Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002616-TA|BGIBMGA002616-PA|IPR003591|Leucine-rich
repeat, typical subtype, IPR001611|Leucine-rich repeat
(438 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 60 6e-10
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 53 9e-08
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 46 1e-05
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 41 4e-04
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 39 0.001
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 36 0.015
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 31 0.42
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 31 0.42
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 31 0.42
SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 30 0.56
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 30 0.74
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.97
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 1.3
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 1.7
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 29 1.7
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 28 2.2
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 28 3.0
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 3.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.9
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 6.9
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 6.9
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 6.9
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 27 6.9
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 26 9.1
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 9.1
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 26 9.1
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 9.1
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 26 9.1
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 9.1
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 9.1
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 60.1 bits (139), Expect = 6e-10
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 10 LILTNNNFATFPSQLESFSRVQVLDLSGNHLN-VPLPSYIENWXXXXXXXXXXXXYESWL 68
L L NN FP ++ S ++V++LS N L + LP
Sbjct: 734 LDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKLPVATSKKLTRTIS----------- 782
Query: 69 NDGRQYKFRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLR 128
Q K R LS N + ++ F M + L L +NR+ L K L L
Sbjct: 783 ----QLKIMRT-LSGNPVSSLSSQEFV-MPTVEELYLVDNRLGNDCFTALEYFKCLKVLN 836
Query: 129 LSRNYLSELP-KFQSN--SLRSLHLSYCLITNLQVDSLSEMTSLLE-IDLSSNQIESIPD 184
LS NYL+E+P KF N L+ L +S + NL + S +++ LLE + + N++ S P
Sbjct: 837 LSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQV--LLETLYANGNRLSSFPK 894
Query: 185 NFS-SNTLQELDLSYNEIGSLT-----DRTFSSLPHLAVLNLRGN 223
N + S +L+ LD+S N + +L ++ + LP L LNL GN
Sbjct: 895 NEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKLPQLEYLNLSGN 939
Score = 43.6 bits (98), Expect = 6e-05
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 31/221 (14%)
Query: 10 LILTNNNFATFPSQLESFSRVQVLDLSGNHLNVPLPSYIENWXXXXXXXXXXXXYESWLN 69
L L+ NNF TFP + S+++ L+ S N L+ + S I
Sbjct: 530 LDLSYNNFVTFPLIITELSQLETLNFSHNLLS-QISSKI--------------------- 567
Query: 70 DGRQYKFRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRL 129
G K + L L N + N + NL +DLS N I + L+ LN++ +
Sbjct: 568 -GSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIAS--LSECPKLNSINV 624
Query: 130 SRNYLSELPKFQSNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSN 189
+ N LS ++ + S + S+C +T +D ++L+ D+S ++ + D+
Sbjct: 625 ACNLLS-FYEYSNPSATFIDFSFCPLTT--IDPAFSYSNLVYFDISHAKLIGLKDSVIET 681
Query: 190 --TLQELDLSYNEIGSLTDRTFSSLPHLAVLNLRGNEFREV 228
++ + ++YN S++D S++ +L L+ E V
Sbjct: 682 LVNVETVKVNYNHFTSISD-AISAMQNLKYLSCTNCEMSYV 721
Score = 39.5 bits (88), Expect = 0.001
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 79 LDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSELP 138
L++S N ++ D L LD+S N + K +TA + L L +SRN + EL
Sbjct: 434 LNVSHNLSLDLPLDFMERCVKLKRLDISNN-LRSPRGKPITALRQLEVLNMSRNDIYELD 492
Query: 139 K-----FQSNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSS-NTLQ 192
NSL+ L+++ + L S + +L +DLS N + P + + L+
Sbjct: 493 PLIFSGLSRNSLKELNIANNKLFFLP-HSTRYLVNLTYLDLSYNNFVTFPLIITELSQLE 551
Query: 193 ELDLSYNEIGSLTDRTFSSLPHLAVLNLRGNE 224
L+ S+N + ++ + SL L L L+ N+
Sbjct: 552 TLNFSHNLLSQISSK-IGSLVKLKHLYLQFND 582
Score = 37.5 bits (83), Expect = 0.004
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 97 MTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSE--LPKFQSNSLRSLHLSYCL 154
+ +L LDL N I F P+ + SL + LS N L + LP S L +
Sbjct: 728 LKHLVHLDLHANNIKIF-PEEVWQVSSLKVVNLSSNILEKIKLPVATSKKLTRTISQLKI 786
Query: 155 ITNLQ---VDSLSE----MTSLLEIDLSSNQIESIPDNFSS----NTLQELDLSYNEIGS 203
+ L V SLS M ++ E+ L N++ + D F++ L+ L+LSYN +
Sbjct: 787 MRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLGN--DCFTALEYFKCLKVLNLSYNYLTE 844
Query: 204 LTDRTFSSLPHLAVLNLRGNEFREVWSTSHFASNPFLREVHVKGNR 249
+ + F + L L + GNE + +S + L ++ GNR
Sbjct: 845 IPSKFFQNFSDLKHLFVSGNELANLSISS--TAQVLLETLYANGNR 888
Score = 33.5 bits (73), Expect = 0.060
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 68 LNDGRQYKFRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTL 127
+N+ Y RL + I FS LD+S + + K+ A L +L
Sbjct: 375 INEEDNYSVARLVFTTMDIGADVLRKFSEKKITANLDISRSNLEVIPVKIYPYAHELISL 434
Query: 128 RLSRNYLSELP-KFQSNSLRSLHLSYCLITNLQVDSLSEMTSL--LEI-DLSSNQIESIP 183
+S N +LP F ++ L + NL+ +T+L LE+ ++S N I +
Sbjct: 435 NVSHNLSLDLPLDFMERCVKLKRLD--ISNNLRSPRGKPITALRQLEVLNMSRNDIYELD 492
Query: 184 ----DNFSSNTLQELDLSYNEIGSLTDRTFSSLPHLAVLNLRGNEF 225
S N+L+EL+++ N++ L T L +L L+L N F
Sbjct: 493 PLIFSGLSRNSLKELNIANNKLFFLPHST-RYLVNLTYLDLSYNNF 537
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 52.8 bits (121), Expect = 9e-08
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 77 RRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSE 136
R L+ N++ ++ SFS + NL +LD+S N++ + + L++ L L++ N+L
Sbjct: 649 RDLNAVENRLSSLT--SFSNLLNLQYLDISYNQLEDLTG--LSSLIHLRELKVDSNHLWS 704
Query: 137 LPKFQS-NSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELD 195
L Q + L L I L + S + L E+ L +N+IE I + S L L
Sbjct: 705 LDGIQHLDGLLKLSACNNRIKELSFTN-SNLHRLEELLLGNNEIEEIEEISSLQNLMVLQ 763
Query: 196 LSYNEIGSLTDRTFSSLPHLAVLNLRGNEFREVWSTSHFASNPFLREVHVKGNRWN 251
L N++ +L + + HL +L + N ++ F P LR +++ NR+N
Sbjct: 764 LDNNKLTNL--KASQPMIHLRILRISNNAIHQL-EVDQF---PHLRTLYMDLNRFN 813
Score = 31.9 bits (69), Expect = 0.18
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 168 SLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSLTDRTFSSLPHLAVLNLRGNEFRE 227
++ +++ N++ S+ + LQ LD+SYN++ LT SSL HL L + N
Sbjct: 647 TIRDLNAVENRLSSLTSFSNLLNLQYLDISYNQLEDLTG--LSSLIHLRELKVDSN---H 701
Query: 228 VWS 230
+WS
Sbjct: 702 LWS 704
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 46.0 bits (104), Expect = 1e-05
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 89 IEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKS-LNTLRLSRNYLSEL-PKF-QSNSL 145
I+E +G N LDLS + E + L + + L L N++ + P+ + L
Sbjct: 18 IKEAEDAGPENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRL 77
Query: 146 RSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSS-NTLQELDLSYNEIGSL 204
R L++ ++ +SL + SL +D+S N+I+ +P++F + L+ L +S N + L
Sbjct: 78 RYLNIRSNVLREFP-ESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFEL 136
Query: 205 TDRTFSSLPHLAVLNLRGNEFREVWSTSHFASN 237
+ +P+L +L + N V+ H A+N
Sbjct: 137 -PTYIAHMPNLEILKIENNHI--VFPPPHIANN 166
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 79 LDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSELP 138
LD+SRNKIK + E SF + NL L +S+NR+ E P + +L L++ N++ P
Sbjct: 103 LDISRNKIKQLPE-SFGALMNLKVLSISKNRLFEL-PTYIAHMPNLEILKIENNHIVFPP 160
Query: 139 KFQSNS 144
+N+
Sbjct: 161 PHIANN 166
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 8 QVLILTNNNFATFPSQLESFSRVQVLDLSGNHLNVPLPSYIEN 50
+VL ++ N P+ + +++L + NH+ P P N
Sbjct: 124 KVLSISKNRLFELPTYIAHMPNLEILKIENNHIVFPPPHIANN 166
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 40.7 bits (91), Expect = 4e-04
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 75 KFRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYL 134
+ L+L NKI+ IE + + NL L + +N+I +F + L+ L + N +
Sbjct: 149 RLTNLELGGNKIRVIE--NLDTLVNLEKLWVGKNKITKFEN--FEKLQKLSLLSIQSNRI 204
Query: 135 SELPKFQ--SNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQ 192
++ S+ LR L++S+ +T+ + + +L +D+S+N I+ + L
Sbjct: 205 TQFENLACLSHCLRELYVSHNGLTSFS--GIEVLENLEILDVSNNMIKHLSYLAGLKNLV 262
Query: 193 ELDLSYNEIGSL--TDRTFSSLPHLAVLNLRGNEFRE 227
EL S NE+ S + S L L + GN ++
Sbjct: 263 ELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQK 299
Score = 31.9 bits (69), Expect = 0.18
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 91 EDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSELPKFQSNSLRSLHL 150
ED + T L D +I+ L ++ + L ++ + + ++L
Sbjct: 7 EDGIAPETQLIIDDPDVQQIDADEDLLDDVPDDVDCVELIQSRIQSMASLGLERFKNLQ- 65
Query: 151 SYCLITNL--QVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSLTDRT 208
S CL N +++S+ E +L E+DL N I I + + L LDLS+N I ++ R
Sbjct: 66 SLCLRQNQIKKIESVPE--TLTELDLYDNLIVRIENLDNVKNLTYLDLSFNNIKTI--RN 121
Query: 209 FSSLPHLAVLNLRGNEFREV 228
+ L L L N R +
Sbjct: 122 INHLKGLENLFFVQNRIRRI 141
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 39.1 bits (87), Expect = 0.001
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 79 LDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSELP 138
L S K+K+I ++ F + +L LDLS N + E P L L +L L+ N ++
Sbjct: 337 LRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEI-PYALGELPQLCSLNLASNKITGCR 395
Query: 139 KFQSNSLRSLHLSYCLITNL-QVDSLSEMTSLLEIDLSSNQIESIPD--NFSSNT-LQEL 194
F SL L + +L + L + SL ++D+ N I + + NT +E
Sbjct: 396 TFYHISLSHLQILVLSRNHLTSLSGLENVPSLEKLDIRDNSITDVVEFRRLVGNTNFEEA 455
Query: 195 DLSYN 199
LS N
Sbjct: 456 YLSLN 460
Score = 36.3 bits (80), Expect = 0.008
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 143 NSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSS-NTLQELDLSYNEI 201
+ L L S C + ++ + + SL+ +DLS N++ IP L L+L+ N+I
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKI 391
Query: 202 GSLTDRTFSSLPHLAVLNLRGNEFREVWSTSHFASNPFLREVHVKGN 248
SL HL +L L N + S S + P L ++ ++ N
Sbjct: 392 TGCRTFYHISLSHLQILVLSRN---HLTSLSGLENVPSLEKLDIRDN 435
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 35.5 bits (78), Expect = 0.015
Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 43 PLPSYIENWXXXXXXXXXXXXYESWLNDGRQYKFRRLDLSRNKIKNIEEDSFSGMTNLYF 102
PLPS +E +S D + + LD R + IE + + +
Sbjct: 86 PLPSSVEFKSGKQVEFCGFEKIQSKQRDLKSLRVIILDNYRIEDIEIEYEYSKILPEVID 145
Query: 103 LDLSENRINEFSP--KLLTAAKSLNTLRLSRNYLSELPKFQSNSLRSLHLSYCLITNLQV 160
LDLS N +EF P KL + SL L L N S SN T L +
Sbjct: 146 LDLSRNLFHEFFPILKLCSQLPSLRNLTLDSNLFSNF--ISSN------------TVLLI 191
Query: 161 DSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSLTDRTFSSLPHLAVLNL 220
L+++ S+ L+S ++ I + F S L+ L L NEI +F +L L L+L
Sbjct: 192 PHLTQL-SVNGCGLNSKDVQWITETFPS--LEVLYLEANEIILSKATSFKNLQFLQTLSL 248
Query: 221 RGN 223
N
Sbjct: 249 ANN 251
Score = 30.3 bits (65), Expect = 0.56
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 79 LDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEF-SPKLLTAAKSLNTLRLSRNYLSE 136
L+LS + ++ E + L FLD+SEN I + S L ++L LR++ +Y ++
Sbjct: 271 LNLSSTSLADVAELPVHTLHKLTFLDISENNIRDIRSLDHLRTLENLKHLRITLSYFNK 329
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 30.7 bits (66), Expect = 0.42
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 335 AINKPDPPRPETETTIVNLNGTPQSRAESVVMRVPL-RDEDLPPTYDEALLMPRLNSSFH 393
A N P PP P +N S+A +M PL RD +PP +++ P N++ +
Sbjct: 108 ASNGPTPPNPGNGNVGLNNPSYMNSQASPNIMNAPLQRDTSVPPA--PSMVHPHTNTNAN 165
Query: 394 S 394
S
Sbjct: 166 S 166
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 79 LDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSEL 137
+D + N I+ + +F M L L NRI +P + +L TL L++N+L E+
Sbjct: 46 IDFTDNDIRYL--GNFPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEI 102
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 30.7 bits (66), Expect = 0.42
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 76 FRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSL--NTLRLSRNY 133
F + DLS K+ +E ++F+ YF E +E K ++ + N L+ ++
Sbjct: 714 FVKPDLSLEKLPTLEINTFNCPAISYF----ETSFDECFSKFASSDNYIIGNLLKTNQED 769
Query: 134 LSELPKFQSNSLRSLH 149
LS LP F+S +LR L+
Sbjct: 770 LSNLPTFRSQALRVLN 785
>SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1284
Score = 30.3 bits (65), Expect = 0.56
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 64 YESWLNDGRQYKFRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKS 123
Y LN QY RRL + +N KN+ +D+F + N ++ +I + P+ +
Sbjct: 450 YAELLNFSEQY--RRLSI-KNATKNLTKDNFFSLNNFKVTSVAPPQIGQVLPQFVKCQMG 506
Query: 124 LNTLRLSRNYLSELPKFQSNSLRSLHLSYCLI 155
L+ + L +L NS++S L CLI
Sbjct: 507 LSRPGPFHSALRDL----KNSIKSPFL--CLI 532
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 29.9 bits (64), Expect = 0.74
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 362 ESVVMRVPLRD------EDLPPTYDEALLMPRLNSSFHSL-PDFVDDEPSQRSRRSRS 412
E + R+PL D +D P + + S +L PD ++DEPS SR SRS
Sbjct: 210 EVPIFRIPLSDYETDDMDDGTPLQRHVATLNQYQSPIFNLGPDILEDEPSYSSRASRS 267
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.5 bits (63), Expect = 0.97
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 124 LNTLRLSRNYLSELPKFQSNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIP 183
LN L+ R+ L+ L N + SL LS + S++ +TS ++ ++ ++
Sbjct: 136 LNELKQVRSKLAALE--HENGILSLQLSSSNKKDKNTSSVTTLTSEEDVSYFQKKLTNME 193
Query: 184 DNFSSNTLQELDLS 197
NFS+ + DLS
Sbjct: 194 SNFSAKQSEAYDLS 207
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 29.1 bits (62), Expect = 1.3
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLS---RN--- 132
LDL N + N E +F + + + N++NEF P + +S+ + ++ +N
Sbjct: 2928 LDLLNNLLTNSEVSNFFDQNDWAEIKKNLNKLNEFQPLKFDSEESVTEIFMNNVFQNLCV 2987
Query: 133 ----YLSELPKFQSNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSS 188
Y S FQ+NSL L+ C I + S+L+I +N++ + + S
Sbjct: 2988 VFYVYTSADVDFQTNSLSPALLNRCTIDYYH---SWDYHSMLQI---ANEV--LQETISL 3039
Query: 189 NTLQELDLSYNEIGSLTDRTFSSLPHLAVLNLRGN---EFREVWSTSHFASNPFLR 241
N LD + ++ + AV+N + EF+ + TS+F+ F+R
Sbjct: 3040 NA---LDHDNPNLKNIKGSSIYDAVAQAVVNTHTSIVWEFKHLGKTSYFSCLHFIR 3092
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 28.7 bits (61), Expect = 1.7
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 105 LSENRINEFSPKLLTAAKSLNTLRLSRNYLSELPKFQSNSLRSLHL-SYCLITNLQVDSL 163
L N+ + FS T KS+N+ + ++ PK + ++ LH+ + TN S
Sbjct: 1090 LMTNQGSNFSSTDSTPRKSINSSDVESRSKTDGPKSMHDLIKQLHMRKHSSHTNQSTGS- 1148
Query: 164 SEMTSLLEIDLSSNQIES 181
SE L +DL + +E+
Sbjct: 1149 SESDDLFNLDLPISNLET 1166
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 28.7 bits (61), Expect = 1.7
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 89 IEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSE-LPKFQSNSLRS 147
+E SFS ++ + FL + +N FSPK T+ L+ + N+++E + + + R+
Sbjct: 674 LEFQSFSHISRIQFLTKIWDNLNRFSPKEKTSTFYLSNHLV--NFVTETIVQEEEPRRRT 731
Query: 148 LHLSYCLITNLQVDSLSEMTSLLEI--DLSSNQIESIPD---NFSSNTLQELDLSYN 199
L+Y + + L+ SL I L+S+ I + N +S TL +L N
Sbjct: 732 NVLAYFIQVCDYLRELNNFASLFSIISALNSSPIHRLRKTWANLNSKTLASFELLNN 788
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 28.3 bits (60), Expect = 2.2
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 76 FRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLS 135
+R +D N N+E + ++++YF DLS + I E L KS + YL
Sbjct: 486 YRGIDALENVDINLETSIKTYISDIYFADLSLDEIREELDARLPLLKS-----IVERYL- 539
Query: 136 ELPKFQSNSLRSLHLSYCL 154
+ K N+ S+H+S L
Sbjct: 540 -ISKKNDNNNESIHISRLL 557
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 27.9 bits (59), Expect = 3.0
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 124 LNTLRLSRNYLSELPKFQSNSLRSLHLS-YCLITNLQVDSLSEM-TSLLEIDLSSNQIES 181
++ L+L+ Y S+ F + + H S + ++L M T+ LEI+ S N
Sbjct: 216 IHILKLTEKYSSQNVPFDVYAAQIPHHSNLASVLATTYEALINMHTAYLEINQSINLSLL 275
Query: 182 IPDNFSSNTLQELDLSYNEIGSLTDRTFSSLPH 214
P + S+NTL+ +L L +T S H
Sbjct: 276 WPMSVSTNTLENYELQVRPSTILASQTIFSEEH 308
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.9 bits (59), Expect = 3.0
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 109 RINEFSPKLLTAAKSLNTLRLSRNYLSELPKFQSNSLRSLHLSYCLITNLQVDSLSEMTS 168
RI E P + +A +S + + + + + PK +S+SL +L N ++ + S
Sbjct: 3 RIQENDPIIKSADESKESPAETLSSIFKRPKIKSSSLNKAYLGKAGSVNGASNTSTNQIS 62
Query: 169 LLEIDLSS 176
L++D+SS
Sbjct: 63 SLKVDVSS 70
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 162 SLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSLTDRTFSSL 212
S+S +S + SSN + + P FSS++ +S SLT + SSL
Sbjct: 935 SVSTASSYIASSASSNTLSTEPKTFSSSSTLSESISSINTNSLTVKPESSL 985
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 80 DLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSE 136
D RN+ N + S S TN+ + L +NE LL S T++L R+Y +E
Sbjct: 1018 DWRRNRCLNSFKTSASATTNVTDMQL----LNEDDVALLMTGSSDGTIKLYRDYENE 1070
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 105 LSENRINEFSPKLLTAAKSLNTLRLSRNYLSELPKFQSNSLRSLHLSYCLITNLQVDSLS 164
L++N + P SL+ + L +S LP N ++ H S ++T++ +D
Sbjct: 278 LNDNEASSLFPDTPRLNHSLSFVSL----VSSLPPLDQNIMQDYHTSKDILTSIFLDVNF 333
Query: 165 EMTSLLEIDLSSNQIESIP 183
+S LE LS + +P
Sbjct: 334 ADSSALEAKLSDSLDLDVP 352
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 6.9
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 90 EEDSFSGMTNLYFLD------LSENRINEFSPKLLTAAKSLNTLRLSRNYLSELPKFQSN 143
EE +F G +N F + SE+ I E+ LL +LRL +YL+ F N
Sbjct: 226 EERNFRGKSNSAFYNDFIQSFKSEDLIQEYESSLLLEP----SLRLRISYLA---LFLKN 278
Query: 144 SLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYN 199
+L+ ++ NL + + L +++LSS+ ++ S Q + +Y+
Sbjct: 279 TLQFGYIRKKENVNLNLVKTPKYDDLTKMNLSSSTANTLIKGIQSYNFQNYEKAYS 334
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 154 LITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLS 197
L+ N+ S+ S+ S++ ES+ D S+ T+Q+ D+S
Sbjct: 261 LLHNVDTQSIDGFVSVASHFSSASTAESLDDGHSATTIQQGDVS 304
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 158 LQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSL 204
L ++ L S LE+ + + I + TLQ++ LS++++G L
Sbjct: 193 LSINKLGPDYSGLELGIGESIIMKAIGESTGQTLQQIKLSFHKVGDL 239
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 9.1
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 343 RPETETTIVNLNGTPQSRAESVVMRVP-LRDEDLPPTYDEALLMPRLNSSFHSLPDFVDD 401
RP+T TT ++N TP R V P +R T L PR+ ++ + +
Sbjct: 481 RPKTATTTDSVNRTPSQRGRVAVPSTPSVRSASRAMTSPRTPL-PRVKNTQNPSRSISAE 539
Query: 402 EPSQRSRRSR 411
PS S +R
Sbjct: 540 PPSATSTANR 549
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 9.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 147 SLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSLTD 206
SL ++C ITN + E S+ + DLS+ +I F S + ++ SY E S T+
Sbjct: 7 SLVANFCAITNSTPEKAQEYLSVADGDLST----AITLFFESGGVTDVQSSYIEAPSQTE 62
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 26.2 bits (55), Expect = 9.1
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 134 LSELPKFQSNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQE 193
L ++P + + S+HL + + V LS++ + E LS ++++ + + +++ L+
Sbjct: 863 LQDVPDYSLDDCSSIHL----LAFIHV--LSKLI-IKEEQLSFSRLQLL--SRATSRLRT 913
Query: 194 LDLS-YNEIGSLTDRTFSSLPHLAVLNLR 221
+ LS +N G+LT FSS+ + + N+R
Sbjct: 914 MTLSVFNNSGTLTPELFSSVVRIVLKNVR 942
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 143 NSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQEL 194
++L+ L CL+T Q + + LEID S E++P + +Q+L
Sbjct: 680 SALKQLGKKVCLLTGDQKATARRVAQGLEIDFSDVYAEAVPSQ-KAEIIQKL 730
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 250 WNCEGFSVNLWLTYEFLTKEPSKIHD 275
W GFS+N L Y+ L K P HD
Sbjct: 576 WLLNGFSLNGVLKYQSLLKPPVLSHD 601
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 171 EIDLSSNQIESIPDNFSSNTLQE 193
EIDL ++Q++ P NF+ L+E
Sbjct: 319 EIDLKAHQLDEHPHNFTQRELRE 341
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,973,398
Number of Sequences: 5004
Number of extensions: 83444
Number of successful extensions: 283
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 239
Number of HSP's gapped (non-prelim): 51
length of query: 438
length of database: 2,362,478
effective HSP length: 75
effective length of query: 363
effective length of database: 1,987,178
effective search space: 721345614
effective search space used: 721345614
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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