Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002615-TA|BGIBMGA002615-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(666 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 32 0.011
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 32 0.011
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 32 0.011
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 30 0.045
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 29 0.078
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 29 0.14
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 29 0.14
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 29 0.14
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 28 0.24
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 28 0.24
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 27 0.31
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 27 0.31
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 26 0.96
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 26 0.96
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 26 0.96
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 26 0.96
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 25 1.3
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 1.3
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 25 1.3
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 25 1.3
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 25 1.3
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 25 1.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 1.3
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 25 1.3
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 1.3
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 25 1.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 25 1.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 25 1.3
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 25 1.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 1.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 1.7
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 1.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 25 1.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 1.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 1.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 1.7
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 25 1.7
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 25 1.7
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 25 1.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 25 1.7
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 1.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 1.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 8.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 8.9
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 32.3 bits (70), Expect = 0.011
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 618 RLESKNVQFWFKNRRAKCKRLK 639
RL V+ WF+NRRAK KRL+
Sbjct: 153 RLTEPQVKIWFQNRRAKAKRLQ 174
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.011
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L VQ WFKNRRAKC++
Sbjct: 166 LPESRVQVWFKNRRAKCRQ 184
Score = 25.8 bits (54), Expect = 0.96
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 247 QSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDV 306
+++YP R + L ++Q WF + RQQ+QQ + N SR P V
Sbjct: 148 KTRYPDIFMREEVAVKINLPESRVQVWFKNRRAKCRQQLQQ---QQNKSASRTTTSPTKV 204
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.011
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L VQ WFKNRRAKC++
Sbjct: 108 LPESRVQVWFKNRRAKCRQ 126
Score = 22.6 bits (46), Expect = 8.9
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 247 QSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQY 288
+++YP R + L ++Q WF + RQQ +Q+
Sbjct: 90 KTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQKQH 131
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 30.3 bits (65), Expect = 0.045
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 251 PT-QKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNV 309
PT ++ R RT+F +L +L+ FAEN++ + ++ QQ EL L+ +
Sbjct: 224 PTAEEKRPRTAFSGA-QLARLKHEFAENRYLTERRRQQLSAELG----------LNEAQI 272
Query: 310 VYWFKNARAAQKRA 323
WF+N RA K+A
Sbjct: 273 KIWFQNKRAKIKKA 286
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L ++ WF+N+RAK K+
Sbjct: 267 LNEAQIKIWFQNKRAKIKK 285
Score = 23.0 bits (47), Expect = 6.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 398 DEDVGDMNQDDRPESPDAPLSLITTKKNNNNS 429
D DV PESP+ + T + NNN++
Sbjct: 92 DRDVDLFRGSSTPESPEHYYNQKTLQANNNDA 123
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 29.5 bits (63), Expect = 0.078
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 618 RLESKNVQFWFKNRRAKCKR 637
RL K V+ WF+NRR K K+
Sbjct: 155 RLSEKQVKIWFQNRRVKYKK 174
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 28.7 bits (61), Expect = 0.14
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKR 637
KY R+ + RL + ++ WF+NRR K K+
Sbjct: 206 KYLTRRRRIEIAESL-RLTERQIKIWFQNRRMKAKK 240
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 28.7 bits (61), Expect = 0.14
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKR 637
KY R+ + RL + ++ WF+NRR K K+
Sbjct: 206 KYLTRRRRIEIAESL-RLTERQIKIWFQNRRMKAKK 240
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 28.7 bits (61), Expect = 0.14
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKR 637
KY R+ + RL + ++ WF+NRR K K+
Sbjct: 206 KYLTRRRRIEIAESL-RLTERQIKIWFQNRRMKAKK 240
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 27.9 bits (59), Expect = 0.24
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 619 LESKNVQFWFKNRRAKCKRLKMSL 642
L ++ WF+NRR K KR +M++
Sbjct: 110 LPESTIKVWFQNRRMKDKRQRMAI 133
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 27.9 bits (59), Expect = 0.24
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 371 MQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAP 416
+ LS+S G S+ +DN+S+ D D+D DM++ D P P AP
Sbjct: 214 LNLSKSGGGSAGSLEDDDNISDPEDDDDKD-QDMDEGDLP-LPAAP 257
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 27.5 bits (58), Expect = 0.31
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKRLKMS 641
KY R+ + L + ++ WF+NRR K K+ +M+
Sbjct: 111 KYLSRPRRIQIAENL-NLSERQIKIWFQNRRMKHKKEQMN 149
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 27.5 bits (58), Expect = 0.31
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKRLKMS 641
KY R+ + L + ++ WF+NRR K K+ +M+
Sbjct: 102 KYLSRPRRIQIAENL-NLSERQIKIWFQNRRMKHKKEQMN 140
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 25.8 bits (54), Expect = 0.96
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + V+ WF+NRR K KR
Sbjct: 43 LTERQVKVWFQNRRMKHKR 61
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 25.8 bits (54), Expect = 0.96
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 619 LESKNVQFWFKNRRAK 634
L + V+ WF+NRRAK
Sbjct: 195 LSERQVKIWFQNRRAK 210
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.96
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 619 LESKNVQFWFKNRRAKCKRL 638
L V+ WF+NRR+K K++
Sbjct: 160 LTQTQVKIWFQNRRSKYKKM 179
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 25.8 bits (54), Expect = 0.96
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + V+ WF+NRR K KR
Sbjct: 174 LTERQVKVWFQNRRMKHKR 192
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 45 LTERQIKIWFQNRRMKLKK 63
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 272 LSERQIKIWFQNRRMKWKK 290
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 25.4 bits (53), Expect = 1.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 237 DHLHPALQTVQSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQI 285
D L A + ++QYP TR + +L ++Q WF+ + R+QI
Sbjct: 233 DELEKAFE--RTQYPDIYTREELAQRTKLTEARIQVWFSNRRARLRKQI 279
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 618 RLESKNVQFWFKNRRAKCKR 637
+L +Q WF NRRA+ ++
Sbjct: 258 KLTEARIQVWFSNRRARLRK 277
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 262 LTERQIKIWFQNRRMKLKK 280
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 619 LESKNVQFWFKNRRAK 634
L + ++ WF+NRRAK
Sbjct: 196 LSERQIKIWFQNRRAK 211
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 25.4 bits (53), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKR 637
KY R+ Q L + ++ WF+NRR K K+
Sbjct: 108 KYLCRPRRIQMAQNL-NLTERQIKIWFQNRRMKFKK 142
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.4 bits (53), Expect = 1.3
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 395 SDLDEDVGDMNQDDRPESPD---APLSLITTKKNNNNSDELHQESPKPP 440
+D D DV ++++ P S + PL L + + +N D + Q + P
Sbjct: 217 ADSDSDVVNLSKPGTPPSGEPGNGPLDLSVSSRKRSNDDSVSQPPNRKP 265
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 25.4 bits (53), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 602 KYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKR 637
KY R+ Q L + ++ WF+NRR K K+
Sbjct: 128 KYLCRPRRIQMAQNL-NLTERQIKIWFQNRRMKFKK 162
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 272 LSERQIKIWFQNRRMKWKK 290
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 44 LTERQIKIWFQNRRMKLKK 62
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 196 LTERQIKIWFQNRRMKLKK 214
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 255 LTERQIKIWFQNRRMKLKK 273
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 25.0 bits (52), Expect = 1.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 618 RLESKNVQFWFKNRRAKCKR 637
RL V+ WF+N R K KR
Sbjct: 78 RLTPTQVKIWFQNHRYKTKR 97
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 259 LTERQIKIWFQNRRMKWKK 277
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTTSQNLSSPAS 171
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 259 LTERQIKIWFQNRRMKWKK 277
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 25.0 bits (52), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 618 RLESKNVQFWFKNRRAK-CKRLKMSL 642
+L V+ WF+NRR K KR+K L
Sbjct: 291 QLNETQVKIWFQNRRMKQKKRMKEGL 316
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 281 LTERQIKIWFQNRRMKWKK 299
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 259 LTERQIKIWFQNRRMKWKK 277
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 215 LTERQIKIWFQNRRMKWKK 233
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 97 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 127
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 259 LTERQIKIWFQNRRMKWKK 277
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 47 LTERQIKIWFQNRRMKWKK 65
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 25.0 bits (52), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 618 RLESKNVQFWFKNRRAK-CKRLKMSL 642
+L V+ WF+NRR K KR+K L
Sbjct: 80 QLNETQVKIWFQNRRMKQKKRMKEGL 105
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 25.0 bits (52), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 618 RLESKNVQFWFKNRRAK-CKRLKMSL 642
+L V+ WF+NRR K KR+K L
Sbjct: 80 QLNETQVKIWFQNRRMKQKKRMKEGL 105
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 283 LTERQIKIWFQNRRMKWKK 301
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 25.0 bits (52), Expect = 1.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + V+ WF+NRR K K+
Sbjct: 282 LTERQVKIWFQNRRMKNKK 300
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 619 LESKNVQFWFKNRRAKCKR 637
L + ++ WF+NRR K K+
Sbjct: 259 LTERQIKIWFQNRRMKWKK 277
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 365 NSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
+ + SP+ +S SP P + + NLS+ S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.131 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,051
Number of Sequences: 317
Number of extensions: 5935
Number of successful extensions: 73
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 62
length of query: 666
length of database: 114,650
effective HSP length: 61
effective length of query: 605
effective length of database: 95,313
effective search space: 57664365
effective search space used: 57664365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)
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