Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002615-TA|BGIBMGA002615-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1793 - 39916024-39916824 38 0.026
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 36 0.10
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 36 0.10
06_01_0692 - 5047162-5047441,5047602-5047726,5048257-5048327,504... 33 0.73
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 33 0.73
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 33 0.97
04_04_1380 - 33129484-33129666,33129758-33130039,33130118-33130363 33 0.97
02_05_0973 + 33209385-33209456,33210517-33210721,33210810-332109... 33 0.97
01_06_1380 - 36807339-36807562,36807672-36808050 32 1.3
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 31 2.2
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 31 2.9
01_06_1142 + 34856497-34856698,34857852-34858402 31 2.9
10_05_0007 + 7759814-7760063,7760367-7760507,7760580-7761007 31 3.9
02_05_0320 + 27894604-27894785,27895990-27896043,27897544-278976... 31 3.9
01_06_0201 - 27477392-27479728 31 3.9
11_06_0215 - 21332429-21333037,21333605-21333649 30 5.2
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931... 30 5.2
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 30 5.2
08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127 30 5.2
04_04_1481 - 33894175-33894537,33894618-33894739,33894841-33895225 30 5.2
04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704... 30 5.2
04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484 30 5.2
09_01_0002 - 81412-81944,82191-82539 30 6.8
01_05_0779 + 25128320-25128518,25129048-25129141,25129867-251300... 30 6.8
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 29 9.0
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 9.0
>01_06_1793 - 39916024-39916824
Length = 266
Score = 37.9 bits (84), Expect = 0.026
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 356 NDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQ 406
+D YG + +SP SE YP +DN S GSD D+D GD N+
Sbjct: 33 DDRYGRAGSGNGRSPWTTSEE---YPRYTSDDDNRSGSGSDDDDDHGDRNR 80
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 35.9 bits (79), Expect = 0.10
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S+ R+K+ R ++ LE F HP ++ + LN LES+ V
Sbjct: 117 SNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLN----------LESRQV 166
Query: 625 QFWFKNRRAKCK 636
+FWF+NRR + K
Sbjct: 167 KFWFQNRRTQMK 178
Score = 30.3 bits (65), Expect = 5.2
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 251 PTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVV 310
P +K + P+ ++ +L+ F E HP +Q + R LN LESR+ V
Sbjct: 119 PRKKKKRYHRHTPQ-QIQELEAVFKECPHPDEKQRMELSRRLN-LESRQ---------VK 167
Query: 311 YWFKNARAAQK 321
+WF+N R K
Sbjct: 168 FWFQNRRTQMK 178
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 35.9 bits (79), Expect = 0.10
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 347 PSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSV-LSEDNLSNGGSDLDEDVGDMN 405
P + + M +ND G D S K M +SE P + +V +SE++ S+G S +E D +
Sbjct: 169 PRSKAKMWANDTMGTLDA-SAKDSMVVSEKPEKPQKNVPVSENDSSSGDSSDEEMANDQS 227
Query: 406 QDDRPESPDAPLSL-ITTKKNNNNSD 430
+ D S +A L I +K+ + +D
Sbjct: 228 ESDDSSSEEASEELKIESKQGKDMTD 253
>06_01_0692 -
5047162-5047441,5047602-5047726,5048257-5048327,
5048453-5048834,5049389-5050126
Length = 531
Score = 33.1 bits (72), Expect = 0.73
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 401 VGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQ--ESPKPPDII---KVHDIKQEPKDL 455
V D+++ D S L + K+NN+ DE HQ P DII I+QEP++L
Sbjct: 45 VSDVSKADLRASGKTILDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEEL 104
Query: 456 S 456
S
Sbjct: 105 S 105
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 33.1 bits (72), Expect = 0.73
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 245 TVQSQYPTQKTRM-RTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKP 303
+V Q P Q+ R R + ++ +++ +F E HP +Q ++ REL G +P
Sbjct: 90 SVDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-------GLEP 142
Query: 304 LDVNNVVYWFKNARAAQKRAELRN 327
L V +WF+N R K R+
Sbjct: 143 LQVK---FWFQNKRTQMKNQHERH 163
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 32.7 bits (71), Expect = 0.97
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 265 LELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYWFKNARAAQKRAE 324
L++ L+R+++E Q+P + I +Y + L N V WFK R ++R E
Sbjct: 438 LQIQMLERFYSEVQYPQSEDIAEYATSVG----------LTYNQVRIWFKERRRKERR-E 486
Query: 325 LRNIGG-LSCHLGV--NGFN-SRSHSPS-NGSLMVSNDHYGPQDQNSMKSPMQLS 374
++G + L NGF S S S S + S M + P+D + M +
Sbjct: 487 TESLGAHMEKQLSARSNGFRCSSSRSSSFSRSTMYRTVNLQPEDDRYVDKGMSFT 541
>04_04_1380 - 33129484-33129666,33129758-33130039,33130118-33130363
Length = 236
Score = 32.7 bits (71), Expect = 0.97
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 581 EVPVLEQWF--SMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKNRRAK 634
++ VLE + M T P+ I + TEEL K+ R+E KNV +WF+N +A+
Sbjct: 99 QIKVLEMLYRGGMRT-PNSVQIERITEELG------KYGRIEGKNVFYWFQNHKAR 147
>02_05_0973 +
33209385-33209456,33210517-33210721,33210810-33210975,
33211268-33211490,33211928-33212004,33212090-33212183,
33212202-33212271,33212350-33212447,33212565-33212692,
33212772-33212900,33213013-33213421,33213984-33214105,
33214224-33214313,33215092-33215304,33215453-33215584,
33216258-33216333,33216403-33216420
Length = 773
Score = 32.7 bits (71), Expect = 0.97
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 385 LSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESP--KPPDI 442
L E+N ++ +D E VGD++Q+D S D+ + T K NN ESP KPP
Sbjct: 428 LCEENSNSDNTDCTEIVGDISQEDISGSSDSSCNGTTEDKAENN------ESPPLKPPKF 481
Query: 443 IK 444
K
Sbjct: 482 QK 483
>01_06_1380 - 36807339-36807562,36807672-36808050
Length = 200
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 604 TEELNRMP-YRQKFPRLESKNVQFWFKNRRAK 634
TE++ R+ + F ++ESKNV +WF+N +A+
Sbjct: 38 TEQIQRISTHLSAFGKVESKNVFYWFQNHKAR 69
>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
Length = 749
Score = 31.5 bits (68), Expect = 2.2
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 249 QYPTQKTRM-RTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVN 307
Q P Q+ R R + ++ +L+ +F E HP +Q ++ REL G +PL V
Sbjct: 81 QDPNQRPRKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL-------GLEPLQVK 133
Query: 308 NVVYWFKNARAAQKRAELRN 327
+WF+N R K R+
Sbjct: 134 ---FWFQNKRTQMKTQHERH 150
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S+ R+++ R ++ LE F HP K EL+R L+++ V
Sbjct: 262 SNSRKRKKRYHRHTPQQIQELEALFKECPHPDE----KQRAELSRRL------SLDARQV 311
Query: 625 QFWFKNRRAKCK 636
+FWF+NRR + K
Sbjct: 312 KFWFQNRRTQMK 323
>01_06_1142 + 34856497-34856698,34857852-34858402
Length = 250
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 581 EVPVLEQWFSM-NTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKRLK 639
++ +LE F N PS I T EL++ ++ NV WF+NRRA+ KR +
Sbjct: 99 QLQILENIFDQGNGTPSKQKIKDITAELSQ------HGQISETNVYNWFQNRRARSKRKQ 152
Query: 640 MSL 642
+L
Sbjct: 153 AAL 155
>10_05_0007 + 7759814-7760063,7760367-7760507,7760580-7761007
Length = 272
Score = 30.7 bits (66), Expect = 3.9
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 387 EDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSD---ELHQESPKPPDII 443
ED++S D+D D + DD + D + N+ S+ ++H+ P +
Sbjct: 51 EDDISGERFSTDDDDDDDDDDDDDDDEDEATLNTPVEANHGRSNVARDVHKSLLVPVSAV 110
Query: 444 KVHDIKQEPKD 454
VH+ K P+D
Sbjct: 111 NVHNQKLAPQD 121
>02_05_0320 +
27894604-27894785,27895990-27896043,27897544-27897622,
27899559-27899620,27899852-27899951,27901280-27901321,
27901770-27901915,27902092-27902191
Length = 254
Score = 30.7 bits (66), Expect = 3.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 31 RKTLPVHCVVEAVSSLEESNWRRRAIVETD-SYVIIPAATAFHELVPAAMMRLGYPHELA 89
R+ L V ++++++W + A+VE +YV P +A + P +++GYPH+
Sbjct: 171 RRKLEVEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHSAAMDSEPT--LQIGYPHQFV 228
Query: 90 ASAKGSV 96
+ ++
Sbjct: 229 PAEANTI 235
>01_06_0201 - 27477392-27479728
Length = 778
Score = 30.7 bits (66), Expect = 3.9
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 10 DSENKMTMDSVNNIKKDWLMNRKTLPVHCVVEAV 43
D + + + S+N ++K W++ + +P HC V +
Sbjct: 247 DQDGNLKLYSLNKVEKSWIVTWEAMPQHCDVHGL 280
>11_06_0215 - 21332429-21333037,21333605-21333649
Length = 217
Score = 30.3 bits (65), Expect = 5.2
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Query: 355 SNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDED-VGDMNQDDRPESP 413
S+DH G D ++ P+ +++ S DN S G S + + D+ + +
Sbjct: 61 SSDHEGLNDMSTYAHPINIAKEDSDTLPSPTCPDNFSPGTSRVSKKRPRDVKSPSKRQPK 120
Query: 414 DAPLSLITTKKNNNNSDELHQE--SPKPPDIIKVHD 447
T+K N D L + SP PP + ++ D
Sbjct: 121 PKSRFTDVTEKIGNTMDRLVNQLASPPPPPMPQLRD 156
>10_08_1025 -
22391267-22391767,22392641-22392736,22392838-22393106,
22393257-22393431,22393503-22393718,22393819-22393926,
22394020-22394544,22394631-22394819,22394924-22395041,
22395172-22395437,22395521-22395658
Length = 866
Score = 30.3 bits (65), Expect = 5.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 570 KRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFK 629
K+ R ++ +E F HP LK ++EL P + V+FWF+
Sbjct: 118 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKP----------RQVKFWFQ 167
Query: 630 NRRAKCK 636
NRR + K
Sbjct: 168 NRRTQMK 174
>09_04_0247 +
16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 30.3 bits (65), Expect = 5.2
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 11/123 (8%)
Query: 342 SRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDV 401
+RS + G S DH DQ + +P Q+S+ P + D+ S G + +D
Sbjct: 748 NRSEKSTPGINESSEDHQHKTDQGTETAPKQVSDDLS--PSEKKNSDDQSPGEKKVSDDQ 805
Query: 402 GDMNQD----DRPESPDAPLSLITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSK 457
N + +R +S DA + D + K H++ + +SK
Sbjct: 806 STANLNGAPRERVQSADATAESPQVHVVEKDGDAVRASEDK-----ATHNVTDQSMQVSK 860
Query: 458 TEQ 460
TE+
Sbjct: 861 TEE 863
>08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127
Length = 172
Score = 30.3 bits (65), Expect = 5.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 249 QYPTQKTRM-RTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVN 307
Q P Q+ R R + ++ +++ +F E HP +Q ++ REL G +PL V
Sbjct: 93 QDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL-------GLEPLQVK 145
Query: 308 NVVYWFKNARAAQK 321
+WF+N R K
Sbjct: 146 ---FWFQNKRTQMK 156
>04_04_1481 - 33894175-33894537,33894618-33894739,33894841-33895225
Length = 289
Score = 30.3 bits (65), Expect = 5.2
Identities = 12/37 (32%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 604 TEELNRMPYR-QKFPRLESKNVQFWFKNRRAKCKRLK 639
+E++ R+ +++ R+E KNV +WF+N +A+ ++ K
Sbjct: 60 SEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKK 96
>04_04_0815 -
28269918-28270022,28270164-28270226,28270342-28270460,
28270586-28270684,28270761-28270953,28271024-28271117,
28271339-28271394,28272372-28272431,28272877-28272989,
28273286-28273343,28273429-28273521,28273659-28273904,
28274990-28275371,28275523-28275595,28275692-28275795,
28275872-28275963,28275996-28276106,28276225-28276309,
28276385-28276518,28278264-28278302
Length = 772
Score = 30.3 bits (65), Expect = 5.2
Identities = 16/66 (24%), Positives = 33/66 (50%)
Query: 396 DLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDL 455
+++ D+ D+N DD P+ P +K+ + + +E KP KV+ ++P+D
Sbjct: 639 NIELDIDDINIDDNPQKQKGPHFPGLSKQKISKGFQSLREKLKPRTEEKVNSGNRKPEDD 698
Query: 456 SKTEQI 461
+ Q+
Sbjct: 699 TSVSQV 704
>04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484
Length = 543
Score = 30.3 bits (65), Expect = 5.2
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 387 EDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESPKPPDIIKVH 446
ED++S D+D D + DD + + +N + ++H+ P + VH
Sbjct: 301 EDDISGERFSTDDDDDDDDDDDDEDEATLNTRVEANHGRSNVARDVHKSLLVPVSAVNVH 360
Query: 447 DIKQEPKD 454
+ K P+D
Sbjct: 361 NQKLAPQD 368
>09_01_0002 - 81412-81944,82191-82539
Length = 293
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 374 SESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELH 433
S P R P + + N GSD D+D G M P P ++N + L
Sbjct: 109 SYHPMREPGAAFCLHQIPNMGSDDDDDDG-MEGHISPVREGEPHG---PNPHDNGEEVLQ 164
Query: 434 QESPKPPDIIKVHDIKQEPKDLSKTEQIISPQRSP 468
P PP + +H E +++ I P + P
Sbjct: 165 GLPPSPPPLYPIHS-DDEAEEMHSAMDISEPSQEP 198
>01_05_0779 +
25128320-25128518,25129048-25129141,25129867-25130078,
25130924-25131054,25131933-25132041,25132180-25132659,
25133194-25133531,25133810-25133977
Length = 576
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 383 SVLSEDNLSNGGSDLDEDVGD-MNQDDRPESPDAPLSLITTKKNNNNSDELHQES 436
S + D+L +D+ D MN D E P A LSL T++ NN++DE ++
Sbjct: 289 SAVQFDSLMGFTNDVSSSHHDCMNLVDMVERPVALLSLNDTEEQNNSTDEFPDDT 343
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 29.5 bits (63), Expect = 9.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 35 PVHCVVEAVSSLEESNW-RRRAIVETDSYVIIPAATAFHELVPA 77
P+H +VEA W R+RA V+ ++ A TA VPA
Sbjct: 312 PIHEIVEARLFPSAGGWARKRAAVQASRVAVVGAVTAVACFVPA 355
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.5 bits (63), Expect = 9.0
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 344 SHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMS--VLSEDNLSNGGSDLDEDV 401
S P +GS +S PQ + ++S ++ YP + LS L E
Sbjct: 1171 SPPPISGSKEIS-----PQSRTILESSPDNQDNGHEYPSPPPIPESIELSPHSKALPESS 1225
Query: 402 GDMNQDDRPESPDAPL----------SLITTKKNNNNSDELHQESPKPPDIIKVHDIKQE 451
D NQD PE P P S I + + N D + E P PP I + ++ Q+
Sbjct: 1226 PD-NQDIEPECPSPPQIPESKELSRQSKILPESSPGNQD-IEPECPSPPQIPESKELSQQ 1283
Query: 452 PKDLSKT 458
K L ++
Sbjct: 1284 SKILPES 1290
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,068,113
Number of Sequences: 37544
Number of extensions: 732007
Number of successful extensions: 2110
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2089
Number of HSP's gapped (non-prelim): 41
length of query: 666
length of database: 14,793,348
effective HSP length: 87
effective length of query: 579
effective length of database: 11,527,020
effective search space: 6674144580
effective search space used: 6674144580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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