Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002613-TA|BGIBMGA002613-PA|undefined
(115 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 3.3
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 l... 27 3.3
U55374-4|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 4.3
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 4.3
AC006733-6|AAF60489.2| 581|Caenorhabditis elegans Hypothetical ... 27 4.3
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z75956-4|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 26 7.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 26 7.6
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 26 7.6
U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical pr... 26 7.6
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 26 7.6
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 26 7.6
AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical ... 26 7.6
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 26 7.6
U97004-1|AAB52278.1| 94|Caenorhabditis elegans Hypothetical pr... 25 10.0
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 6 EKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTE 47
E + R KE E STS++LK++VA VGQ+ K E
Sbjct: 829 EPSTPRHHKEVE-EKSTSEELKAKVAGRQVGQKRNGAQKPEE 869
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 6 EKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTE 47
E + R KE E STS++LK++VA VGQ+ K E
Sbjct: 829 EPSTPRHHKEVE-EKSTSEELKAKVAGRQVGQKRNGAQKPEE 869
>AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 like
protein 6 protein.
Length = 190
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 4 MSEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVK 44
++EKT + K A+T +K+K V V ++ G+ VK
Sbjct: 108 VAEKTAATAKKPTVKKAATGEKVKKTVVKKTVAKKTGDKVK 148
>U55374-4|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 5 SEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEH 64
+E+ + + + E + + + R A+ + Q + TEE F + ++ +
Sbjct: 426 AEEVILKEDRTTEEEKAAIMEARRRAANKKLKQASKQQSTETEEDFEEDEDEMEEEYVDE 485
Query: 65 VKHLEDKFYERD--GCMDNITDKFIIELR 91
+ED+F ER GC ++ KFI +LR
Sbjct: 486 GGTVEDEFAERKKRGCCHSV-GKFIKQLR 513
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 5 SEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEH 64
+E+ + + + E + + + R A+ + Q + TEE F + ++ +
Sbjct: 426 AEEVILKEDRTTEEEKAAIMEARRRAANKKLKQASKQQSTETEEDFEEDEDEMEEEYVDE 485
Query: 65 VKHLEDKFYERD--GCMDNITDKFIIELR 91
+ED+F ER GC ++ KFI +LR
Sbjct: 486 GGTVEDEFAERKKRGCCHSV-GKFIKQLR 513
>AC006733-6|AAF60489.2| 581|Caenorhabditis elegans Hypothetical
protein Y32H12A.5 protein.
Length = 581
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 45 LTEEAFSSITPQDWQKQCEHVKHLEDKFYERDGCMDNITDKFIIELRN 92
+ E+ S TP + QK + K + + F ERD M D+ I+E RN
Sbjct: 1 MEEDDVESATPAESQKLLQ--KSVRNSFDERDMVMVLDNDELIMENRN 46
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 17 EVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYERD 76
++A L+ V +E+ ++ + EE +++ + EH+K L+ KF E
Sbjct: 1759 KLAEDRRNALEDAVCLYEYMRESADLGQSIEENLRVAMSEEFAEDYEHLKELQSKFDEFK 1818
Query: 77 GCMDNITDKF 86
+ N +++F
Sbjct: 1819 QKVKNGSERF 1828
>Z75956-4|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 17 EVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYERD 76
++A L+ V +E+ ++ + EE +++ + EH+K L+ KF E
Sbjct: 1759 KLAEDRRNALEDAVCLYEYMRESADLGQSIEENLRVAMSEEFAEDYEHLKELQSKFDEFK 1818
Query: 77 GCMDNITDKF 86
+ N +++F
Sbjct: 1819 QKVKNGSERF 1828
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 21 STSQKLKSRVASNNVGQEAGNIVKLTE 47
STS++LK++VA VGQ+ K E
Sbjct: 314 STSEELKAKVAGRQVGQKRNGAQKPEE 340
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 21 STSQKLKSRVASNNVGQEAGNIVKLTE 47
STS++LK++VA VGQ+ K E
Sbjct: 314 STSEELKAKVAGRQVGQKRNGAQKPEE 340
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 3 GMSEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSS 52
G SEKT++ G +A ++ + SNN GQ+ + EE S+
Sbjct: 70 GSSEKTINSAENPGMMAIPLARVVVVEDISNNEGQKKTTVDGSVEEKSST 119
>U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical
protein T24G10.2 protein.
Length = 347
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 11 RITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLT--EEAFSSITPQDWQKQCEHVKHL 68
R T EG A+ +K K + + ++ G + KL +T W K+C+ VK L
Sbjct: 166 RNTSEGGRFANNKKK-KVKDPNADMSGVFGPMTKLCYISTELQQVTKDQWMKRCDVVKAL 224
Query: 69 EDKFYERDGCMDNITDKFII 88
D + + + D ++II
Sbjct: 225 WD-YIKENNLKDPKNGQYII 243
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 3 GMSEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSS 52
G SEKT++ G +A ++ + SNN GQ+ + EE S+
Sbjct: 107 GSSEKTINSAENPGMMAIPLARVVVVEDISNNEGQKKTTVDGSVEEKSST 156
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 17 EVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQKQCEHVKHLEDKFYERD 76
++A L+ V +E+ ++ + EE +++ + EH+K L+ KF E
Sbjct: 1759 KLAEDRRNALEDAVCLYEYMRESADLGQSIEENLRVAMSEEFAEDYEHLKELQSKFDEFK 1818
Query: 77 GCMDNITDKF 86
+ N +++F
Sbjct: 1819 QKVKNGSERF 1828
>AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical
protein Y48G1BL.7 protein.
Length = 338
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 51 SSITPQDWQKQCEHVKHL-EDKFYERDGCMDNITDKFI 87
S PQ W ++CE HL + + ++ DG N T++ +
Sbjct: 230 SHFFPQSWYRRCEFSSHLVKYQIFQLDGA--NFTNQLL 265
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 3 GMSEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSS 52
G SEKT++ G +A ++ + SNN GQ+ + EE S+
Sbjct: 134 GSSEKTINSAENPGMMAIPLARVVVVEDISNNEGQKKTTVDGSVEEKSST 183
>U97004-1|AAB52278.1| 94|Caenorhabditis elegans Hypothetical
protein R08E5.4 protein.
Length = 94
Score = 25.4 bits (53), Expect = 10.0
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 1 MTGMSEKTVSRITKEGEVAASTSQKLKSRVASNNVGQEAGNIVKLTEEAFSSITPQDWQK 60
MT M ++ G A +S++ KS +S VG++ N K + W K
Sbjct: 1 MTDMDPSNMTGGPMNGHSAEKSSEEKKSPRSSRGVGEDLKNAGKDAMNTMENAGKNAWDK 60
Query: 61 QCE 63
E
Sbjct: 61 AGE 63
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,179,760
Number of Sequences: 27539
Number of extensions: 74215
Number of successful extensions: 164
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 152
Number of HSP's gapped (non-prelim): 17
length of query: 115
length of database: 12,573,161
effective HSP length: 72
effective length of query: 43
effective length of database: 10,590,353
effective search space: 455385179
effective search space used: 455385179
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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