GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002619-TA|BGIBMGA002619-PA|undefined
         (155 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    31   0.017
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    29   0.088
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   0.27 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   0.47 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   1.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   3.3  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         23   5.8  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         23   5.8  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         23   5.8  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         23   5.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 31.1 bits (67), Expect = 0.017
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 36   KRGDREVENLFKILEKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLET 95
            +   R  E    ++  I     N  + ++++   AL   S   E A    +  +  Y E 
Sbjct: 1392 EESSRRAEEALNLVPNIERQIVNSRDLLQRA-EEALYAASRNAEDARKNAQTAQDKYAEE 1450

Query: 96   QKVCQKQIKSNQELRK---REWDKFIDDMNFKCQRIDNAFEEKEEELR---DLYADLKHK 149
                 + IK      K   R+     D +N +  + DN  EE+E ++R   +L  + K K
Sbjct: 1451 ASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEEREAQIRKDLNLTNEAKEK 1510

Query: 150  LNIADI 155
            +  A +
Sbjct: 1511 VGQAQL 1516



 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 69   NALPVLSEKLEQALNLCEELEKDYLETQKVCQK 101
            N +   S + E+ALNL   +E+  + ++ + Q+
Sbjct: 1389 NQVEESSRRAEEALNLVPNIERQIVNSRDLLQR 1421


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.7 bits (61), Expect = 0.088
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 94  ETQKVCQKQIKSNQEL-----RKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKH 148
           E +++ + QI   QEL     RK E D+ + +   +  ++     +KE+E+R++ A++  
Sbjct: 244 EAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEMSK 303

Query: 149 K 149
           +
Sbjct: 304 R 304


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.1 bits (57), Expect = 0.27
 Identities = 9/23 (39%), Positives = 19/23 (82%)

Query: 39   DREVENLFKILEKITEIKDNESE 61
            +R++ NLF+ + K++E+ +NE+E
Sbjct: 1088 NRDLINLFRQMPKVSELSENETE 1110


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.2 bits (55), Expect = 0.47
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 44  NLFKILEKIT--EIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQK 101
           +LF+ L  +T  +++DN   R+  +  +ALP L   LE + N  EEL+   L      + 
Sbjct: 177 DLFEHLPNLTWLDMRDNIF-RLPATIFDALPKL-RVLELSFNSLEELDPRLLRHLPNLRL 234

Query: 102 QIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIA 153
               + +LR      F        +R+D +  + E    DL+ADL H   +A
Sbjct: 235 LTLWHNKLRTLSRAAFAGVPEL--ERLDLSSNQLESVPGDLFADLPHLTELA 284


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 73  VLSEKLEQALNLCEELEKDYLETQKVCQ 100
           V+ E++E  L    +  + Y+E QKVC+
Sbjct: 198 VIREEIEPKLEKLRKEREHYIEFQKVCR 225



 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 127 RIDNAFEEKEEELRDLYADL 146
           RI    +EKE ELRD+ A++
Sbjct: 681 RIQAMLQEKEAELRDISAEV 700


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 35   EKRGDREVENLFKILEKITEIKDNESERIRKSGHN 69
            EK  DRE ++L+K+  K TE   N +  +  + H+
Sbjct: 1455 EKELDREKKSLYKLHIKATEECTNANLSLDTTSHS 1489


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 69  NALPVLSEKLEQALNLCEELEKDYLETQKVCQK 101
           N +   S + E+ALNL   +E+  + ++ + Q+
Sbjct: 250 NQVEESSRRAEEALNLVPNIERQIVNSRDLLQR 282


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 69  NALPVLSEKLEQALNLCEELEKDYLETQKVCQK 101
           N +   S + E+ALNL   +E+  + ++ + Q+
Sbjct: 250 NQVEESSRRAEEALNLVPNIERQIVNSRDLLQR 282


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 69  NALPVLSEKLEQALNLCEELEKDYLETQKVCQK 101
           N +   S + E+ALNL   +E+  + ++ + Q+
Sbjct: 250 NQVEESSRRAEEALNLVPNIERQIVNSRDLLQR 282


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 69  NALPVLSEKLEQALNLCEELEKDYLETQKVCQK 101
           N +   S + E+ALNL   +E+  + ++ + Q+
Sbjct: 250 NQVEESSRRAEEALNLVPNIERQIVNSRDLLQR 282


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.135    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,634
Number of Sequences: 2123
Number of extensions: 6117
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 14
length of query: 155
length of database: 516,269
effective HSP length: 59
effective length of query: 96
effective length of database: 391,012
effective search space: 37537152
effective search space used: 37537152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)