Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002617-TA|BGIBMGA002617-PA|IPR001611|Leucine-rich
repeat, IPR003591|Leucine-rich repeat, typical subtype
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 73 2e-13
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 56 1e-08
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 55 4e-08
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 54 7e-08
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 48 6e-06
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 44 6e-05
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 43 1e-04
SPAC664.07c |rad9||checkpoint clamp complex protein Rad9|Schizos... 32 0.25
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 31 0.78
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac... 30 1.0
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 29 1.8
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 29 1.8
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 29 1.8
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 29 1.8
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 29 1.8
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 28 4.1
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 28 5.5
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 28 5.5
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 27 7.2
SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p... 27 9.6
SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces pom... 27 9.6
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 27 9.6
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 27 9.6
SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 27 9.6
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 72.5 bits (170), Expect = 2e-13
Identities = 106/441 (24%), Positives = 184/441 (41%), Gaps = 31/441 (7%)
Query: 66 KLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSRNYFDSWL 125
+LNI+NN+ P S L NL LD+S N P + L+ LE LN S N
Sbjct: 506 ELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFP-LIITELSQLETLNFSHNLLSQIS 564
Query: 126 NLNPNDVLLPATHLKILDLSFNKFQTMGNLANQE---LLIRPSLETLILDHC-EINSIHG 181
+ + V L +L+ DLS Q +G L N E L L C ++NSI+
Sbjct: 565 SKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIASLSECPKLNSINV 624
Query: 182 RSPLSGLI-----NIRVLKLNFNPLLRIQNLIS-SSLRSLFVSNCELTSLNHNELMFLPS 235
L + + +F PL I S S+L +S+ +L L + + L +
Sbjct: 625 ACNLLSFYEYSNPSATFIDFSFCPLTTIDPAFSYSNLVYFDISHAKLIGLKDSVIETLVN 684
Query: 236 LTHLKMSNNYRLELASSANNLFSQSLKYIDISYCNI--LQPNLKGFPSLRKAILNHNMVR 293
+ +K++ N+ ++ + + + Q+LKY+ + C + + PNL L L+ N ++
Sbjct: 685 VETVKVNYNHFTSISDAISAM--QNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIK 742
Query: 294 YLESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLD-------LSWNEIAVIPED 346
+ + L+ ++LS+N + ++ K+ + + LS N ++ +
Sbjct: 743 IFPEEVW-QVSSLKVVNLSSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQ 801
Query: 347 SLLEMPSLTQLKLSRNYLSR---VGHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELD 403
+ MP++ +L L N L + +L++S L I + + L
Sbjct: 802 EFV-MPTVEELYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLF 860
Query: 404 LSQNLLSYIPDSISSNT-LKYLNLNYNRISSI-NNLTFFMLNRLTSLSV--VGNRFTMIW 459
+S N L+ + S ++ L+ L N NR+SS N R +S + N
Sbjct: 861 VSGNELANLSISSTAQVLLETLYANGNRLSSFPKNEALSKSLRFLDISTNNLQNLAVEKA 920
Query: 460 RRSFFDSNPYLERLDLSDNMW 480
+ P LE L+LS N W
Sbjct: 921 EKKSLTKLPQLEYLNLSGNTW 941
Score = 63.7 bits (148), Expect = 9e-11
Identities = 130/472 (27%), Positives = 204/472 (43%), Gaps = 79/472 (16%)
Query: 45 DIDCSRRGLTDIPNGL---GLQVTKLNISNNEFTKFP-ESLSRLHNLVNLDISSNQLKGL 100
++D SR L IP + ++ LN+S+N P + + R L LDIS+N L+
Sbjct: 409 NLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNN-LRSP 467
Query: 101 PDNALYNLTALEVLNLSRN--------YFDSW-------LNLNPNDV-LLP-----ATHL 139
+ L LEVLN+SRN F LN+ N + LP +L
Sbjct: 468 RGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNL 527
Query: 140 KILDLSFNKFQTMGNLANQELLIRPSLETLILDHCEINSIHGRSPLSGLINIRVLKLNFN 199
LDLS+N F T L EL LETL H ++ I S + L+ ++ L L FN
Sbjct: 528 TYLDLSYNNFVTF-PLIITEL---SQLETLNFSHNLLSQI--SSKIGSLVKLKHLYLQFN 581
Query: 200 PLLRIQNLISSSLRSLFVSNCELTSLNHNELMFLPSLTHLKMSNNYRLEL-ASSANNLFS 258
L N + + L N E L++N + + SL+ N+ + S +
Sbjct: 582 DL---SNRLPQEIGLL--KNLETIDLSYNAITNIASLSECPKLNSINVACNLLSFYEYSN 636
Query: 259 QSLKYIDISYCNI--LQP-----NLKGF-----------PSLRKAILNHNMVR--YLE-- 296
S +ID S+C + + P NL F S+ + ++N V+ Y
Sbjct: 637 PSATFIDFSFCPLTTIDPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFT 696
Query: 297 --SNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPSL 354
S+A + L+YL +N ++ + + + LK L HLDL N I + PE+ + ++ SL
Sbjct: 697 SISDAISAMQNLKYLSCTNCEMSYVSPNLGK-LKHLVHLDLHANNIKIFPEE-VWQVSSL 754
Query: 355 TQLKLSRNYLSR----VGHLRSMSVTILD---MSSCELNTIGKDSLEG--LQSIVELDLS 405
+ LS N L + V + ++ TI M + N + S + + ++ EL L
Sbjct: 755 KVVNLSSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLV 814
Query: 406 QNLLSYIPDSISS----NTLKYLNLNYNRISSINNLTFFMLNRLTSLSVVGN 453
N L D ++ LK LNL+YN ++ I + F + L L V GN
Sbjct: 815 DNRLG--NDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGN 864
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 56.4 bits (130), Expect = 1e-08
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 20/262 (7%)
Query: 276 LKGFPSLRKAILNHNMVRYLESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDL 335
L+ F +L+ L N ++ +ES L LDL +N I +R + +K L +LDL
Sbjct: 58 LERFKNLQSLCLRQNQIKKIESVP----ETLTELDLYDNLI--VRIENLDNVKNLTYLDL 111
Query: 336 SWNEIAVIPEDSLLEMPSLTQLKLSRNYLSRVGHLRSMS-VTILDMSSCELNTIGKDSLE 394
S+N I I ++ + L L +N + R+ +L + +T L++ ++ I ++L+
Sbjct: 112 SFNNIKTIR--NINHLKGLENLFFVQNRIRRIENLEGLDRLTNLELGGNKIRVI--ENLD 167
Query: 395 GLQSIVELDLSQNLLSYIPDSISSNTLKYLNLNYNRISSINNLTFFMLNRLTSLSVVGNR 454
L ++ +L + +N ++ + L L++ NRI+ NL + + L L V N
Sbjct: 168 TLVNLEKLWVGKNKITKFENFEKLQKLSLLSIQSNRITQFENLAC-LSHCLRELYVSHNG 226
Query: 455 FTMIWRRSFFDSNPYLERLDLSDNMWRCDCSDENMRDFYDFVTLEPNKKEESFNLICNSP 514
T S + LE LD+S+NM + +++ + N + SF I +
Sbjct: 227 LTSF---SGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWA--SNNELSSFQEIEDEL 281
Query: 515 ANVNTQTWLEACYFTWNPTEKT 536
+ + LE YF NP +KT
Sbjct: 282 SGLKK---LETVYFEGNPLQKT 300
Score = 44.4 bits (100), Expect = 6e-05
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 81 LSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSRNYFDSWLNLNPNDVLLPATHLK 140
L R NL +L + NQ+K + ++ LT L++ +D+ + N L +L
Sbjct: 58 LERFKNLQSLCLRQNQIKKI-ESVPETLTELDL-------YDNLIVRIEN--LDNVKNLT 107
Query: 141 ILDLSFNKFQTMGNLANQELLIRPSLETLILDHCEINSIHGRSPLSGLINIRVLKLNFNP 200
LDLSFN +T+ N+ + + LE L I I L GL + L+L N
Sbjct: 108 YLDLSFNNIKTIRNINHLK-----GLENLFFVQNRIRRIEN---LEGLDRLTNLELGGNK 159
Query: 201 LLRIQNLIS-SSLRSLFVSNCELTSLNHNELMFLPSLTHLKMSNNYRLELASSANNLFSQ 259
+ I+NL + +L L+V ++T + E L L+ L + +N + + A S
Sbjct: 160 IRVIENLDTLVNLEKLWVGKNKITKFENFEK--LQKLSLLSIQSNRITQFENLA--CLSH 215
Query: 260 SLKYIDISYCNILQ-PNLKGFPSLRKAILNHNMVRYLESNAFANNTELEYLDLSNNNIAS 318
L+ + +S+ + ++ +L +++NM+++L A N L L SNN ++S
Sbjct: 216 CLRELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKN--LVELWASNNELSS 273
Query: 319 LR--YDTFRGLKMLKHLDLSWNEI 340
+ D GLK L+ + N +
Sbjct: 274 FQEIEDELSGLKKLETVYFEGNPL 297
Score = 37.9 bits (84), Expect = 0.005
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 333 LDLSWNEIAVIPEDSLLEMPSLTQLKLSRNYLSRVGHLRSMSVTILDMSSCELNTIGKDS 392
++L + I + L +L L L +N + ++ S+ T+ ++ + + ++
Sbjct: 43 VELIQSRIQSMASLGLERFKNLQSLCLRQNQIKKI---ESVPETLTELDLYDNLIVRIEN 99
Query: 393 LEGLQSIVELDLSQNLLSYIPDSISSNTLKYLNLNYNRISSINNLTFFMLNRLTSLSVVG 452
L+ ++++ LDLS N + I + L+ L NRI I NL L+RLT+L + G
Sbjct: 100 LDNVKNLTYLDLSFNNIKTIRNINHLKGLENLFFVQNRIRRIENLE--GLDRLTNLELGG 157
Query: 453 NRFTMIWRRSFFDSNPYLERLDLSDNMWRCDCSDENMRDFYDFVTLEPNKKEESFNLICN 512
N+ +I D+ LE+L + N + E ++ ++++ N+ + NL C
Sbjct: 158 NKIRVI---ENLDTLVNLEKLWVGKNKITKFENFEKLQKL-SLLSIQSNRITQFENLACL 213
Query: 513 S 513
S
Sbjct: 214 S 214
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 54.8 bits (126), Expect = 4e-08
Identities = 91/337 (27%), Positives = 146/337 (43%), Gaps = 34/337 (10%)
Query: 59 GLGLQVTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSR 118
G + + LN N + S S L NL LDIS NQL+ L L +L L L +
Sbjct: 643 GCPVTIRDLNAVENRLSSLT-SFSNLLNLQYLDISYNQLEDL--TGLSSLIHLRELKVDS 699
Query: 119 NYFDSWLNLNPNDVL--LPATHLKILDLSFNKFQTMGNLANQELLIRPSLETLILDHCEI 176
N+ S + D L L A + +I +LSF T NL LE L+L + EI
Sbjct: 700 NHLWSLDGIQHLDGLLKLSACNNRIKELSF----TNSNLHR--------LEELLLGNNEI 747
Query: 177 NSIHGRSPLSGLINIRVLKLNFNPLLRIQ-NLISSSLRSLFVSNCELTSLNHNELMFLPS 235
I +S L N+ VL+L+ N L ++ + LR L +SN + L ++ L +
Sbjct: 748 EEI---EEISSLQNLMVLQLDNNKLTNLKASQPMIHLRILRISNNAIHQLEVDQFPHLRT 804
Query: 236 LTHLKMSNNYRLELASSANNLFSQSLKYIDISYCN-ILQPNLKGFPSLRKAILNHNMVRY 294
L ++ ++ R L + S + D N ++QP+L +R L++N
Sbjct: 805 L-YMDLNRFNRPPDIRRLKRLVNFSFRTQDPEASNFVIQPSL----DIRNLYLSNNTFVT 859
Query: 295 LESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPSL 354
L+ + YL+L+N + + + L+ LDLS N I+ I L+M
Sbjct: 860 LDCKHMF--LGVRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDIESLKPLQMIHR 917
Query: 355 -----TQLKLSRNYLSRVGHLRSMSVTILDMSSCELN 386
++K RN + +L+ ++V L M+ N
Sbjct: 918 LYLVGNRIKKMRNLCDILANLKQLNVLDLRMNPLNFN 954
Score = 50.8 bits (116), Expect = 7e-07
Identities = 89/356 (25%), Positives = 148/356 (41%), Gaps = 31/356 (8%)
Query: 114 LNLSRNYFDSWLNLNP-----NDVLLPATHLKILDLSFNKFQTMGNLANQELLIRPSLET 168
L++SR + DS + L+ ++ L + L + + + N+ +
Sbjct: 608 LDISRRHLDSLIGLSELCPSIEELTLEGNEIAYLTGCPVTIRDLNAVENRLSSLTSFSNL 667
Query: 169 LILDHCEI--NSIHGRSPLSGLINIRVLKLNFNPLLRIQNLIS-SSLRSLFVSNCELTSL 225
L L + +I N + + LS LI++R LK++ N L + + L L N + L
Sbjct: 668 LNLQYLDISYNQLEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLSACNNRIKEL 727
Query: 226 NHNELMFLPSLTHLKMSNNY--RLELASSANNLFSQSLKYIDISYCNILQPNLKGFPSLR 283
+ L L L + NN +E SS NL L ++ QP + LR
Sbjct: 728 SFTNSN-LHRLEELLLGNNEIEEIEEISSLQNLMVLQLDNNKLTNLKASQPMIH----LR 782
Query: 284 KAILNHNMVRYLESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVI 343
+++N + LE + F + L Y+DL+ N R R LK L + +
Sbjct: 783 ILRISNNAIHQLEVDQFPHLRTL-YMDLNRFN----RPPDIRRLKRLVNFSFRTQD---- 833
Query: 344 PEDS-LLEMPSLT--QLKLSRNYLSRVG--HLRSMSVTILDMSSCELNTIGKDSLEGLQS 398
PE S + PSL L LS N + H+ + V L++++ +L + K + +
Sbjct: 834 PEASNFVIQPSLDIRNLYLSNNTFVTLDCKHM-FLGVRYLELANVQLKEVPKYIATSMPN 892
Query: 399 IVELDLSQNLLSYIPDSISSNTLKYLNLNYNRISSINNLTFFMLNRLTSLSVVGNR 454
+ LDLS N +S I + L L NRI + NL + N L L+V+ R
Sbjct: 893 LRVLDLSHNYISDIESLKPLQMIHRLYLVGNRIKKMRNLCDILAN-LKQLNVLDLR 947
Score = 49.2 bits (112), Expect = 2e-06
Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 31/295 (10%)
Query: 138 HLKILDLSFNKFQTMGNLANQELLIRPSLETLILDHCEINSIHGRSPLSGLI-----NIR 192
+L+ LD+S+N+ + + L++ LI L L +D + S+ G L GL+ N R
Sbjct: 669 NLQYLDISYNQLEDLTGLSS---LIH--LRELKVDSNHLWSLDGIQHLDGLLKLSACNNR 723
Query: 193 VLKLNF--NPLLRIQNLISSSLRSLFVSNCELTSLNHNELMFLPS--LTHLKMSNNY-RL 247
+ +L+F + L R++ L+ + + E++SL + ++ L + LT+LK S L
Sbjct: 724 IKELSFTNSNLHRLEELLLGNNEIEEIE--EISSLQNLMVLQLDNNKLTNLKASQPMIHL 781
Query: 248 ELASSANNLFSQSLKYIDISYCNILQPNLKGF---PSLR--KAILNHNM-VRYLESNAFA 301
+ +NN Q L+ + L +L F P +R K ++N + + E++ F
Sbjct: 782 RILRISNNAIHQ-LEVDQFPHLRTLYMDLNRFNRPPDIRRLKRLVNFSFRTQDPEASNFV 840
Query: 302 NNTELEY--LDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPSLTQLKL 359
L+ L LSNN +L D +++L+L+ ++ +P+ MP+L L L
Sbjct: 841 IQPSLDIRNLYLSNNTFVTL--DCKHMFLGVRYLELANVQLKEVPKYIATSMPNLRVLDL 898
Query: 360 SRNYLSRVGHLRSMS-VTILDMSSCELNTIGK--DSLEGLQSIVELDLSQNLLSY 411
S NY+S + L+ + + L + + + D L L+ + LDL N L++
Sbjct: 899 SHNYISDIESLKPLQMIHRLYLVGNRIKKMRNLCDILANLKQLNVLDLRMNPLNF 953
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 54.0 bits (124), Expect = 7e-08
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 378 LDMSSCELNTIGKDSLEGLQSIVELDLSQNLLSYIPDSISS-NTLKYLNLNYNRISSINN 436
L SSC+L +I K+ LQS+V LDLS N L+ IP ++ L LNL N+I+
Sbjct: 337 LRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRT 396
Query: 437 LTFFMLNRLTSLSVVGNRFTMIWRRSFFDSNPYLERLDLSDN 478
L+ L L + N T + S ++ P LE+LD+ DN
Sbjct: 397 FYHISLSHLQILVLSRNHLTSL---SGLENVPSLEKLDIRDN 435
Score = 47.2 bits (107), Expect = 8e-06
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 304 TELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPSLTQLKLSRNY 363
++L YL S+ + S+ + F L+ L LDLS NE+ IP +L E+P L L L+ N
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPY-ALGELPQLCSLNLASNK 390
Query: 364 LS---RVGHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELDLSQNLLSYIPD--SISS 418
++ H+ + IL +S L ++ LE + S+ +LD+ N ++ + + +
Sbjct: 391 ITGCRTFYHISLSHLQILVLSRNHLTSL--SGLENVPSLEKLDIRDNSITDVVEFRRLVG 448
Query: 419 NT---LKYLNLN-YNRISSINNLTFF 440
NT YL+LN + + S +T F
Sbjct: 449 NTNFEEAYLSLNPFTKTYSSYRITIF 474
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 48 CSRRGLTDIPNG--LGLQ-VTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNA 104
CS L IP L LQ + L++S NE T+ P +L L L +L+++SN++ G
Sbjct: 339 CSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFY 398
Query: 105 LYNLTALEVLNLSRNYFDS 123
+L+ L++L LSRN+ S
Sbjct: 399 HISLSHLQILVLSRNHLTS 417
Score = 33.5 bits (73), Expect = 0.11
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 292 VRYLESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEM 351
++ + N F + L LDLS N + + Y L L L+L+ N+I + +
Sbjct: 344 LKSIPKNVFLSLQSLVSLDLSGNELTEIPY-ALGELPQLCSLNLASNKITGCRTFYHISL 402
Query: 352 PSLTQLKLSRNYLSRVGHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELDLSQNLLSY 411
L L LSRN+L+ + L +V L+ N+I D +E + + + + LS
Sbjct: 403 SHLQILVLSRNHLTSLSGLE--NVPSLEKLDIRDNSI-TDVVEFRRLVGNTNFEEAYLSL 459
Query: 412 IPDSISSNTLKYLNLNYNR 430
P + + ++ + NY R
Sbjct: 460 NPFTKTYSSYRITIFNYFR 478
Score = 31.5 bits (68), Expect = 0.44
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 19/134 (14%)
Query: 13 SWNXXXXXXXXXXXXKTIGDLCFLCRCNLDKTDIDCSRRGLTDIPNGLGL--QVTKLNIS 70
SW+ K+I FL +L +D S LT+IP LG Q+ LN++
Sbjct: 330 SWSQLLYLRCSSCKLKSIPKNVFLSLQSL--VSLDLSGNELTEIPYALGELPQLCSLNLA 387
Query: 71 NNEFTK----FPESLSRLHNLV---NLDISSNQLKGLP--------DNALYNLTALEVLN 115
+N+ T + SLS L LV N S + L+ +P DN++ ++ L
Sbjct: 388 SNKITGCRTFYHISLSHLQILVLSRNHLTSLSGLENVPSLEKLDIRDNSITDVVEFRRLV 447
Query: 116 LSRNYFDSWLNLNP 129
+ N+ +++L+LNP
Sbjct: 448 GNTNFEEAYLSLNP 461
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 412 IPDSISSNTLKYLNLNYNRISSINNLTFFMLNRLTSLSVVGNRFTMI 458
I S S + L YL + ++ SI F L L SL + GN T I
Sbjct: 325 ILSSSSWSQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEI 371
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 67 LNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSRN 119
LNI +N +FPESL RL +L LDIS N++K LP+ + L L+VL++S+N
Sbjct: 80 LNIRSNVLREFPESLCRLESLEILDISRNKIKQLPE-SFGALMNLKVLSISKN 131
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 333 LDLSWNEIAVIPEDSLLEMPS-LTQLKLSRNYLSRVGH--LRSMSVTILDMSSCELNTIG 389
LDLS + +P + L + + +L L N++ +G L+ + L++ S L
Sbjct: 32 LDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREF- 90
Query: 390 KDSLEGLQSIVELDLSQNLLSYIPDSISS-NTLKYLNLNYNRISSINNLTFFMLNRLTSL 448
+SL L+S+ LD+S+N + +P+S + LK L+++ NR+ + M N L L
Sbjct: 91 PESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPN-LEIL 149
Query: 449 SVVGN 453
+ N
Sbjct: 150 KIENN 154
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 67 LNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSRNY 120
L+IS N+ + PES L NL L IS N+L LP + ++ LE+L + N+
Sbjct: 103 LDISRNKIKQLPESFGALMNLKVLSISKNRLFELP-TYIAHMPNLEILKIENNH 155
Score = 33.1 bits (72), Expect = 0.15
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 235 SLTHLKMSNNYRLE-LASSANNLFSQSLKYIDISYCNILQPNLKGFPSLRKAI----LNH 289
S + + N +E + A + ++ +D+S+ N+ + + ++ I L H
Sbjct: 2 SAHEVSSTKNSEIERIIKEAEDAGPENALTLDLSHLNLRELPYEQLERIQGRIARLALGH 61
Query: 290 NMVRYLESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLL 349
N ++ + T L YL++ +N + R L+ L+ LD+S N+I +PE S
Sbjct: 62 NFIKSIGPEIL-KFTRLRYLNIRSNVLREFPESLCR-LESLEILDISRNKIKQLPE-SFG 118
Query: 350 EMPSLTQLKLSRNYL 364
+ +L L +S+N L
Sbjct: 119 ALMNLKVLSISKNRL 133
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 44.4 bits (100), Expect = 6e-05
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 233 LPSLTHLKMSNNYRLELASSANNLFSQSLKYIDISYCNILQPNLKG----FPSLRKAILN 288
LPSL +L + +N SS L L + ++ C + +++ FPSL L
Sbjct: 166 LPSLRNLTLDSNLFSNFISSNTVLLIPHLTQLSVNGCGLNSKDVQWITETFPSLEVLYLE 225
Query: 289 HNMVRYLESNAFANNTELEYLDLSNN-NIAS---LRYDTFRGLKMLKHLDLSWNEIAVIP 344
N + ++ +F N L+ L L+NN N+ S D F+G + +L+LS +A +
Sbjct: 226 ANEIILSKATSFKNLQFLQTLSLANNLNLYSADGYAVDVFQG---INNLNLSSTSLADVA 282
Query: 345 EDSLLEMPSLTQLKLSRNYLSRV---GHLRSM 373
E + + LT L +S N + + HLR++
Sbjct: 283 ELPVHTLHKLTFLDISENNIRDIRSLDHLRTL 314
Score = 34.3 bits (75), Expect = 0.063
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 365 SRVGHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELDLSQNLL-SYIPD-SISSN--T 420
S+ L+S+ V ILD E I + + L +++LDLS+NL + P + S +
Sbjct: 109 SKQRDLKSLRVIILDNYRIEDIEIEYEYSKILPEVIDLDLSRNLFHEFFPILKLCSQLPS 168
Query: 421 LKYLNLNYNRISS-INNLTFFMLNRLTSLSVVG 452
L+ L L+ N S+ I++ T ++ LT LSV G
Sbjct: 169 LRNLTLDSNLFSNFISSNTVLLIPHLTQLSVNG 201
Score = 31.1 bits (67), Expect = 0.59
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 280 PSLRKAILNHNMV-RYLESNAFANNTELEYLDLS----NNNIASLRYDTFRGLKMLKHLD 334
PSLR L+ N+ ++ SN L L ++ N+ +TF L++L
Sbjct: 167 PSLRNLTLDSNLFSNFISSNTVLLIPHLTQLSVNGCGLNSKDVQWITETFPSLEVLY--- 223
Query: 335 LSWNEIAVIPEDSLLEMPSLTQLKLSRNY--LSRVGHLRSM--SVTILDMSSCELNTIGK 390
L NEI + S + L L L+ N S G+ + + L++SS L + +
Sbjct: 224 LEANEIILSKATSFKNLQFLQTLSLANNLNLYSADGYAVDVFQGINNLNLSSTSLADVAE 283
Query: 391 DSLEGLQSIVELDLSQNLLSYIPDSISSNTLKYLNLNYNRIS 432
+ L + LD+S+N + I TL+ NL + RI+
Sbjct: 284 LPVHTLHKLTFLDISENNIRDIRSLDHLRTLE--NLKHLRIT 323
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 54 TDIPNGLGLQVTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEV 113
T N LQ L + N ++ ++ + NL++SS L + + ++ L L
Sbjct: 235 TSFKNLQFLQTLSLANNLNLYSADGYAVDVFQGINNLNLSSTSLADVAELPVHTLHKLTF 294
Query: 114 LNLSRNYFDSWLNLNPNDVLLPATHLKILDLSFNK 148
L++S N +L+ L HL+I FNK
Sbjct: 295 LDISENNIRDIRSLDHLRTLENLKHLRITLSYFNK 329
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 42 DKTDIDCSRRGLTDIPNGLGLQ--VTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKG 99
D T +D GL ++ L +T+L I++N T+ P + +L NLV LD S N +K
Sbjct: 159 DWTCLDLGGIGLRNVSTDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKT 218
Query: 100 LPDNALYNLTALEVLNLSRNYFDSWLNLNPNDVLLPATHLKILDLSFNKFQ 150
+P L LT L + L FD+ +++ P + L LKIL + N Q
Sbjct: 219 IPPE-LGLLTELREVLL----FDNMISVIPAE-LGTLFQLKILGIEGNPLQ 263
>SPAC664.07c |rad9||checkpoint clamp complex protein
Rad9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/73 (24%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 62 LQVTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSRNYF 121
++ T N++ + + +LSR+ + VN +I+ NQ++ N+ + + ++ L + +F
Sbjct: 1 MEFTVSNVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNS--SRSGFSMVTLKKAFF 58
Query: 122 DSWLNLNPNDVLL 134
D ++ P+ VLL
Sbjct: 59 DKYI-FQPDSVLL 70
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 55 DIPNGLGLQVTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEV 113
++PNG + +LNI + FT P + R N+VN D ++ +AL T +++
Sbjct: 330 ELPNGF-IDTHELNILSRSFTASPNQILRESNMVNQDSFTDNPVDATWDALIGTTQIDL 387
>SPBC216.01c ||SPBC713.13c|DNA damage response protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 836
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 417 SSNTLKYLNLNYN-RISSINNLTFF--MLNRLTSLS 449
S +TL YLN NY ++ S+NNL+ F +LN + LS
Sbjct: 655 SEDTLDYLNKNYRPQLESLNNLSTFSELLNIIDGLS 690
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 195 KLNFNPLLRIQNLISSSLRSLFVSNCELTSLNHNELMFLPSLTHLKMSNNYRLELASSAN 254
+ N N + N + +S+ +C S + N L L SL ++ + +L S
Sbjct: 344 RANLNKTMVSINKSINIHQSIHEISCPHHSSSDNCLFILISLMD-RLHSPVLKQLDVSLQ 402
Query: 255 NLFSQSLKYIDISYCNILQPNLKG 278
+L +++YID++Y ++ NL+G
Sbjct: 403 SLTMTAIRYIDLNYVDVQYTNLRG 426
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 309 LDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPSLTQLKLSRNYLSRVG 368
+D ++N+I L F +K L+ L N I I D +P+L L L++N+L +
Sbjct: 46 IDFTDNDIRYL--GNFPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIA 103
Query: 369 HLRSM-SVTILDMSSCELNTIGK 390
L + S L SC N + +
Sbjct: 104 DLDPLASCPQLTNLSCIDNPVAQ 126
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 211 SLRSLFVSNCELTSLNHNELMFLPSLTHLKMSNNYRLELASSAN-NLFSQSL 261
SLR ++S+ NH +L +LP LT ++S NY L + + N F Q L
Sbjct: 396 SLRKSWLSHFSNLLFNHGQLKYLPVLTRDEIS-NYLLNIQAHPNYQTFHQML 446
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 171 LDHCEINSIHGRSPLSGLINIRVLKLNFNPLLRIQNL 207
L E+N G P S L N+ LN NP LR NL
Sbjct: 17 LPSIEVNGERGNVPTSVLCNVEGSLLNSNPALRQPNL 53
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 296 ESNAFANN--TELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPS 353
ESNAF NN ELE L+ N+ I D+ + ++ L + +++
Sbjct: 491 ESNAFINNQCLELEALNRKNDLIRG-ELDSLKEKNLVAQKQLKSANNTLHVRAKHIQILE 549
Query: 354 LTQLKLSRNYLSRVGHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELDLSQNLLSYIP 413
T L +N + R + ++D+++ ++ K ++ L + +L L Y
Sbjct: 550 NTNQSLKKNLENGRAEFRLKEIALIDLANQQIKNQDK-TIHDLNT----ELCSLTLDYCN 604
Query: 414 DSISSNTLKYLNLNY 428
++ +TL++ L Y
Sbjct: 605 TAVERDTLRFRALEY 619
Score = 28.3 bits (60), Expect = 4.1
Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 216 FVSN-C-ELTSLNHNELMFLPSLTHLKMSNNYRLELASSANNLFSQSLKYIDI--SYCNI 271
F++N C EL +LN + L LK N + SANN K+I I +
Sbjct: 495 FINNQCLELEALNRKNDLIRGELDSLKEKNLVAQKQLKSANNTLHVRAKHIQILENTNQS 554
Query: 272 LQPNLK-GFPSLR-KAI----LNHNMVRYLESNAFANNTELEYLDLSNNNIASLRYDT-- 323
L+ NL+ G R K I L + ++ + NTEL L L N A R DT
Sbjct: 555 LKKNLENGRAEFRLKEIALIDLANQQIKNQDKTIHDLNTELCSLTLDYCNTAVER-DTLR 613
Query: 324 FRGLKMLKH 332
FR L+ L H
Sbjct: 614 FRALEYLDH 622
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 72 NEFTKFPESLSRLHN---LVNLDISSNQLKGLPDNALYNLTALEVLNLSRNYFDSWL 125
+E+ +S S L N L NL+I SN G + L++L V + F +WL
Sbjct: 655 DEYDASQQSTSLLMNGQTLKNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWL 711
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 5.5
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 167 ETLILDHCEINSIHGRSPLSGLINIRVLKLNFNPLLRIQNLISSSLRSLFVS-NCELTSL 225
+++++D ++ +I G S L + +V + + ++ L S +++ +S N + S+
Sbjct: 140 DSVVIDDTQLQAIDGIS-LDSVTTFQVTNNRYIQEITMEGL--ESAQNIQISANSKGVSV 196
Query: 226 NHNELMFLPSLTHLKMSNNYRLELASSANNLF--SQSLKYIDISYCNILQPNLKGFPSLR 283
N ++L + + T +SN + L S+A NL+ + +L I + Y + + S
Sbjct: 197 NFSKLSNVTTATFDGISNVFIGNLKSAAGNLYFSNTTLDNISVPYLTEIGQSFAVLYSPE 256
Query: 284 KAILNHNMVRYLESNAFANNTELEYLD 310
LN + + N+T L +D
Sbjct: 257 LTSLNFPNLTTVGGGFVINDTGLTSID 283
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 352 PSLTQLKLSRNYLSRVGHLRSMSVTILDMSSCELNTIGKDSLEGLQSI 399
P L + LSRN + GHL+ ++V+IL + L D++ L+ I
Sbjct: 310 PRLLLVDLSRNLIVWEGHLKDVAVSILPLKHGFLVVTADDNVFELKRI 357
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 368 GHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELDL-SQNLLSYIPDS 415
G + S IL S ++G+ + GL+S++E DL + LLS DS
Sbjct: 15 GVIASSGCNILGQPSSSAKSVGRAIVGGLESVLEWDLKTGQLLSKWKDS 63
>SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 594 IRAEQEALCNTPDP---RDLIAPPSYDEALSMPKLNV 627
+ AEQE L T D R P SYD + M K+N+
Sbjct: 8 VAAEQETLFTTADKKLMRSTKFPASYDTKVDMKKVNI 44
>SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 101 PDNALYNLTA-LEVLNLSRNYFDSWLNLNPNDVLLPATHLKILDLSFNKFQTMGNLAN 157
P + +TA L VL LS + LN +VL+P T +++ N +GNL++
Sbjct: 389 PVSVQSEMTACLAVLALSDEFKSYLLNFGICNVLIPLTDSMSIEVQGNSAAALGNLSS 446
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 27.1 bits (57), Expect = 9.6
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 40 NLDKTDIDCSRRGLTDIPNGLGLQVTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKG 99
+LD +C GLT + N + + L S+ F E L L + L
Sbjct: 20 DLDSIYAECENAGLTAVVNDV-IDTLLLGTSSC----FDEDC--LEKLFAICSHFADLSS 72
Query: 100 LPDNALYNLTALEVLNLSRNYFDSWLNLNPNDVLLPATHLKILDLSFNKFQTMGNLANQE 159
N +Y+L + + S + ++ N D +P T+L+ ++F + +NQ
Sbjct: 73 SVRNKVYDLLTSNISSESA-ILEDMISANATDFTVPQTNLETTGIAFQLTVNSLSSSNQL 131
Query: 160 LLIRPSLETL 169
+IR S T+
Sbjct: 132 SVIRSSTNTV 141
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 406 QNLLSYIPDSISSNTLKYLNLNYNRISSINNLT 438
+NLLS IP ++SS T N ++ R SI T
Sbjct: 393 ENLLSLIPSAVSSPTKANTNKSHQRSFSIPKAT 425
>SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1284
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 201 LLRIQNLISSSLRSLFVSNCELTSLNHNELMFLPSLTHLKMSNNYRLELASSANNLFSQS 260
++ QN+ SS+ S+ +SNCE T + L+ LT S N ++ +++N +
Sbjct: 978 VMNSQNISESSITSILLSNCEPTGFDRLVLLGNQYLT----SGNQ--DINNTSNGSLFKR 1031
Query: 261 LKYI 264
L+Y+
Sbjct: 1032 LRYL 1035
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,269,155
Number of Sequences: 5004
Number of extensions: 138341
Number of successful extensions: 547
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 472
Number of HSP's gapped (non-prelim): 54
length of query: 753
length of database: 2,362,478
effective HSP length: 78
effective length of query: 675
effective length of database: 1,972,166
effective search space: 1331212050
effective search space used: 1331212050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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