Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002615-TA|BGIBMGA002615-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(666 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41553-6|AAO91696.1| 297|Caenorhabditis elegans Hypothetical pr... 88 2e-17
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 88 2e-17
U41553-7|AAO91695.1| 103|Caenorhabditis elegans Hypothetical pr... 62 2e-09
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 38 0.030
Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 36 0.070
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 36 0.092
Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical pr... 36 0.12
Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical pr... 36 0.12
U39740-3|AAA80426.2| 542|Caenorhabditis elegans C.elegans homeo... 34 0.28
U39740-2|AAM69077.1| 540|Caenorhabditis elegans C.elegans homeo... 34 0.28
U16367-1|AAA52203.1| 542|Caenorhabditis elegans CEH-18 protein. 34 0.28
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 33 0.49
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 33 0.49
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 33 0.65
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 33 0.65
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 33 0.65
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 33 0.65
DQ365984-1|ABD14369.1| 161|Caenorhabditis elegans F46F6.3 prote... 33 0.86
DQ360812-1|ABC88649.1| 474|Caenorhabditis elegans intraflagella... 33 0.86
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 33 0.86
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 33 0.86
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 33 0.86
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 33 0.86
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 33 0.86
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 33 0.86
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 32 1.1
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 32 1.1
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 32 1.1
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 32 1.1
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 32 1.1
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 32 1.1
AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated... 32 1.1
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z50028-2|CAA90337.1| 158|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z50028-1|CAL36517.1| 471|Caenorhabditis elegans Hypothetical pr... 31 2.0
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 31 2.0
AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family h... 31 2.0
Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical pr... 31 2.6
AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain p... 31 2.6
AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family II... 31 2.6
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 31 3.5
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 31 3.5
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 30 4.6
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 30 4.6
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 30 4.6
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 30 4.6
U50068-8|AAB37739.1| 865|Caenorhabditis elegans Hypothetical pr... 30 4.6
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 30 4.6
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 30 4.6
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 30 4.6
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 30 4.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 4.6
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 30 4.6
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 30 6.0
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 30 6.0
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 30 6.0
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 30 6.0
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 30 6.0
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 30 6.0
AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical ... 30 6.0
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 30 6.0
Z81542-11|CAB04421.1| 243|Caenorhabditis elegans Hypothetical p... 29 8.0
Z81496-12|CAB04074.1| 243|Caenorhabditis elegans Hypothetical p... 29 8.0
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 29 8.0
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 29 8.0
U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical p... 29 8.0
U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical p... 29 8.0
U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical p... 29 8.0
AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical ... 29 8.0
AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain p... 29 8.0
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 29 8.0
AF039047-10|AAB94230.1| 354|Caenorhabditis elegans Prion-like-(... 29 8.0
AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical... 29 8.0
>U41553-6|AAO91696.1| 297|Caenorhabditis elegans Hypothetical
protein ZK1193.5c protein.
Length = 297
Score = 88.2 bits (209), Expect = 2e-17
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 571 RNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKN 630
R+R DP++E+PVLE+WF N HP+ I +YT+ LN YR+ +P + NV+ WFKN
Sbjct: 216 RSRLMFDPLTELPVLEKWFEENPHPTWMQIDQYTQCLNNCAYRENYPHISQHNVKIWFKN 275
Query: 631 RRAKCKRLKMSLYE 644
RRAKCKRL + E
Sbjct: 276 RRAKCKRLLNGMQE 289
Score = 69.7 bits (163), Expect = 6e-12
Identities = 33/67 (49%), Positives = 39/67 (58%)
Query: 256 RMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYWFKN 315
R R FDP ELP L++WF EN HP+ QI QY + LNN R + +NV WFKN
Sbjct: 216 RSRLMFDPLTELPVLEKWFEENPHPTWMQIDQYTQCLNNCAYRENYPHISQHNVKIWFKN 275
Query: 316 ARAAQKR 322
RA KR
Sbjct: 276 RRAKCKR 282
Score = 49.2 bits (112), Expect = 9e-06
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 251 PTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVV 310
PTQ R T + E+P+L +WF + +PS+Q++ Y+ +LN R+ + +
Sbjct: 8 PTQVQRFNTLY----EIPRLDKWFKSDANPSKQKMNNYLSQLNQSPFRKNNSKISYQQIC 63
Query: 311 YWFKNARAAQK 321
WF R++ +
Sbjct: 64 NWFTQKRSSSR 74
Score = 44.8 bits (101), Expect = 2e-04
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 581 EVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKRL 638
E+P L++WF + +PS + Y +LN+ P+R+ ++ + + WF +R+ + L
Sbjct: 19 EIPRLDKWFKSDANPSKQKMNNYLSQLNQSPFRKNNSKISYQQICNWFTQKRSSSRTL 76
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 88.2 bits (209), Expect = 2e-17
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 571 RNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKN 630
R+R DP++E+PVLE+WF N HP+ I +YT+ LN YR+ +P + NV+ WFKN
Sbjct: 387 RSRLMFDPLTELPVLEKWFEENPHPTWMQIDQYTQCLNNCAYRENYPHISQHNVKIWFKN 446
Query: 631 RRAKCKRLKMSLYE 644
RRAKCKRL + E
Sbjct: 447 RRAKCKRLLNGMQE 460
Score = 69.7 bits (163), Expect = 6e-12
Identities = 33/67 (49%), Positives = 39/67 (58%)
Query: 256 RMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYWFKN 315
R R FDP ELP L++WF EN HP+ QI QY + LNN R + +NV WFKN
Sbjct: 387 RSRLMFDPLTELPVLEKWFEENPHPTWMQIDQYTQCLNNCAYRENYPHISQHNVKIWFKN 446
Query: 316 ARAAQKR 322
RA KR
Sbjct: 447 RRAKCKR 453
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 35 PVHCVVEAVSSLEESNWRRRAIVETDSYVIIPAATAFHELVPAAMMRLGYPHELAASAKG 94
P+ +VE V S + TD+Y I+ T ++LV + LG+ ++ SA+G
Sbjct: 3 PMRVIVETVRSQHCLTCSNEGHMITDTYAIVAGTTTLNQLVETVLAALGHS-SMSTSARG 61
Query: 95 SVVINNWKPLPFERISDGPLATVGEVLGELTTVATLRI 132
+ +NNWKPLPF++I++ TV + ++++ L+I
Sbjct: 62 LIQVNNWKPLPFDQITENLDDTVENLFKDISSHVVLKI 99
Score = 49.2 bits (112), Expect = 9e-06
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 251 PTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVV 310
PTQ R T + E+P+L +WF + +PS+Q++ Y+ +LN R+ + +
Sbjct: 179 PTQVQRFNTLY----EIPRLDKWFKSDANPSKQKMNNYLSQLNQSPFRKNNSKISYQQIC 234
Query: 311 YWFKNARAAQK 321
WF R++ +
Sbjct: 235 NWFTQKRSSSR 245
Score = 44.8 bits (101), Expect = 2e-04
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 581 EVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKRL 638
E+P L++WF + +PS + Y +LN+ P+R+ ++ + + WF +R+ + L
Sbjct: 190 EIPRLDKWFKSDANPSKQKMNNYLSQLNQSPFRKNNSKISYQQICNWFTQKRSSSRTL 247
>U41553-7|AAO91695.1| 103|Caenorhabditis elegans Hypothetical
protein ZK1193.5b protein.
Length = 103
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 35 PVHCVVEAVSSLEESNWRRRAIVETDSYVIIPAATAFHELVPAAMMRLGYPHELAASAKG 94
P+ +VE V S + TD+Y I+ T ++LV + LG+ ++ SA+G
Sbjct: 3 PMRVIVETVRSQHCLTCSNEGHMITDTYAIVAGTTTLNQLVETVLAALGHS-SMSTSARG 61
Query: 95 SVVINNWKPLPFERISDGPLATVGEVLGELTTVATLRI 132
+ +NNWKPLPF++I++ TV + ++++ L+I
Sbjct: 62 LIQVNNWKPLPFDQITENLDDTVENLFKDISSHVVLKI 99
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 37.5 bits (83), Expect = 0.030
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 567 ERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQF 626
+R+KRNR D +++ +E+ F+ N +P + ++R K +L + VQ
Sbjct: 42 DRKKRNRITFD-ANQIDEMEKVFAENQYP---------DTMSREKLANKI-QLHEERVQI 90
Query: 627 WFKNRRAKCKR 637
WF+NRRAK +R
Sbjct: 91 WFQNRRAKYRR 101
Score = 34.7 bits (76), Expect = 0.21
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 251 PTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVV 310
P +K R R +FD ++ ++++ FAENQ+P ++ ++ E R V
Sbjct: 41 PDRKKRNRITFDAN-QIDEMEKVFAENQYPDTMSREKLANKIQLHEER----------VQ 89
Query: 311 YWFKNARAAQKRAE 324
WF+N RA +R +
Sbjct: 90 IWFQNRRAKYRREQ 103
>Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 36.3 bits (80), Expect = 0.070
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 11/70 (15%)
Query: 394 GSDLDEDVGDMNQDDRPESPDAPLSLITTKK--NNNNSDELHQ-ESPKPPDIIKVHDIKQ 450
G + +ED+ D+ +DD E+P TKK + ++ D+LH+ +SPK V D K+
Sbjct: 162 GDEDEEDIDDVQEDDEDEAPKKK-----TKKAVSTSDDDDLHEDDSPKGG---SVSDEKE 213
Query: 451 EPKDLSKTEQ 460
EP++ TE+
Sbjct: 214 EPENEDDTEE 223
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 35.9 bits (79), Expect = 0.092
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
Query: 354 VSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDD---RP 410
VSN+ YGP K P + S + S + +S + + QD +
Sbjct: 268 VSNEEYGPHTFMRKKVPKEASSATSS-SSSTTTLTTISGASGSTTSGISNAPQDSASTKT 326
Query: 411 ESPDAPLSLITTKKNNNNSDELHQESPKP--PDIIK--VHDIKQEPKDLSK----TEQII 462
+ S + TK +NNN + L SPKP DI + + PK S +E I
Sbjct: 327 TTNTFTSSYLLTKTSNNNINALVSSSPKPFSKDIGRSMFSPVHFTPKSTSSPKTLSESIF 386
Query: 463 SPQRSPA 469
SP +S A
Sbjct: 387 SPSKSAA 393
>Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.12
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
+D +RNRT ++ VLE F +T+P N ++E L + +
Sbjct: 183 NDASSRRNRTSFT-AEQLDVLENAFRADTYPHANARESISKETG----------LSEEKI 231
Query: 625 QFWFKNRRAKCKRLKMSLYE 644
WF NRRA+C++ M +Y+
Sbjct: 232 MTWFSNRRARCRK-NMPMYQ 250
>Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.12
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
+D +RNRT ++ VLE F +T+P N ++E L + +
Sbjct: 183 NDASSRRNRTSFT-AEQLDVLENAFRADTYPHANARESISKETG----------LSEEKI 231
Query: 625 QFWFKNRRAKCKRLKMSLYE 644
WF NRRA+C++ M +Y+
Sbjct: 232 MTWFSNRRARCRK-NMPMYQ 250
>U39740-3|AAA80426.2| 542|Caenorhabditis elegans C.elegans homeobox
protein 18,isoform a protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.28
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+R RT +D +++ L+ +F++N P H+ K T+ N + L+ V+ W
Sbjct: 420 KRRRKRTNLD-MNQRNALDTFFALNPRPDHD---KMTDIANSL-------ELDRDVVRVW 468
Query: 628 FKNRRAKCKRL 638
F NRR K +R+
Sbjct: 469 FCNRRQKMRRV 479
>U39740-2|AAM69077.1| 540|Caenorhabditis elegans C.elegans homeobox
protein 18,isoform b protein.
Length = 540
Score = 34.3 bits (75), Expect = 0.28
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+R RT +D +++ L+ +F++N P H+ K T+ N + L+ V+ W
Sbjct: 418 KRRRKRTNLD-MNQRNALDTFFALNPRPDHD---KMTDIANSL-------ELDRDVVRVW 466
Query: 628 FKNRRAKCKRL 638
F NRR K +R+
Sbjct: 467 FCNRRQKMRRV 477
>U16367-1|AAA52203.1| 542|Caenorhabditis elegans CEH-18 protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.28
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+R RT +D +++ L+ +F++N P H+ K T+ N + L+ V+ W
Sbjct: 420 KRRRKRTNLD-MNQRNALDTFFALNPRPDHD---KMTDIANSL-------ELDRDVVRVW 468
Query: 628 FKNRRAKCKRL 638
F NRR K +R+
Sbjct: 469 FCNRRQKMRRV 479
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 33.5 bits (73), Expect = 0.49
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 354 VSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPE 411
V +DHY DQ S+KSP + E+ ++ S +D + ED+ + PE
Sbjct: 3935 VKSDHYTEDDQESLKSPKESGEAFSQF-TSEKEQDRSDSPIHSQKEDISQFQNESSPE 3991
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 33.5 bits (73), Expect = 0.49
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 354 VSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPE 411
V +DHY DQ S+KSP + E+ ++ S +D + ED+ + PE
Sbjct: 3935 VKSDHYTEDDQESLKSPKESGEAFSQF-TSEKEQDRSDSPIHSQKEDISQFQNESSPE 3991
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 33.1 bits (72), Expect = 0.65
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 253 QKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYW 312
Q R RT+F E ++ +L+R FA+ + SR+ + ELN L + W
Sbjct: 67 QMRRYRTAFSRE-QIGRLEREFAKENYVSRKTRGELAAELN----------LPEGTIKVW 115
Query: 313 FKNARAAQKRAELRNIGGLS 332
F+N R KR + +GGL+
Sbjct: 116 FQNRRMKDKR---QRVGGLA 132
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 33.1 bits (72), Expect = 0.65
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 253 QKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYW 312
Q R RT+F E ++ +L+R FA+ + SR+ + ELN L + W
Sbjct: 83 QMRRYRTAFSRE-QIGRLEREFAKENYVSRKTRGELAAELN----------LPEGTIKVW 131
Query: 313 FKNARAAQKRAELRNIGGLS 332
F+N R KR + +GGL+
Sbjct: 132 FQNRRMKDKR---QRVGGLA 148
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.65
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 566 DERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQ 625
D KR RT I S + L+Q + ++ P+ ++ + E L+ + VQ
Sbjct: 177 DGSNKRPRTTISAKS-LETLKQAYQTSSKPARHVREQLASETG----------LDMRVVQ 225
Query: 626 FWFKNRRAKCKRLK 639
WF+NRRAK KRLK
Sbjct: 226 VWFQNRRAKEKRLK 239
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.65
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 566 DERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQ 625
D KR RT I S + L+Q + ++ P+ ++ + E L+ + VQ
Sbjct: 177 DGSNKRPRTTISAKS-LETLKQAYQTSSKPARHVREQLASETG----------LDMRVVQ 225
Query: 626 FWFKNRRAKCKRLK 639
WF+NRRAK KRLK
Sbjct: 226 VWFQNRRAKEKRLK 239
>DQ365984-1|ABD14369.1| 161|Caenorhabditis elegans F46F6.3 protein
protein.
Length = 161
Score = 32.7 bits (71), Expect = 0.86
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 352 LMVSNDHYGPQDQNSMKSPMQLSESPGRY--PMSVLSEDNLSNGGSDLDEDVGDMNQDDR 409
L +S++ P N KS + + PG+ P+S S ++ + L+ED G ++
Sbjct: 2 LTMSSETTAPMIINE-KSSLPVKSEPGQLGNPISDESSEDEQSQIRALEEDQGIYYNEEV 60
Query: 410 PESP----DAPLSLITTKKNNNNSDELHQESPKPPDIIKVHDIK 449
SP D + L + ++ S + H E +P ++I V+DI+
Sbjct: 61 VASPKNESDDDIPLRRIQLSHQTSTQQHPEDSEPQEVIDVNDIE 104
>DQ360812-1|ABC88649.1| 474|Caenorhabditis elegans intraflagellar
transport proteinvariant a protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.86
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 352 LMVSNDHYGPQDQNSMKSPMQLSESPGRY--PMSVLSEDNLSNGGSDLDEDVGDMNQDDR 409
L +S++ P N KS + + PG+ P+S S ++ + L+ED G ++
Sbjct: 2 LTMSSETTAPMIINE-KSSLPVKSEPGQLGNPISDESSEDEQSQIRALEEDQGIYYNEEV 60
Query: 410 PESP----DAPLSLITTKKNNNNSDELHQESPKPPDIIKVHDIK 449
SP D + L + ++ S + H E +P ++I V+DI+
Sbjct: 61 VASPKNESDDDIPLRRIQLSHQTSTQQHPEDSEPQEVIDVNDIE 104
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 32.7 bits (71), Expect = 0.86
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S ++R+ TF +++ +LE +F +P ++ ++ M ++ + P ES+ V
Sbjct: 143 SRKQRRERTTFTR--NQLEILESYFVKTRYP--DIFMR-----EDMAHKIQLP--ESR-V 190
Query: 625 QFWFKNRRAKCKRLKMSL 642
Q WFKNRRAK ++ K +L
Sbjct: 191 QVWFKNRRAKARQQKKTL 208
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 32.7 bits (71), Expect = 0.86
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S ++R+ TF +++ +LE +F +P ++ ++ M ++ + P ES+ V
Sbjct: 196 SRKQRRERTTFTR--NQLEILESYFVKTRYP--DIFMR-----EDMAHKIQLP--ESR-V 243
Query: 625 QFWFKNRRAKCKRLKMSL 642
Q WFKNRRAK ++ K +L
Sbjct: 244 QVWFKNRRAKARQQKKTL 261
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 32.7 bits (71), Expect = 0.86
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S ++R+ TF +++ +LE +F +P ++ ++ M ++ + P ES+ V
Sbjct: 177 SRKQRRERTTFTR--NQLEILESYFVKTRYP--DIFMR-----EDMAHKIQLP--ESR-V 224
Query: 625 QFWFKNRRAKCKRLKMSL 642
Q WFKNRRAK ++ K +L
Sbjct: 225 QVWFKNRRAKARQQKKTL 242
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.86
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S ++R+ TF +++ +LE +F +P ++ ++ M ++ + P ES+ V
Sbjct: 137 SRKQRRERTTFTR--NQLEILESYFVKTRYP--DIFMR-----EDMAHKIQLP--ESR-V 184
Query: 625 QFWFKNRRAKCKRLKMSL 642
Q WFKNRRAK ++ K +L
Sbjct: 185 QVWFKNRRAKARQQKKTL 202
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 32.7 bits (71), Expect = 0.86
Identities = 13/51 (25%), Positives = 33/51 (64%)
Query: 419 LITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQIISPQRSPA 469
++ T+ N++ DEL++ES +PP +++ +++ +L +E+ + +R P+
Sbjct: 95 VVVTRTINDSVDELYRESEQPPLDVEMIELRDMGYNLRGSERALDGRREPS 145
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 32.7 bits (71), Expect = 0.86
Identities = 13/51 (25%), Positives = 33/51 (64%)
Query: 419 LITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQIISPQRSPA 469
++ T+ N++ DEL++ES +PP +++ +++ +L +E+ + +R P+
Sbjct: 95 VVVTRTINDSVDELYRESEQPPLDVEMIELRDMGYNLRGSERALDGRREPS 145
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 32.3 bits (70), Expect = 1.1
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 256 RMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYWFKN 315
RMRTSF +L ++ +FA N +P + ++Q + N ++ L V WF+N
Sbjct: 294 RMRTSFKHH-QLRAMKTYFALNHNPDAKDLKQLAAKTNLT-----KRVLQV-----WFQN 342
Query: 316 ARAAQKRAELRNIGGLSCHLGVN 338
ARA +R EL + G S L V+
Sbjct: 343 ARAKYRR-ELHDGGRSSSPLCVS 364
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 32.3 bits (70), Expect = 1.1
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 256 RMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYWFKN 315
RMRTSF +L ++ +FA N +P + ++Q + N ++ L V WF+N
Sbjct: 294 RMRTSFKHH-QLRAMKTYFALNHNPDAKDLKQLAAKTNLT-----KRVLQV-----WFQN 342
Query: 316 ARAAQKRAELRNIGGLSCHLGVN 338
ARA +R EL + G S L V+
Sbjct: 343 ARAKYRR-ELHDGGRSSSPLCVS 364
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 566 DERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQ 625
D R R+R+F++ S+V VL+ F N PS + E++ + + VQ
Sbjct: 220 DWRPLRSRSFLND-SQVAVLQNHFKRNPFPSKYELSAVAEQIG----------VNKRVVQ 268
Query: 626 FWFKNRRAKCKR 637
WF+N RAK +R
Sbjct: 269 VWFQNTRAKERR 280
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 566 DERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQ 625
D R R+R+F++ S+V VL+ F N PS + E++ + + VQ
Sbjct: 220 DWRPLRSRSFLND-SQVAVLQNHFKRNPFPSKYELSAVAEQIG----------VNKRVVQ 268
Query: 626 FWFKNRRAKCKR 637
WF+N RAK +R
Sbjct: 269 VWFQNTRAKERR 280
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 566 DERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQ 625
D R R+R+F++ S+V VL+ F N PS + E++ + + VQ
Sbjct: 220 DWRPLRSRSFLND-SQVAVLQNHFKRNPFPSKYELSAVAEQIG----------VNKRVVQ 268
Query: 626 FWFKNRRAKCKR 637
WF+N RAK +R
Sbjct: 269 VWFQNTRAKERR 280
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 342 SRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
++SHS SN S V ND P Q P Q S+ + +V + + SNG S
Sbjct: 13 NQSHSRSNSSSSVDNDRNQPPQQPPQPQPQQQSQQQYQQAPNVNTNMHHSNGFS 66
>AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated
protein 23, isoform a protein.
Length = 458
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 342 SRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGS 395
++SHS SN S V ND P Q P Q S+ + +V + + SNG S
Sbjct: 14 NQSHSRSNSSSSVDNDRNQPPQQPPQPQPQQQSQQQYQQAPNVNTNMHHSNGFS 67
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 31.5 bits (68), Expect = 2.0
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 569 RKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWF 628
R++ R P +V VLE+ F +N +Y +R + L + V+ WF
Sbjct: 98 RRKRRVLFSP-QQVHVLERKFQIN---------RYLSAADRENLAKSI-NLSATQVKIWF 146
Query: 629 KNRRAKCKR 637
+N+R KCKR
Sbjct: 147 QNQRYKCKR 155
>Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 31.5 bits (68), Expect = 2.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 619 LESKNVQFWFKNRRAKCKRL 638
L + V+ WF+NRR KCKRL
Sbjct: 174 LTATQVKIWFQNRRYKCKRL 193
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 567 ERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQF 626
++ +R RT ++ LE WFS N +P + EE+ + L V+
Sbjct: 110 QKPRRQRTHFTS-HQLTELENWFSRNRYPD----MACREEI------AVWISLTEPRVRV 158
Query: 627 WFKNRRAKCKR 637
WFKNRRAK ++
Sbjct: 159 WFKNRRAKWRK 169
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 567 ERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQF 626
++ +R RT ++ LE WFS N +P + EE+ + L V+
Sbjct: 110 QKPRRQRTHFTS-HQLTELENWFSRNRYPD----MACREEI------AVWISLTEPRVRV 158
Query: 627 WFKNRRAKCKR 637
WFKNRRAK ++
Sbjct: 159 WFKNRRAKWRK 169
>Z50028-2|CAA90337.1| 158|Caenorhabditis elegans Hypothetical
protein F46F6.4b protein.
Length = 158
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 368 KSPMQLSESPGRY--PMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESP----DAPLSLIT 421
KS + + PG+ P+S S ++ + L+ED G ++ SP D + L
Sbjct: 14 KSSLPVKSEPGQLGNPISDESSEDEQSQIRALEEDQGIYYNEEVVASPKNESDDDIPLRR 73
Query: 422 TKKNNNNSDELHQESPKPPDIIKVHDIK 449
+ ++ S + H E +P ++I V+DI+
Sbjct: 74 IQLSHQTSTQQHPEDSEPQEVIDVNDIE 101
>Z50028-1|CAL36517.1| 471|Caenorhabditis elegans Hypothetical
protein F46F6.4a protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 368 KSPMQLSESPGRY--PMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESP----DAPLSLIT 421
KS + + PG+ P+S S ++ + L+ED G ++ SP D + L
Sbjct: 14 KSSLPVKSEPGQLGNPISDESSEDEQSQIRALEEDQGIYYNEEVVASPKNESDDDIPLRR 73
Query: 422 TKKNNNNSDELHQESPKPPDIIKVHDIK 449
+ ++ S + H E +P ++I V+DI+
Sbjct: 74 IQLSHQTSTQQHPEDSEPQEVIDVNDIE 101
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 567 ERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQF 626
++ +R RT ++ LE WFS N +P + EE+ + L V+
Sbjct: 110 QKPRRQRTHFTS-HQLTELENWFSRNRYPD----MACREEI------AVWISLTEPRVRV 158
Query: 627 WFKNRRAKCKR 637
WFKNRRAK ++
Sbjct: 159 WFKNRRAKWRK 169
>AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family
homeodomain factorCEH-28 protein.
Length = 156
Score = 31.5 bits (68), Expect = 2.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 619 LESKNVQFWFKNRRAKCKRL 638
L + V+ WF+NRR KCKRL
Sbjct: 130 LTATQVKIWFQNRRYKCKRL 149
>Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical
protein K02B12.1 protein.
Length = 380
Score = 31.1 bits (67), Expect = 2.6
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
R+++ RT I+ V+ LE F N P+ I + EL +LE + V+ W
Sbjct: 280 RKRKKRTSIE-VNVKSRLEFHFQSNQKPNAQEITQVAMEL----------QLEKEVVRVW 328
Query: 628 FKNRRAKCKRLKMSLYE 644
F NRR K KR+ + Y+
Sbjct: 329 FCNRRQKEKRIAPNQYD 345
Score = 29.5 bits (63), Expect = 8.0
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 253 QKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYW 312
+K + RTS + ++ +L+ F NQ P+ Q+I Q EL L+ V W
Sbjct: 280 RKRKKRTSIEVNVK-SRLEFHFQSNQKPNAQEITQVAMELQ----------LEKEVVRVW 328
Query: 313 FKNARAAQKR 322
F N R +KR
Sbjct: 329 FCNRRQKEKR 338
>AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 223
Score = 31.1 bits (67), Expect = 2.6
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S ++R+ TF +++ +LE +F +P ++ ++ M ++ + P ES+ V
Sbjct: 159 SRKQRRERTTFTR--NQLEILESYFVKTRYP--DIFMR-----EDMAHKIQLP--ESR-V 206
Query: 625 QFWFKNRRAKCKRLK 639
Q WFKNRRAK ++ K
Sbjct: 207 QVWFKNRRAKARQQK 221
>AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family III
homeodomain proteinCEH-6 protein.
Length = 380
Score = 31.1 bits (67), Expect = 2.6
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
R+++ RT I+ V+ LE F N P+ I + EL +LE + V+ W
Sbjct: 280 RKRKKRTSIE-VNVKSRLEFHFQSNQKPNAQEITQVAMEL----------QLEKEVVRVW 328
Query: 628 FKNRRAKCKRLKMSLYE 644
F NRR K KR+ + Y+
Sbjct: 329 FCNRRQKEKRIAPNQYD 345
Score = 29.5 bits (63), Expect = 8.0
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 253 QKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYW 312
+K + RTS + ++ +L+ F NQ P+ Q+I Q EL L+ V W
Sbjct: 280 RKRKKRTSIEVNVK-SRLEFHFQSNQKPNAQEITQVAMELQ----------LEKEVVRVW 328
Query: 313 FKNARAAQKR 322
F N R +KR
Sbjct: 329 FCNRRQKEKR 338
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 30.7 bits (66), Expect = 3.5
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 390 LSNGGSDLDEDVGDMNQDDRPESPDAPLSL---ITTKKNNNNSDELHQESPKPPDIIKVH 446
L NGG + DE D + + +PE D L +K + + + E K ++++
Sbjct: 199 LENGGQEEDEPDRDESIEKQPEKEDDGDELDYGDDEEKEQKDDESMDAEDAKEEKVVQIE 258
Query: 447 DIKQEPKD--LSKTEQI 461
K+E KD + K E++
Sbjct: 259 KEKKEDKDDGVKKEEKV 275
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 30.7 bits (66), Expect = 3.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 378 GRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESP 437
GR V E+ +GG DLDED D+ DD + + IT + + + S
Sbjct: 666 GRPRKRVKLENGQEDGGGDLDED-DDVVMDDYEDGEENGDKKITASRRSESPKPASSSSE 724
Query: 438 KPP 440
PP
Sbjct: 725 PPP 727
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 30.3 bits (65), Expect = 4.6
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+ RT I +++ VL + FS PS + K E L + +Q W
Sbjct: 208 KRRGPRTTIKQ-NQLDVLNEMFSNTPKPSKHARAKLALETG----------LSMRVIQVW 256
Query: 628 FKNRRAKCKRLK 639
F+NRR+K +RLK
Sbjct: 257 FQNRRSKERRLK 268
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 30.3 bits (65), Expect = 4.6
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+ RT I +++ VL + FS PS + K E L + +Q W
Sbjct: 216 KRRGPRTTIKQ-NQLDVLNEMFSNTPKPSKHARAKLALETG----------LSMRVIQVW 264
Query: 628 FKNRRAKCKRLK 639
F+NRR+K +RLK
Sbjct: 265 FQNRRSKERRLK 276
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 618 RLESKNVQFWFKNRRAK 634
RL+ +Q WFKNRRAK
Sbjct: 79 RLQESRIQVWFKNRRAK 95
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 618 RLESKNVQFWFKNRRAKCKRLK 639
+L V+ WF+NRRAK KRL+
Sbjct: 167 QLTETQVKIWFQNRRAKSKRLQ 188
>U50068-8|AAB37739.1| 865|Caenorhabditis elegans Hypothetical
protein C01G5.8 protein.
Length = 865
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 401 VGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQ 460
+GD + D+ E+P T ++ + D++ E P P I+K H++ E D+++ +
Sbjct: 88 LGDASFSDKSENPTKRRK--TDEREVPSEDDIVPEVPGPSGIVKNHEMPSESLDVTEISE 145
Query: 461 II 462
I
Sbjct: 146 NI 147
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 30.3 bits (65), Expect = 4.6
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 408 DRPESPDAPLSLITTKK--NNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQIISPQ 465
D PE P+A ++ KK + +D L PK P + K K +P D K++ +
Sbjct: 195 DEPEEPEADYTMPAPKKPDTEDPADPLGGPKPKDPKLAKKAPAK-KPTDKPKSKDVPKEA 253
Query: 466 RSPAK 470
PA+
Sbjct: 254 PKPAE 258
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 30.3 bits (65), Expect = 4.6
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+ RT I +++ VL + FS PS + K E L + +Q W
Sbjct: 208 KRRGPRTTIKQ-NQLDVLNEMFSNTPKPSKHARAKLALETG----------LSMRVIQVW 256
Query: 628 FKNRRAKCKRLK 639
F+NRR+K +RLK
Sbjct: 257 FQNRRSKERRLK 268
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 30.3 bits (65), Expect = 4.6
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
+R+ RT I +++ VL + FS PS + K E L + +Q W
Sbjct: 216 KRRGPRTTIKQ-NQLDVLNEMFSNTPKPSKHARAKLALETG----------LSMRVIQVW 264
Query: 628 FKNRRAKCKRLK 639
F+NRR+K +RLK
Sbjct: 265 FQNRRSKERRLK 276
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 618 RLESKNVQFWFKNRRAKCKRLK 639
+L V+ WF+NRRAK KRL+
Sbjct: 167 QLTETQVKIWFQNRRAKSKRLQ 188
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 4.6
Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 362 QDQNSMKSPMQLSESPGRYPM-SVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLI 420
+++ +SP++ ++P +Y S ++ + G++ +E+V + + + ++P
Sbjct: 472 EEEEVEESPIKKDKTPRKYSRKSAAKVESTESSGNEEEEEVEE-SPKKKGKTPRKSSKKS 530
Query: 421 TTKKNNNNSDELHQESPK----PPDIIKVHDIKQEPKDLS--KTEQIISPQRSPAKXXXX 474
+ ++N +E +ESPK P K K+E ++ S + E++ + K
Sbjct: 531 AAVEESDNEEEDVEESPKKRTSPRKSSKKRAAKEESEESSDNEVEEVEDSPKKNDKTLRK 590
Query: 475 XXXXXXXXXXXXXXXGVIEDHESDEESPQERLYRPSSS 512
G E+ E EESP+++ P S
Sbjct: 591 SPRKPAAKVESEESFG-NEEEEEVEESPKKKGKTPRKS 627
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 30.3 bits (65), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 568 RRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFW 627
RRKR I ++ +LE FS +P EEL L+ + V+ W
Sbjct: 107 RRKRRHRTIFSEEQLNILETTFSTTHYPDATT----REELAVQC------SLKEERVEVW 156
Query: 628 FKNRRAKCKRLK 639
FKNRRAK ++ K
Sbjct: 157 FKNRRAKERKQK 168
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 29.9 bits (64), Expect = 6.0
Identities = 52/225 (23%), Positives = 79/225 (35%), Gaps = 23/225 (10%)
Query: 247 QSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDV 306
Q +P +M P LP+ H QQ+QQ R +E G P +
Sbjct: 453 QQNHPHMNAQMTQQQHPGQYLPQQYMQMVPPPHHQMQQMQQQGRRPGGVEPLMGGPPYQM 512
Query: 307 NNVVYWFKNARAAQKRAELRNIGGLSCHLGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNS 366
+ + Q +R G+ + FNS + GS G Q+S
Sbjct: 513 SGQI--------NQMGGPIRGGFGMQQQQPMGYFNS-GRGGNAGSGRGRGGSRGHGYQHS 563
Query: 367 MKSPMQLSESPGRYPMSVLSEDNLSNGGSD---LDEDVGDMNQ--------DDRPESPDA 415
++ Q S YP + + D+ S SD +DE V + R SP
Sbjct: 564 RQNSNQSYNSSQSYPQNRGNFDSSSQYQSDSQQVDESVTQLTNRIEHLQPVSSRAGSPSK 623
Query: 416 PLSLITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQ 460
+ + K++ S E + ESP K K+ PK K +Q
Sbjct: 624 QILQLVESKDDQTSTE-NSESPSRSSTPKHR--KKTPKKDFKVDQ 665
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 29.9 bits (64), Expect = 6.0
Identities = 52/225 (23%), Positives = 79/225 (35%), Gaps = 23/225 (10%)
Query: 247 QSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDV 306
Q +P +M P LP+ H QQ+QQ R +E G P +
Sbjct: 450 QQNHPHMNAQMTQQQHPGQYLPQQYMQMVPPPHHQMQQMQQQGRRPGGVEPLMGGPPYQM 509
Query: 307 NNVVYWFKNARAAQKRAELRNIGGLSCHLGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNS 366
+ + Q +R G+ + FNS + GS G Q+S
Sbjct: 510 SGQI--------NQMGGPIRGGFGMQQQQPMGYFNS-GRGGNAGSGRGRGGSRGHGYQHS 560
Query: 367 MKSPMQLSESPGRYPMSVLSEDNLSNGGSD---LDEDVGDMNQ--------DDRPESPDA 415
++ Q S YP + + D+ S SD +DE V + R SP
Sbjct: 561 RQNSNQSYNSSQSYPQNRGNFDSSSQYQSDSQQVDESVTQLTNRIEHLQPVSSRAGSPSK 620
Query: 416 PLSLITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQ 460
+ + K++ S E + ESP K K+ PK K +Q
Sbjct: 621 QILQLVESKDDQTSTE-NSESPSRSSTPKHR--KKTPKKDFKVDQ 662
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 29.9 bits (64), Expect = 6.0
Identities = 23/105 (21%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 366 SMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPE----SPDAPLSLIT 421
S +S M+ E P R P + ++ SN SD+DE++ D PE S D ++ +
Sbjct: 71 SSQSKMKEPEVPEREPST--PNNSRSNWRSDMDEELTDDEDTPTPEVIDVSSDESMADVM 128
Query: 422 TKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQIISPQR 466
+ N +E E+ + + + V +++++ +++ + ++ + R
Sbjct: 129 EEINQEVEEEEEGEAEEGQEEV-VEEVEEDEEEVEEIKEKVEEVR 172
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S R+K+ RT S+V LE F +Y R QK E++ V
Sbjct: 197 SQNRKKKTRTVFSR-SQVSQLEMMFECK---------RYLSSQERSNLAQKLHLTETQ-V 245
Query: 625 QFWFKNRRAKCKR 637
+ WF+NRR K KR
Sbjct: 246 KIWFQNRRNKFKR 258
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 29.9 bits (64), Expect = 6.0
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 335 LGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGG 394
LGV+ ++ H G +V + ++ + +S Q ES M S++NL
Sbjct: 1239 LGVDEYDFDEHDGDEGCELVQDMLDRERNLMNKRSTAQRRESRNIEKMKK-SQENLDKEK 1297
Query: 395 SDLDEDVGDMNQDDRPESPDAP 416
S+ NQDD ESP+ P
Sbjct: 1298 SEEKISESKKNQDDSIESPNLP 1319
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 29.9 bits (64), Expect = 6.0
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 335 LGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGG 394
LGV+ ++ H G +V + ++ + +S Q ES M S++NL
Sbjct: 1239 LGVDEYDFDEHDGDEGCELVQDMLDRERNLMNKRSTAQRRESRNIEKMKK-SQENLDKEK 1297
Query: 395 SDLDEDVGDMNQDDRPESPDAP 416
S+ NQDD ESP+ P
Sbjct: 1298 SEEKISESKKNQDDSIESPNLP 1319
>AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical
protein Y105E8B.3 protein.
Length = 529
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 426 NNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQIISPQRSPAK 470
N ++L ++ D + DI++EP+DL K + + Q + K
Sbjct: 332 NRQEEDLGEDEDDSDDSKSMEDIQEEPEDLEKDHEELQAQENTVK 376
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 29.9 bits (64), Expect = 6.0
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 335 LGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGG 394
LGV+ ++ H G +V + ++ + +S Q ES M S++NL
Sbjct: 1239 LGVDEYDFDEHDGDEGCELVQDMLDRERNLMNKRSTAQRRESRNIEKMKK-SQENLDKEK 1297
Query: 395 SDLDEDVGDMNQDDRPESPDAP 416
S+ NQDD ESP+ P
Sbjct: 1298 SEEKISESKKNQDDSIESPNLP 1319
>Z81542-11|CAB04421.1| 243|Caenorhabditis elegans Hypothetical
protein F09C6.3 protein.
Length = 243
Score = 29.5 bits (63), Expect = 8.0
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 323 AELRNIGGLSCHLGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPM 382
A NI G + N + SRS N S+ S D + N+ + + +P
Sbjct: 29 ANSNNIPGGNSSRIENVYTSRSEPRGNPSVHFSYDSKTTINSNNTTIDNKRQRTTQHFPT 88
Query: 383 SVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNN 427
S S+ + + G + D+N D + ES +A + + KK NN
Sbjct: 89 SNPSDRSTTFGANPFS----DVNSDIKHESSEANDAFESHKKRNN 129
>Z81496-12|CAB04074.1| 243|Caenorhabditis elegans Hypothetical
protein F09C6.3 protein.
Length = 243
Score = 29.5 bits (63), Expect = 8.0
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 323 AELRNIGGLSCHLGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPM 382
A NI G + N + SRS N S+ S D + N+ + + +P
Sbjct: 29 ANSNNIPGGNSSRIENVYTSRSEPRGNPSVHFSYDSKTTINSNNTTIDNKRQRTTQHFPT 88
Query: 383 SVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNN 427
S S+ + + G + D+N D + ES +A + + KK NN
Sbjct: 89 SNPSDRSTTFGANPFS----DVNSDIKHESSEANDAFESHKKRNN 129
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 29.5 bits (63), Expect = 8.0
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 246 VQSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLD 305
V SQ K R+RT+F E +L LQ +F + +P +++ + + L R
Sbjct: 232 VSSQKAKTK-RVRTTF-AEDQLSVLQTYFNRDSNPDGADLEK-IASMTGLSKR------- 281
Query: 306 VNNVVYWFKNARAAQKRAELRNIG--GLSCHLGVNGFNSRSHSPSNGSLM 353
V V WF+N+RA QK+ ++ G G S V + S S+ +M
Sbjct: 282 VTQV--WFQNSRARQKKWHQKSEGDNGDSQRSSVGPSSPSQKSDSSSEMM 329
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 29.5 bits (63), Expect = 8.0
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 246 VQSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLD 305
V SQ K R+RT+F E +L LQ +F + +P +++ + + L R
Sbjct: 232 VSSQKAKTK-RVRTTF-AEDQLSVLQTYFNRDSNPDGADLEK-IASMTGLSKR------- 281
Query: 306 VNNVVYWFKNARAAQKRAELRNIG--GLSCHLGVNGFNSRSHSPSNGSLM 353
V V WF+N+RA QK+ ++ G G S V + S S+ +M
Sbjct: 282 VTQV--WFQNSRARQKKWHQKSEGDNGDSQRSSVGPSSPSQKSDSSSEMM 329
>U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical
protein F42G9.6c protein.
Length = 659
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 408 DRPESPDAPLSLITTKKNNNNSDELHQESPKPP 440
D P +PD +L+T + + SD + SP PP
Sbjct: 546 DSPTTPDIESALLTRRNSYGASDPTSEASPTPP 578
>U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical
protein F42G9.6b protein.
Length = 683
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 408 DRPESPDAPLSLITTKKNNNNSDELHQESPKPP 440
D P +PD +L+T + + SD + SP PP
Sbjct: 570 DSPTTPDIESALLTRRNSYGASDPTSEASPTPP 602
>U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical
protein F42G9.6a protein.
Length = 657
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 408 DRPESPDAPLSLITTKKNNNNSDELHQESPKPP 440
D P +PD +L+T + + SD + SP PP
Sbjct: 544 DSPTTPDIESALLTRRNSYGASDPTSEASPTPP 576
>AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical
protein Y75B8A.2b protein.
Length = 218
Score = 29.5 bits (63), Expect = 8.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 619 LESKNVQFWFKNRRAKCKRLK 639
L+ K V+ WF+NRR K K+L+
Sbjct: 176 LDEKQVKVWFQNRRMKDKKLR 196
>AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain
protein NOB-1A protein.
Length = 218
Score = 29.5 bits (63), Expect = 8.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 619 LESKNVQFWFKNRRAKCKRLK 639
L+ K V+ WF+NRR K K+L+
Sbjct: 176 LDEKQVKVWFQNRRMKDKKLR 196
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 29.5 bits (63), Expect = 8.0
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 363 DQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITT 422
D+ S K P L + + +E ++E V M+ DD + DA + I T
Sbjct: 129 DEKSEKKPWNLEDEDDEDEFDIKNEGISEENPVKMEEKVEKMDTDDEEDPLDAFMKEIAT 188
Query: 423 KKNNNNSDELHQESPKPPDIIK-VHDIKQEPK 453
K N+ + + K I+ V + K EP+
Sbjct: 189 K----NAKKTGNSTQKASGIVTIVQEEKPEPE 216
>AF039047-10|AAB94230.1| 354|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 51
protein.
Length = 354
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 383 SVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESPKPPDI 442
S+L + L GG + D + +D P+ D PL I + N ++ Q + + P
Sbjct: 237 SLLKDFQLDGGGGGMS----DSSSEDEPDDDDDPLRRIADRMGNGEVEDGDQVAEEEP-- 290
Query: 443 IKVHDIKQEPKDLS 456
+ D + + +DL+
Sbjct: 291 LNSEDDQSDDEDLT 304
>AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical
protein C09G12.1 protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 565 SDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNV 624
S+ERR R +++ +LE+ F +P ++ E L + L +
Sbjct: 86 SEERRVRRLRTAFSENQLELLEEAFLKCQYPD----VQQRETLGKQT------ELAEARI 135
Query: 625 QFWFKNRRAKCKR 637
Q WFKNRRAK ++
Sbjct: 136 QVWFKNRRAKARK 148
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.131 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,455,788
Number of Sequences: 27539
Number of extensions: 646617
Number of successful extensions: 2503
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2421
Number of HSP's gapped (non-prelim): 131
length of query: 666
length of database: 12,573,161
effective HSP length: 86
effective length of query: 580
effective length of database: 10,204,807
effective search space: 5918788060
effective search space used: 5918788060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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