GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002614-TA|BGIBMGA002614-PA|undefined
         (53 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    21   3.2  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           21   5.6  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    20   7.4  

>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 27  DLSQDKPDRNKLKLWI 42
           D   D+ D N+LK WI
Sbjct: 94  DWKMDQQDDNQLKQWI 109


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 26  SDLSQDKPDRNKLKLWITDQRIHG 49
           SD+    PD ++   WI +  I G
Sbjct: 635 SDIEDVDPDLHRSLTWILENNITG 658


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 19  TVKSEVPSDLSQDKPDR 35
           T K +VPS+  +  PDR
Sbjct: 782 TPKLDVPSEFKRTIPDR 798


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.129    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,268
Number of Sequences: 2123
Number of extensions: 929
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 53
length of database: 516,269
effective HSP length: 33
effective length of query: 20
effective length of database: 446,210
effective search space:  8924200
effective search space used:  8924200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)