 275 SEYQSTSQEVP-HPQNTDQASETPKASEAASLNRNPSQQTPQSQNASQKCPPNTTA-TAP 332
           S   S++  +P HP +TD    T  ++ A S        +P S +++   P  T++ T  
Sbjct: 240 SNGSSSATPLPLHPYHTDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTSSPTGS 299

Query: 333 LFD 335
           ++D
Sbjct: 300 VYD 302


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 14/54 (25%), Positives = 23/54 (42%)

Query: 263 TEHXXXXXXXXXSEYQSTSQEVPHPQNTDQASETPKASEAASLNRNPSQQTPQS 316
           TEH          + Q+  Q+  HP +  Q S+   +S+    +R+ S    QS
Sbjct: 236 TEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPSRSASIDLMQS 289


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,511
Number of Sequences: 2123
Number of extensions: 23040
Number of successful extensions: 50
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 7
length of query: 612
length of database: 516,269
effective HSP length: 68
effective length of query: 544
effective length of database: 371,905
effective search space: 202316320
effective search space used: 202316320
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)