Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002619-TA|BGIBMGA002619-PA|undefined
         (155 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.46 
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   1.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   1.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   5.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   5.7  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   7.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.5  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 48  ILEKITEIKDNESERIRKSG 67
           ILE I+ +KD+ +E I KSG
Sbjct: 183 ILESISYVKDDGTEGIAKSG 202


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 86  EELEKDYLETQKVCQKQIKSNQELRKREW-DKFIDDMNFKC 125
           EEL+K     +KVC K+  + +EL   ++  +F  D    C
Sbjct: 4   EELKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQDERLMC 44


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 67  GHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQEL-RKREWDKFIDDMNFKC 125
           G+N LP +   L+++L+     +K   E +K     +     + R+ E++    D  F  
Sbjct: 423 GYNGLPTVMSGLDESLSDVTPRKKYPFELEKALHNVMFIQHHIQRQDEFNAEDQDWGFVA 482

Query: 126 QRIDNAF 132
             +D  F
Sbjct: 483 MVLDRLF 489


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
          determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 35 EKRGDREVENLFKILEKITEIKDNESERIR 64
          E R DR  E L    EK+ E + N     R
Sbjct: 11 EYRKDRRYEKLHNEKEKLLEERTNRKRNSR 40


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
          determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 35 EKRGDREVENLFKILEKITEIKDNESERIR 64
          E R DR  E L    EK+ E + N     R
Sbjct: 11 EYRKDRRYEKLHNEKEKLLEERTNRKRNSR 40


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 86  EELEKDYLETQKVCQKQIKSNQEL 109
           +EL+      Q VC K+I + Q++
Sbjct: 20  DELKSGLHTVQSVCMKEIGTAQQI 43


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 34  EEKRGDREVENLFKILEKITEIKDNES 60
           E    DR  +    ++E IT++KD  +
Sbjct: 485 ENDHADRVCDMALDMVEAITDLKDRST 511


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.135    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,770
Number of Sequences: 429
Number of extensions: 2323
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 155
length of database: 140,377
effective HSP length: 53
effective length of query: 102
effective length of database: 117,640
effective search space: 11999280
effective search space used: 11999280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)