Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002613-TA|BGIBMGA002613-PA|undefined
(115 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D receptor-inte... 30 2.0
BC031060-1|AAH31060.1| 852|Homo sapiens piwi-like 4 (Drosophila... 29 4.6
AK093475-1|BAC04179.1| 852|Homo sapiens protein ( Homo sapiens ... 29 4.6
AB079366-1|BAC81341.1| 852|Homo sapiens PIWIL1 protein. 29 4.6
X83973-1|CAA58807.1| 886|Homo sapiens transcription factor prot... 28 6.0
L25851-1|AAB59359.2| 1179|Homo sapiens integrin alpha E precurso... 28 6.0
BC117207-1|AAI17208.1| 1179|Homo sapiens integrin, alpha E (anti... 28 6.0
BC113436-1|AAI13437.1| 1179|Homo sapiens integrin, alpha E (anti... 28 6.0
BC104639-1|AAI04640.1| 229|Homo sapiens TTF1 protein protein. 28 6.0
BC062692-1|AAH62692.1| 229|Homo sapiens TTF1 protein protein. 28 6.0
BC050734-1|AAH50734.1| 338|Homo sapiens TTF1 protein protein. 28 6.0
AL353701-3|CAI94997.2| 905|Homo sapiens transcription terminati... 28 6.0
AF168787-6|AAF43107.1| 1127|Homo sapiens HUMINAE protein. 28 6.0
DQ480334-1|ABF19573.1| 350|Homo sapiens catecholamine-regulated... 28 8.0
>AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D
receptor-interacting protein protein.
Length = 873
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 8 TVSRITKEGEVAASTSQ--KLKSRVASNNVG-QEAGNIVKLTEEAFSSITPQDWQKQCEH 64
TVS + G+V ST +L++RVA ++ GNIV T + SS +P + K C
Sbjct: 189 TVSLLKPSGQVLTSTESLCRLRARVALADIAFTGGGNIVVATADG-SSASPVQFYKVCVS 247
Query: 65 V 65
V
Sbjct: 248 V 248
>BC031060-1|AAH31060.1| 852|Homo sapiens piwi-like 4 (Drosophila)
protein.
Length = 852
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 17 EVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLED 70
+++ T +KL + V + G +G VKL F+ PQDWQ HV ++ D
Sbjct: 82 DLSICTREKL-AHVRNCKTGS-SGIPVKLVTNLFNLDFPQDWQLYQYHVTYIPD 133
>AK093475-1|BAC04179.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ36156 fis, clone TESTI2025546, weakly similar to
Mus musculus mRNA for MIWI (piwi). ).
Length = 852
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 17 EVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLED 70
+++ T +KL + V + G +G VKL F+ PQDWQ HV ++ D
Sbjct: 82 DLSICTREKL-AHVRNCKTGS-SGIPVKLVTNLFNLDFPQDWQLYQYHVTYIPD 133
>AB079366-1|BAC81341.1| 852|Homo sapiens PIWIL1 protein.
Length = 852
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 17 EVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLED 70
+++ T +KL + V + G +G VKL F+ PQDWQ HV ++ D
Sbjct: 82 DLSICTREKL-AHVRNCKAGS-SGIPVKLVTNLFNLDFPQDWQLYQYHVTYIPD 133
>X83973-1|CAA58807.1| 886|Homo sapiens transcription factor
protein.
Length = 886
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 SRITKEGEVAASTSQKLKSR-VASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHV 65
SRI E A ST +K K R ++ V +EAG V L ++ + TP+ ++K + V
Sbjct: 70 SRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVV 126
>L25851-1|AAB59359.2| 1179|Homo sapiens integrin alpha E precursor
protein.
Length = 1179
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 37 QEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYER 75
+EAG + + + SI P D+Q+ + + ++ FYE+
Sbjct: 197 EEAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEK 235
>BC117207-1|AAI17208.1| 1179|Homo sapiens integrin, alpha E (antigen
CD103, human mucosal lymphocyte antigen 1; alpha pol
protein.
Length = 1179
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 37 QEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYER 75
+EAG + + + SI P D+Q+ + + ++ FYE+
Sbjct: 197 EEAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEK 235
>BC113436-1|AAI13437.1| 1179|Homo sapiens integrin, alpha E (antigen
CD103, human mucosal lymphocyte antigen 1; alpha pol
protein.
Length = 1179
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 37 QEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYER 75
+EAG + + + SI P D+Q+ + + ++ FYE+
Sbjct: 197 EEAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEK 235
>BC104639-1|AAI04640.1| 229|Homo sapiens TTF1 protein protein.
Length = 229
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 SRITKEGEVAASTSQKLKSR-VASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHV 65
SRI E A ST +K K R ++ V +EAG V L ++ + TP+ ++K + V
Sbjct: 70 SRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVV 126
>BC062692-1|AAH62692.1| 229|Homo sapiens TTF1 protein protein.
Length = 229
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 SRITKEGEVAASTSQKLKSR-VASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHV 65
SRI E A ST +K K R ++ V +EAG V L ++ + TP+ ++K + V
Sbjct: 70 SRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVV 126
>BC050734-1|AAH50734.1| 338|Homo sapiens TTF1 protein protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 SRITKEGEVAASTSQKLKSR-VASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHV 65
SRI E A ST +K K R ++ V +EAG V L ++ + TP+ ++K + V
Sbjct: 70 SRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVV 126
>AL353701-3|CAI94997.2| 905|Homo sapiens transcription termination
factor, RNA polymerase I protein.
Length = 905
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 SRITKEGEVAASTSQKLKSR-VASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHV 65
SRI E A ST +K K R ++ V +EAG V L ++ + TP+ ++K + V
Sbjct: 70 SRICDETANATSTLKKRKKRRYSALEVDEEAGVTVVLVDKENINNTPKHFRKDVDVV 126
>AF168787-6|AAF43107.1| 1127|Homo sapiens HUMINAE protein.
Length = 1127
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 37 QEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYER 75
+EAG + + + SI P D+Q+ + + ++ FYE+
Sbjct: 145 EEAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEK 183
>DQ480334-1|ABF19573.1| 350|Homo sapiens catecholamine-regulated
protein 40 protein.
Length = 350
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 3 GMSEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQD-WQKQ 61
G+S+ + + K E A ++ K RV + N+ + + + E F P D K
Sbjct: 219 GLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEGFKDQLPADECNKL 278
Query: 62 CEHVKHLEDKFYERDGCMDNITDKFI 87
E + + + +D D+ T + I
Sbjct: 279 KEEISKMRELLARKDSEKDSETGENI 304
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,807,054
Number of Sequences: 224733
Number of extensions: 371758
Number of successful extensions: 841
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 837
Number of HSP's gapped (non-prelim): 14
length of query: 115
length of database: 73,234,838
effective HSP length: 80
effective length of query: 35
effective length of database: 55,256,198
effective search space: 1933966930
effective search space used: 1933966930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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